FFCP PHASE1:Mm9::chr6:129043369..129043373,-: Difference between revisions
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|id=chr6:129043369..129043373,-
|short_description=p@chr6:129043369..129043373,-
|description=CAGE_peak_at_chr6:129043369..129043373,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=648 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:129043369..129043373,- | |||
|description=CAGE_peak_at_chr6:129043369..129043373,- | |||
|id=chr6:129043369..129043373,- | |||
|ontology_enrichment_celltype=CL:0000239!1.19e-09!6;CL:0000677!1.19e-09!6;CL:0000212!1.19e-09!6;CL:0000584!1.19e-09!6;CL:0000075!3.98e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.76e-16,6;CL:0000677,1.76e-16,6;CL:0000584,1.76e-16,6;CL:0000075,4.76e-14,7;CL:0002563,8.45e-11,9;CL:0002251,8.45e-11,9;CL:0000682,4.56e-09,3;CL:0000066,1.12e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.16e-18!43;UBERON:0005409!1.08e-17!59;UBERON:0000344!3.68e-14!15;UBERON:0001242!3.24e-11!13;UBERON:0000060!3.24e-11!13;UBERON:0001262!3.24e-11!13;UBERON:0004786!3.24e-11!13;UBERON:0004923!1.24e-07!24;UBERON:0001007!3.82e-07!128;UBERON:0001555!3.82e-07!128;UBERON:0007026!3.82e-07!128;UBERON:0004119!6.79e-07!130;UBERON:0000925!6.79e-07!130;UBERON:0006595!6.79e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.67e-46,31;UBERON:0005409,9.73e-32,47;UBERON:0000344,6.74e-26,15;UBERON:0001242,2.18e-20,13;UBERON:0001262,2.18e-20,13;UBERON:0004786,2.18e-20,13;UBERON:0004923,2.81e-15,24;UBERON:0001007,2.17e-12,116;UBERON:0001555,2.17e-12,116;UBERON:0007026,2.17e-12,116;UBERON:0002108,3.99e-12,4;UBERON:0004119,4.33e-12,118;UBERON:0000925,4.33e-12,118;UBERON:0006595,4.33e-12,118;UBERON:0003350,8.45e-11,9;UBERON:0004808,8.45e-11,9;UBERON:0001277,8.45e-11,9;UBERON:0004921,3.61e-10,114;UBERON:0000331,3.29e-09,3;UBERON:0002116,3.29e-09,3;UBERON:0001204,3.29e-09,3;UBERON:0001168,3.29e-09,3;UBERON:0000485,9.93e-09,11;UBERON:0001962,1.87e-07,2;UBERON:0001961,1.87e-07,2;UBERON:0001744,1.87e-07,2 | |||
|phase1_expression=0,2.09385244583617,5.0049916332849,3.62957053568196,5.50985302940982,1.51091344720701,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.51964387129011,14.4527847072317,4.59385571292016,2.15380998079537,2.37018355954478,7.22088993934221,2.01624103807945,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,3.70230793328962,0,0,0,1.4117846723634,0.889512175379481,1.33157938278791,7.11793592316767,7.90554982675252,8.79673230800943,10.544693018181,5.26403035221624,6.29173586057955,14.9135254413539,9.95706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,9.91034844541493,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0.578727661391115,0,0.147198920134397,0.685738504770831,0.70990322463735,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,2.09385244583617,5.0049916332849,3.62957053568196,5.50985302940982,1.51091344720701,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.51964387129011,14.4527847072317,4.59385571292016,2.15380998079537,2.37018355954478,7.22088993934221,2.01624103807945,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,3.70230793328962,0,0,0,1.4117846723634,0.889512175379481,1.33157938278791,7.11793592316767,7.90554982675252,8.79673230800943,10.544693018181,5.26403035221624,6.29173586057955,14.9135254413539,9.95706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,9.91034844541493,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0,3.36998930558661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0.578727661391115,0,0.147198920134397,0.685738504770831,0.70990322463735,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr6:129043369..129043373,- | |||
}} | }} |
Latest revision as of 05:58, 5 August 2015
Short description: | p@chr6:129043369..129043373, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129043369..129043373, - |
Coexpression cluster: | MCL_coexpression_mm9:648 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.76e-16 | 6 |
gut absorptive cell | 1.76e-16 | 6 |
enterocyte | 1.76e-16 | 6 |
columnar/cuboidal epithelial cell | 4.76e-14 | 7 |
intestinal epithelial cell | 8.45e-11 | 9 |
epithelial cell of alimentary canal | 8.45e-11 | 9 |
M cell of gut | 4.56e-09 | 3 |
epithelial cell | 1.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.67e-46 | 31 |
gastrointestinal system | 9.73e-32 | 47 |
mucosa | 6.74e-26 | 15 |
intestinal mucosa | 2.18e-20 | 13 |
wall of intestine | 2.18e-20 | 13 |
gastrointestinal system mucosa | 2.18e-20 | 13 |
organ component layer | 2.81e-15 | 24 |
digestive system | 2.17e-12 | 116 |
digestive tract | 2.17e-12 | 116 |
primitive gut | 2.17e-12 | 116 |
small intestine | 3.99e-12 | 4 |
endoderm-derived structure | 4.33e-12 | 118 |
endoderm | 4.33e-12 | 118 |
presumptive endoderm | 4.33e-12 | 118 |
epithelium of mucosa | 8.45e-11 | 9 |
gastrointestinal system epithelium | 8.45e-11 | 9 |
intestinal epithelium | 8.45e-11 | 9 |
subdivision of digestive tract | 3.61e-10 | 114 |
ileal mucosa | 3.29e-09 | 3 |
ileum | 3.29e-09 | 3 |
mucosa of small intestine | 3.29e-09 | 3 |
wall of small intestine | 3.29e-09 | 3 |
simple columnar epithelium | 9.93e-09 | 11 |
gut-associated lymphoid tissue | 1.87e-07 | 2 |
mucosa-associated lymphoid tissue | 1.87e-07 | 2 |
lymphoid tissue | 1.87e-07 | 2 |