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FFCP PHASE1:Mm9::chr5:66728864..66728885,-: Difference between revisions

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(Created page with "{{FFCP |id=chr5:66728864..66728885,- |short_description=p5@Apbb2 |description=CAGE_peak_5_at_Apbb2_5end |association_with_transcript=16bp_to_ENSMUST00000160775_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr5:66728864..66728885,-
|DHSsupport=NA
|short_description=p5@Apbb2
|DPIdataset=NA
|description=CAGE_peak_5_at_Apbb2_5end
|association_with_transcript=16bp_to_ENSMUST00000160775_5end
|EntrezGene=11787
|EntrezGene=11787
|HGNC=
|HGNC=
|MCL_coexpression_id=53
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=16bp_to_ENSMUST00000160775_5end
|cluster_id=chr5:66728864..66728885,-
|description=CAGE_peak_5_at_Apbb2_5end
|id=chr5:66728864..66728885,-
|ontology_enrichment_celltype=CL:0000117!4.69e-11!23;CL:0000337!4.69e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.72e-18,23;CL:0000337,3.72e-18,23;CL:0000540,7.51e-11,33;CL:0000047,7.51e-11,33;CL:0000031,7.51e-11,33;CL:0000404,7.51e-11,33;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39;CL:0002609,1.61e-07,6;CL:0002319,4.59e-07,43;CL:0000221,8.69e-07,44;CL:0000133,8.69e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.21e-14!63;UBERON:0002346!5.13e-13!71;UBERON:0003075!5.13e-13!71;UBERON:0007284!5.13e-13!71;UBERON:0003056!1.92e-11!49;UBERON:0001049!4.14e-11!52;UBERON:0005068!4.14e-11!52;UBERON:0006241!4.14e-11!52;UBERON:0007135!4.14e-11!52;UBERON:0004121!3.60e-10!102;UBERON:0000924!3.60e-10!102;UBERON:0006601!3.60e-10!102;UBERON:0001017!1.49e-09!73;UBERON:0005743!1.49e-09!73;UBERON:0000955!3.02e-09!50;UBERON:0006238!3.02e-09!50;UBERON:0000073!6.04e-09!75;UBERON:0001016!6.04e-09!75;UBERON:0002616!7.33e-09!49;UBERON:0002020!2.33e-08!34;UBERON:0003080!5.31e-07!40;UBERON:0000020!6.41e-07!12;UBERON:0001032!6.41e-07!12;UBERON:0004456!6.41e-07!12;UBERON:0000153!7.46e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.56e-20,64;UBERON:0003075,8.56e-20,64;UBERON:0007284,8.56e-20,64;UBERON:0004121,3.46e-16,95;UBERON:0000924,3.46e-16,95;UBERON:0006601,3.46e-16,95;UBERON:0010371,5.79e-16,73;UBERON:0003056,4.91e-14,49;UBERON:0001049,1.07e-13,52;UBERON:0005068,1.07e-13,52;UBERON:0006241,1.07e-13,52;UBERON:0007135,1.07e-13,52;UBERON:0000073,1.47e-13,54;UBERON:0001017,9.44e-13,73;UBERON:0001016,3.81e-12,75;UBERON:0010314,4.00e-12,92;UBERON:0002020,2.73e-11,34;UBERON:0000970,4.06e-10,9;UBERON:0000019,4.06e-10,9;UBERON:0000047,4.06e-10,9;UBERON:0010312,4.06e-10,9;UBERON:0004088,4.06e-10,9;UBERON:0002104,4.06e-10,9;UBERON:0001456,4.06e-10,9;UBERON:0003072,4.06e-10,9;UBERON:0004128,4.06e-10,9;UBERON:0003071,4.06e-10,9;UBERON:0001444,1.26e-09,11;UBERON:0000955,2.29e-09,47;UBERON:0006238,2.29e-09,47;UBERON:0002616,9.10e-09,46;UBERON:0000020,1.26e-08,12;UBERON:0001032,1.26e-08,12;UBERON:0004456,1.26e-08,12;UBERON:0002240,1.70e-08,6;UBERON:0005174,1.70e-08,6;UBERON:0001137,1.70e-08,6;UBERON:0003076,1.86e-08,12;UBERON:0003057,1.86e-08,12;UBERON:0000033,8.77e-08,13;UBERON:0003080,1.79e-07,40;UBERON:0003528,3.92e-07,29;UBERON:0002791,3.92e-07,29;UBERON:0001893,3.92e-07,29;UBERON:0001948,4.29e-07,5;UBERON:0002315,4.29e-07,5;UBERON:0002780,8.17e-07,39;UBERON:0001890,8.17e-07,39;UBERON:0006240,8.17e-07,39
