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FFCP PHASE1:Mm9::chr5:151062388..151062404,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:151062388..151062404,+
|DHSsupport=NA
|short_description=p6@Fry
|DPIdataset=NA
|description=CAGE_peak_6_at_Fry_5end
|association_with_transcript=-100bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|EntrezGene=320365
|EntrezGene=320365
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|association_with_transcript=-100bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|cluster_id=chr5:151062388..151062404,+
|description=CAGE_peak_6_at_Fry_5end
|id=chr5:151062388..151062404,+
|ontology_enrichment_celltype=CL:0000117!3.95e-15!23;CL:0000337!3.95e-15!23;CL:0000540!5.70e-14!33;CL:0000047!5.70e-14!33;CL:0000031!5.70e-14!33;CL:0000404!5.70e-14!33;CL:0000393!1.55e-09!39;CL:0000211!1.55e-09!39;CL:0000221!7.07e-08!44;CL:0000133!7.07e-08!44;CL:0002319!9.62e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-28,23;CL:0000337,4.31e-28,23;CL:0000540,1.08e-20,33;CL:0000047,1.08e-20,33;CL:0000031,1.08e-20,33;CL:0000404,1.08e-20,33;CL:0000393,2.45e-16,39;CL:0000211,2.45e-16,39;CL:0002319,3.96e-14,43;CL:0000221,1.22e-13,44;CL:0000133,1.22e-13,44;CL:0002609,2.82e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.37e-23!73;UBERON:0005743!4.37e-23!73;UBERON:0004121!1.35e-22!102;UBERON:0000924!1.35e-22!102;UBERON:0006601!1.35e-22!102;UBERON:0000073!4.19e-22!75;UBERON:0001016!4.19e-22!75;UBERON:0001049!1.15e-21!52;UBERON:0005068!1.15e-21!52;UBERON:0006241!1.15e-21!52;UBERON:0007135!1.15e-21!52;UBERON:0000955!1.82e-20!50;UBERON:0006238!1.82e-20!50;UBERON:0000033!8.01e-20!63;UBERON:0002616!9.45e-20!49;UBERON:0002020!1.73e-19!34;UBERON:0002346!2.16e-19!71;UBERON:0003075!2.16e-19!71;UBERON:0007284!2.16e-19!71;UBERON:0003080!7.18e-18!40;UBERON:0002780!2.19e-17!39;UBERON:0001890!2.19e-17!39;UBERON:0006240!2.19e-17!39;UBERON:0002791!1.47e-16!29;UBERON:0003528!1.47e-16!29;UBERON:0001893!1.47e-16!29;UBERON:0003056!5.09e-16!49;UBERON:0000956!1.04e-11!21;UBERON:0001869!1.04e-11!21;UBERON:0000203!1.04e-11!21;UBERON:0002619!3.51e-09!17;UBERON:0000153!7.76e-09!94;UBERON:0007811!1.14e-08!86;UBERON:0002021!7.60e-08!10;UBERON:0000411!7.60e-08!10;UBERON:0001950!7.60e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.15e-38,34;UBERON:0000073,2.82e-38,54;UBERON:0001017,3.85e-37,73;UBERON:0001049,4.05e-36,52;UBERON:0005068,4.05e-36,52;UBERON:0006241,4.05e-36,52;UBERON:0007135,4.05e-36,52;UBERON:0001016,9.06e-36,75;UBERON:0003528,1.30e-32,29;UBERON:0002791,1.30e-32,29;UBERON:0001893,1.30e-32,29;UBERON:0000955,1.18e-30,47;UBERON:0006238,1.18e-30,47;UBERON:0004121,2.00e-30,95;UBERON:0000924,2.00e-30,95;UBERON:0006601,2.00e-30,95;UBERON:0002616,2.45e-29,46;UBERON:0003080,1.19e-28,40;UBERON:0002780,1.01e-27,39;UBERON:0001890,1.01e-27,39;UBERON:0006240,1.01e-27,39;UBERON:0002346,4.83e-27,64;UBERON:0003075,4.83e-27,64;UBERON:0007284,4.83e-27,64;UBERON:0010371,1.11e-24,73;UBERON:0000956,4.97e-23,21;UBERON:0001869,4.97e-23,21;UBERON:0000203,4.97e-23,21;UBERON:0003056,1.41e-21,49;UBERON:0002619,4.96e-18,17;UBERON:0010314,4.25e-17,92;UBERON:0002021,7.70e-14,10;UBERON:0000411,7.70e-14,10;UBERON:0001950,7.70e-14,10;UBERON:0004111,8.43e-11,122;UBERON:0000025,8.56e-11,114;UBERON:0002420,1.76e-10,8;UBERON:0007245,1.76e-10,8;UBERON:0010009,1.76e-10,8;UBERON:0010011,1.76e-10,8;UBERON:0000454,1.76e-10,8;UBERON:0002240,1.03e-07,6;UBERON:0005174,1.03e-07,6;UBERON:0001137,1.03e-07,6;UBERON:0003076,1.06e-07,12;UBERON:0003057,1.06e-07,12;UBERON:0000369,3.34e-07,5;UBERON:0002435,3.34e-07,5;UBERON:0000204,3.34e-07,5;UBERON:0010082,3.34e-07,5;UBERON:0001948,9.92e-07,5;UBERON:0002315,9.92e-07,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,2.07379224616955,3.51015439662396,2.73422449756797,1.99955689082663,1.54607978666129,4.89963196859816,4.98396449294829,6.43453150627015,2.20231761998777,2.42605942361857,1.22885226604995,2.63772575460388,4.66586982372289,1.04182674111352,1.67509799400829,2.8138130501584,3.0559649555362,2.06240009831567,3.70166370077668,2.23679334990361,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0,0,0,2.63502717310392,3.35114730901528,0,0,0,0,1.3481157546434,2.28750301409313,9.67538511269056,5.38855392596057,5.37002460393694,2.49345653471472,2.27137768294861,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.756424320671277,0.175951124163949,0.219195732427575,0,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,5.46753866266731,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.52375192569864,0,0,0.94652465824877,0,0.430846795465598,0,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,0.395287777946524,3.85585579706168,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,1.13025098687134,1.08563264870681,0.716234064018819,0.820704498725306,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,3.3885110557024,1.84130094602871,4.58316410751517,4.81188910562325,7.53590771747707,1.5107877947794,4.72515750162264,3.15224842256954,2.71885445390523,3.62432218226274,0.415149390336707,0.798049746802062,1.36586884603307,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,0.561849044819294,1.34452820050225,1.32101578597911,0.952587382566147,0.927074607558844,1.35036454324594,0.412085900803307,1.17759136107518,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,1.57841826862706,0.814824683075171,0.561142271657738,1.42362021749009,0.492522411877817,0,0.929621047115796,1.15743966588685,3.2475375131933,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,2.07379224616955,3.51015439662396,2.73422449756797,1.99955689082663,1.54607978666129,4.89963196859816,4.98396449294829,6.43453150627015,2.20231761998777,2.42605942361857,1.22885226604995,2.63772575460388,4.66586982372289,1.04182674111352,1.67509799400829,2.8138130501584,3.0559649555362,2.06240009831567,3.70166370077668,2.23679334990361,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0,0,0,2.63502717310392,3.35114730901528,0,0,0,0,1.3481157546434,2.28750301409313,9.67538511269056,5.38855392596057,5.37002460393694,2.49345653471472,2.27137768294861,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.756424320671277,0.175951124163949,0.219195732427575,0,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,5.46753866266731,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.52375192569864,0,0,0.94652465824877,0,0.430846795465598,0,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,0.395287777946524,3.85585579706168,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,1.13025098687134,1.08563264870681,0.716234064018819,0.820704498725306,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,3.3885110557024,1.84130094602871,4.58316410751517,4.81188910562325,7.53590771747707,1.5107877947794,4.72515750162264,3.15224842256954,2.71885445390523,3.62432218226274,0.415149390336707,0.798049746802062,1.36586884603307,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,0.561849044819294,1.34452820050225,1.32101578597911,0.952587382566147,0.927074607558844,1.35036454324594,0.412085900803307,1.17759136107518,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,1.57841826862706,0.814824683075171,0.561142271657738,1.42362021749009,0.492522411877817,0,0.929621047115796,1.15743966588685,3.2475375131933,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p6@Fry
}}
}}

