FFCP PHASE1:Mm9::chr4:147315035..147315040,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:147315035..147315040,+
|short_description=p2@2510039O18Rik
|description=CAGE_peak_2_at_2510039O18Rik_5end
|association_with_transcript=31bp_to_ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77034 | |EntrezGene=77034 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1569 | |||
|TSSclassifier=NA | |||
|UniProt=Q91X21 | |UniProt=Q91X21 | ||
|association_with_transcript=31bp_to_ENSMUST00000103232,NM_029841,uc008vtm.1,uc008vtn.1_5end | |||
|cluster_id=chr4:147315035..147315040,+ | |||
|description=CAGE_peak_2_at_2510039O18Rik_5end | |||
|id=chr4:147315035..147315040,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.96e-22,6;CL:0000677,6.96e-22,6;CL:0000584,6.96e-22,6;CL:0000075,1.10e-18,7;CL:0002563,2.05e-14,9;CL:0002251,2.05e-14,9;CL:0000682,5.33e-12,3;CL:0000066,1.03e-10,25;CL:0002076,2.04e-08,15;CL:0000791,5.04e-07,9;CL:0000789,5.04e-07,9;CL:0002420,5.04e-07,9;CL:0002419,5.04e-07,9;CL:0000790,5.04e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.41e-10!24;UBERON:0000344!6.97e-10!15;UBERON:0001242!1.50e-08!13;UBERON:0000060!1.50e-08!13;UBERON:0001262!1.50e-08!13;UBERON:0004786!1.50e-08!13;UBERON:0004119!3.23e-07!130;UBERON:0000925!3.23e-07!130;UBERON:0006595!3.23e-07!130;UBERON:0004177!3.67e-07!29;UBERON:0003408!3.72e-07!24;UBERON:0001007!7.70e-07!128;UBERON:0001555!7.70e-07!128;UBERON:0007026!7.70e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.77e-32,15;UBERON:0001242,5.86e-26,13;UBERON:0001262,5.86e-26,13;UBERON:0004786,5.86e-26,13;UBERON:0004923,3.15e-19,24;UBERON:0003350,2.05e-14,9;UBERON:0004808,2.05e-14,9;UBERON:0001277,2.05e-14,9;UBERON:0000485,1.08e-11,11;UBERON:0000331,1.88e-10,3;UBERON:0002116,1.88e-10,3;UBERON:0001204,1.88e-10,3;UBERON:0001168,1.88e-10,3;UBERON:0000160,6.48e-10,31;UBERON:0002108,5.79e-08,4;UBERON:0001962,7.88e-08,2;UBERON:0001961,7.88e-08,2;UBERON:0001744,7.88e-08,2 | |||
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| |phase1_expression=0,1.74487703819681,2.72999543633722,3.32710632437513,4.00716583957078,1.34303417529512,1.40167584357315,0.258246646883153,3.09735188733667,3.27690336850791,0.513653904676515,0.319088635981346,0.171200729931206,0.611942816932982,0.333109761815663,0,0.699561878128147,0.157731082679119,0,0,0.425216450755349,0.496454756004426,0.522399578277871,1.11994695955385,1.83527424853736,2.8711598205751,3.01533397311352,1.939241094173,1.33016393619462,1.00812051903972,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.612508068787107,1.25559489221072,0,0.523523743973798,0.588231488031014,0.683045484958446,2.42755176515577,0,0,0,0,0.218025156380447,0,0,0,0,0.838913030288682,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0.11981512450592,1.79970819298022,0.127070227073065,0,0,0.251308704225729,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0.229902104433473,0.360124259610698,0,0,0,0.0937017245597288,0,0.431135985865684,0.378212160335639,0,0.43839146485515,0,0,0.205782136407943,0.398068533636986,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.804820204198858,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0,0,2.64335026387038,0,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0,0.58489226135736,0,0.864552199498777,0.796565093017469,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0,0,0,1.47529281905711,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0.445597348164788,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.709360934569094,0.178368817602071,0.822745103010605,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0.120625849856312,0,0.164140899745061,0.582961673259701,0,0.683483523191411,0,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.339956859987711,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.389762468933385,0.716106782669926,1.19208812868759,0.721172697119813,0.590758108698309,0.403865799792591,0.381034033274999,0.705783295957884,0.779663045918019,0.865906574762965,0.818138315270983,0,0,0.0897138566094757,0.671538465456314,0,0.563047426353546,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.29551344712669,0,0,0,0.749431733813838,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p2@2510039O18Rik | |||
}} | }} |
Latest revision as of 16:56, 26 September 2015
Short description: | p2@2510039O18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2510039O18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1569 |
Association with transcript: | 31bp_to_ENSMUST00000103232, NM_029841, uc008vtm.1, uc008vtn.1_5end |
EntrezGene: | 2510039O18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.96e-22 | 6 |
gut absorptive cell | 6.96e-22 | 6 |
enterocyte | 6.96e-22 | 6 |
columnar/cuboidal epithelial cell | 1.10e-18 | 7 |
intestinal epithelial cell | 2.05e-14 | 9 |
epithelial cell of alimentary canal | 2.05e-14 | 9 |
M cell of gut | 5.33e-12 | 3 |
epithelial cell | 1.03e-10 | 25 |
endo-epithelial cell | 2.04e-08 | 15 |
mature alpha-beta T cell | 5.04e-07 | 9 |
alpha-beta T cell | 5.04e-07 | 9 |
immature T cell | 5.04e-07 | 9 |
mature T cell | 5.04e-07 | 9 |
immature alpha-beta T cell | 5.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.77e-32 | 15 |
intestinal mucosa | 5.86e-26 | 13 |
wall of intestine | 5.86e-26 | 13 |
gastrointestinal system mucosa | 5.86e-26 | 13 |
organ component layer | 3.15e-19 | 24 |
epithelium of mucosa | 2.05e-14 | 9 |
gastrointestinal system epithelium | 2.05e-14 | 9 |
intestinal epithelium | 2.05e-14 | 9 |
simple columnar epithelium | 1.08e-11 | 11 |
ileal mucosa | 1.88e-10 | 3 |
ileum | 1.88e-10 | 3 |
mucosa of small intestine | 1.88e-10 | 3 |
wall of small intestine | 1.88e-10 | 3 |
intestine | 6.48e-10 | 31 |
small intestine | 5.79e-08 | 4 |
gut-associated lymphoid tissue | 7.88e-08 | 2 |
mucosa-associated lymphoid tissue | 7.88e-08 | 2 |
lymphoid tissue | 7.88e-08 | 2 |