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,2.29226751951005,0.515672092277442,5.66486090406874,3.70293685490423,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,1.03689612308478,1.89008313664367,1.26194976810829,2.28520787523043,2.42955395046775,6.61450315760752,6.90087391331302,2.75765635983006,1.10115880999389,0.510749352340751,1.22885226604995,3.16527090552465,2.37867873366265,1.04182674111352,0.837548997004143,0,1.22238598221448,2.65165726926301,2.42031857358475,5.21918448310842,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,1.54488862144927,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0,0.883366073841574,0.484875253135222,0,1.46390398505774,0.83778682725382,0,0,0,0.127070227073065,2.24685959107234,1.37250180845588,6.40837195775608,1.04294592115366,0.255715457330331,3.74018480207208,3.56930778749067,0.407357455401265,0.870848794270651,0.505445516867349,1.05220927943237,0.520481771850815,9.65588838620586,18.546399369951,21.0986744970001,15.1721393107461,12.0426897067759,6.65282244374075,6.20888089773638,0.646703978798527,0.756424320671277,0.879755620819744,0.219195732427575,1.39023624612799,0,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.462801338662135,0,0.268273401399619,0.116765342367169,0.658239399653922,0.656669856316381,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.841159794256509,3.49875682089567,0,0,0.639864751605702,0.464473343720877,0.644337306610467,0.201683524623343,1.11189021922435,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0,0,0,0.518054945597687,0.144649058581512,0,0,0,0,6.90367536947505,10.1974167335217,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,1.28528526568723,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.776152102696527,0.214337035031592,1.06404140185364,0.356737635204141,0.822745103010605,0,0,0,0,0.16488625294148,0.484393280087717,0,0,0,0.874442509889552,17.0591277849669,0,0.82554747185289,0.185194527369712,0,0,0,0,0.419854356970974,0.276399947608848,0.954670618015114,0.316335993581135,0.203319467126849,0.972048067396211,1.04544148007234,1.9652630737156,1.75323650300267,1.07449492442937,2.6175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.234714477291508,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.405450430580328,0.924398614483445,0.51968329191118,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0.453142408984205,0,0.415149390336707,1.19707462020309,2.56100408631201,0.972426868273176,1.67690530102386,0.735374033800057,1.11123363900808,1.23621034343337,1.92551525755089,1.01078884705519,2.78827229879264,0.943131706930381,1.31098110457835,0.89635213366817,1.37845125493472,1.90517476513229,0.927074607558844,0.77163688185482,0,0.735994600671987,1.37147700954166,1.06485483695602,0.715308569841963,1.45346416632329,1.50575008664529,0.846146078916765,1.82927972872773,0.526139422875686,1.62964936615034,1.12228454331548,0.474540072496697,0.985044823755635,0,0.154936841185966,0.578719832943424,2.49810577937946,0.935726433781634,1.28922632428979,0.57386499620653,1.10295709559758,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,2.29226751951005,0.515672092277442,5.66486090406874,3.70293685490423,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,1.03689612308478,1.89008313664367,1.26194976810829,2.28520787523043,2.42955395046775,6.61450315760752,6.90087391331302,2.75765635983006,1.10115880999389,0.510749352340751,1.22885226604995,3.16527090552465,2.37867873366265,1.04182674111352,0.837548997004143,0,1.22238598221448,2.65165726926301,2.42031857358475,5.21918448310842,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,1.54488862144927,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0.884610551949874,0,0.883366073841574,0.484875253135222,0,1.46390398505774,0.83778682725382,0,0,0,0.127070227073065,2.24685959107234,1.37250180845588,6.40837195775608,1.04294592115366,0.255715457330331,3.74018480207208,3.56930778749067,0.407357455401265,0.870848794270651,0.505445516867349,1.05220927943237,0.520481771850815,9.65588838620586,18.546399369951,21.0986744970001,15.1721393107461,12.0426897067759,6.65282244374075,6.20888089773638,0.646703978798527,0.756424320671277,0.879755620819744,0.219195732427575,1.39023624612799,0,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.462801338662135,0,0.268273401399619,0.116765342367169,0.658239399653922,0.656669856316381,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