Latest revision as of 19:00, 25 September 2015

Short description:p6@Fry
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Fry_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -100bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end
EntrezGene:Fry
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Fry

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.15e-3834
regional part of nervous system2.82e-3854
central nervous system3.85e-3773
neural tube4.05e-3652
neural rod4.05e-3652
future spinal cord4.05e-3652
neural keel4.05e-3652
nervous system9.06e-3675
brain grey matter1.30e-3229
regional part of telencephalon1.30e-3229
telencephalon1.30e-3229
brain1.18e-3047
future brain1.18e-3047
ectoderm-derived structure2.00e-3095
ectoderm2.00e-3095
presumptive ectoderm2.00e-3095
regional part of brain2.45e-2946
anterior neural tube1.19e-2840
regional part of forebrain1.01e-2739
forebrain1.01e-2739
future forebrain1.01e-2739
neurectoderm4.83e-2764
neural plate4.83e-2764
presumptive neural plate4.83e-2764
ecto-epithelium1.11e-2473
cerebral cortex4.97e-2321
cerebral hemisphere4.97e-2321
pallium4.97e-2321
pre-chordal neural plate1.41e-2149
regional part of cerebral cortex4.96e-1817
structure with developmental contribution from neural crest4.25e-1792
occipital lobe7.70e-1410
visual cortex7.70e-1410
neocortex7.70e-1410
anatomical conduit8.43e-11122
tube8.56e-11114
basal ganglion1.76e-108
nuclear complex of neuraxis1.76e-108
aggregate regional part of brain1.76e-108
collection of basal ganglia1.76e-108
cerebral subcortex1.76e-108
spinal cord1.03e-076
dorsal region element1.03e-076
dorsum1.03e-076
posterior neural tube1.06e-0712
chordal neural plate1.06e-0712
corpus striatum3.34e-075
striatum3.34e-075
ventral part of telencephalon3.34e-075
future corpus striatum3.34e-075
regional part of spinal cord9.92e-075
gray matter of spinal cord9.92e-075
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