FFCP PHASE1:Mm9::chr7:148455845..148455856,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:148455845..148455856,-
|short_description=p@chr7:148455845..148455856,-
|description=CAGE_peak_at_chr7:148455845..148455856,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=648 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:148455845..148455856,- | |||
|description=CAGE_peak_at_chr7:148455845..148455856,- | |||
|id=chr7:148455845..148455856,- | |||
|ontology_enrichment_celltype=CL:0000239!2.69e-11!6;CL:0000677!2.69e-11!6;CL:0000212!2.69e-11!6;CL:0000584!2.69e-11!6;CL:0002563!1.30e-09!9;CL:0002251!1.30e-09!9;CL:0000075!1.47e-09!7;CL:0000066!7.04e-07!25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.68e-28!43;UBERON:0005409!1.76e-21!59;UBERON:0000344!4.70e-20!15;UBERON:0001242!1.72e-16!13;UBERON:0000060!1.72e-16!13;UBERON:0001262!1.72e-16!13;UBERON:0004786!1.72e-16!13;UBERON:0004923!4.55e-13!24;UBERON:0003350!1.30e-09!9;UBERON:0004808!1.30e-09!9;UBERON:0001277!1.30e-09!9;UBERON:0001007!6.25e-09!128;UBERON:0001555!6.25e-09!128;UBERON:0007026!6.25e-09!128;UBERON:0004119!1.15e-08!130;UBERON:0000925!1.15e-08!130;UBERON:0006595!1.15e-08!130;UBERON:0000485!1.19e-07!11;UBERON:0004921!1.64e-07!126;UBERON:0004185!1.64e-07!126;UBERON:0000331!6.95e-07!3;UBERON:0002116!6.95e-07!3;UBERON:0001204!6.95e-07!3;UBERON:0001168!6.95e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.59e-31,31;UBERON:0005409,7.29e-20,47;UBERON:0000344,9.37e-14,15;UBERON:0001962,1.88e-12,2;UBERON:0001961,1.88e-12,2;UBERON:0001744,1.88e-12,2;UBERON:0001007,7.30e-10,116;UBERON:0001555,7.30e-10,116;UBERON:0007026,7.30e-10,116;UBERON:0004119,1.15e-09,118;UBERON:0000925,1.15e-09,118;UBERON:0006595,1.15e-09,118;UBERON:0002465,1.33e-08,3;UBERON:0004923,1.81e-08,24;UBERON:0001242,1.57e-07,13;UBERON:0001262,1.57e-07,13;UBERON:0004786,1.57e-07,13;UBERON:0004921,3.08e-07,114;UBERON:0002108,3.21e-07,4;UBERON:0003199,7.23e-07,1 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0.90739263392049,1.50268718983904,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.37645568640302,0,0.430761996159075,0.646413698057667,3.04037471130198,0.756090389279792,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,1.89811624617805,1.97638745668813,1.50801125280162,1.59165177632921,0.58489226135736,1.79763881730844,0.648414149624083,1.39398891278057,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.777689839750757,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0.90739263392049,1.50268718983904,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.37645568640302,0,0.430761996159075,0.646413698057667,3.04037471130198,0.756090389279792,0.886922042621219,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,1.89811624617805,1.97638745668813,1.50801125280162,1.59165177632921,0.58489226135736,1.79763881730844,0.648414149624083,1.39398891278057,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.777689839750757,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:148455845..148455856,- | |||
}} | }} |
Latest revision as of 12:32, 4 August 2015
Short description: | p@chr7:148455845..148455856, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148455845..148455856, - |
Coexpression cluster: | MCL_coexpression_mm9:648 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.59e-31 | 31 |
gastrointestinal system | 7.29e-20 | 47 |
mucosa | 9.37e-14 | 15 |
gut-associated lymphoid tissue | 1.88e-12 | 2 |
mucosa-associated lymphoid tissue | 1.88e-12 | 2 |
lymphoid tissue | 1.88e-12 | 2 |
digestive system | 7.30e-10 | 116 |
digestive tract | 7.30e-10 | 116 |
primitive gut | 7.30e-10 | 116 |
endoderm-derived structure | 1.15e-09 | 118 |
endoderm | 1.15e-09 | 118 |
presumptive endoderm | 1.15e-09 | 118 |
lymphoid system | 1.33e-08 | 3 |
organ component layer | 1.81e-08 | 24 |
intestinal mucosa | 1.57e-07 | 13 |
wall of intestine | 1.57e-07 | 13 |
gastrointestinal system mucosa | 1.57e-07 | 13 |
subdivision of digestive tract | 3.08e-07 | 114 |
small intestine | 3.21e-07 | 4 |
egg chamber | 7.23e-07 | 1 |