.841159794256509,3.49875682089567,0,0,0.639864751605702,0.464473343720877,0.644337306610467,0.201683524623343,1.11189021922435,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0.147610147979602,0.470996183524124,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0,0,0,0.518054945597687,0.144649058581512,0,0,0,0,6.90367536947505,10.1974167335217,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,1.28528526568723,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.540183282093931,0.776152102696527,0.214337035031592,1.06404140185364,0.356737635204141,0.822745103010605,0,0,0,0,0.16488625294148,0.484393280087717,0,0,0,0.874442509889552,17.0591277849669,0,0.82554747185289,0.185194527369712,0,0,0,0,0.419854356970974,0.276399947608848,0.954670618015114,0.316335993581135,0.203319467126849,0.972048067396211,1.04544148007234,1.9652630737156,1.75323650300267,1.07449492442937,2.6175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.234714477291508,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.405450430580328,0.924398614483445,0.51968329191118,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0.453142408984205,0,0.415149390336707,1.19707462020309,2.56100408631201,0.972426868273176,1.67690530102386,0.735374033800057,1.11123363900808,1.23621034343337,1.92551525755089,1.01078884705519,2.78827229879264,0.943131706930381,1.31098110457835,0.89635213366817,1.37845125493472,1.90517476513229,0.927074607558844,0.77163688185482,0,0.735994600671987,1.37147700954166,1.06485483695602,0.715308569841963,1.45346416632329,1.50575008664529,0.846146078916765,1.82927972872773,0.526139422875686,1.62964936615034,1.12228454331548,0.474540072496697,0.985044823755635,0,0.154936841185966,0.578719832943424,2.49810577937946,0.935726433781634,1.28922632428979,0.57386499620653,1.10295709559758,0.231867835620421
|short_description=p5@Apbb2
}}
}}

Latest revision as of 04:07, 26 September 2015

Short description:p5@Apbb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Apbb2_5end
Coexpression cluster:MCL_coexpression_mm9:53
Association with transcript: 16bp_to_ENSMUST00000160775_5end
EntrezGene:Apbb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Apbb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C918.55
eyeball, embryo E17.CNhs11023.1261-18D421.10
eyeball, neonate N00.CNhs11207.633-15C615.17
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A310.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm8.56e-2064
neural plate8.56e-2064
presumptive neural plate8.56e-2064
ectoderm-derived structure3.46e-1695
ectoderm3.46e-1695
presumptive ectoderm3.46e-1695
ecto-epithelium5.79e-1673
pre-chordal neural plate4.91e-1449
neural tube1.07e-1352
neural rod1.07e-1352
future spinal cord1.07e-1352
neural keel1.07e-1352
regional part of nervous system1.47e-1354
central nervous system9.44e-1373
nervous system3.81e-1275
structure with developmental contribution from neural crest4.00e-1292
gray matter2.73e-1134
eye4.06e-109
camera-type eye4.06e-109
simple eye4.06e-109
immature eye4.06e-109
ocular region4.06e-109
visual system4.06e-109
face4.06e-109
optic cup4.06e-109
optic vesicle4.06e-109
eye primordium4.06e-109
subdivision of head1.26e-0911
brain2.29e-0947
future brain2.29e-0947
regional part of brain9.10e-0946
sense organ1.26e-0812
sensory system1.26e-0812
entire sense organ system1.26e-0812
spinal cord1.70e-086
dorsal region element1.70e-086
dorsum1.70e-086
posterior neural tube1.86e-0812
chordal neural plate1.86e-0812
head8.77e-0813
anterior neural tube1.79e-0740
brain grey matter3.92e-0729
regional part of telencephalon3.92e-0729
telencephalon3.92e-0729
regional part of spinal cord4.29e-075
gray matter of spinal cord4.29e-075
regional part of forebrain8.17e-0739
forebrain8.17e-0739
future forebrain8.17e-0739
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