FFCP PHASE1:Mm9::chr3:95392957..95392966,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:95392957..95392966,+
|short_description=p4@Golph3l
|description=CAGE_peak_4_at_Golph3l_5end
|association_with_transcript=76bp_to_ENSMUST00000060323,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=229593 | |EntrezGene=229593 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3433 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R088 | |UniProt=Q8R088 | ||
|association_with_transcript=76bp_to_ENSMUST00000060323,ENSMUST00000098861_5end | |||
|cluster_id=chr3:95392957..95392966,+ | |||
|description=CAGE_peak_4_at_Golph3l_5end | |||
|id=chr3:95392957..95392966,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.91e-11,9;CL:0002251,1.91e-11,9;CL:0000239,1.92e-10,6;CL:0000677,1.92e-10,6;CL:0000584,1.92e-10,6;CL:0000075,8.11e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.23e-24!59;UBERON:0000160!2.19e-21!43;UBERON:0004119!2.27e-13!130;UBERON:0000925!2.27e-13!130;UBERON:0006595!2.27e-13!130;UBERON:0001007!6.97e-13!128;UBERON:0001555!6.97e-13!128;UBERON:0007026!6.97e-13!128;UBERON:0004921!7.94e-12!126;UBERON:0004185!7.94e-12!126;UBERON:0004923!1.29e-11!24;UBERON:0000344!1.35e-10!15;UBERON:0001242!3.47e-09!13;UBERON:0000060!3.47e-09!13;UBERON:0001262!3.47e-09!13;UBERON:0004786!3.47e-09!13;UBERON:0002108!6.11e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.04e-37,31;UBERON:0005409,1.30e-29,47;UBERON:0000344,1.95e-21,15;UBERON:0001242,5.32e-18,13;UBERON:0001262,5.32e-18,13;UBERON:0004786,5.32e-18,13;UBERON:0004923,1.78e-15,24;UBERON:0003350,1.91e-11,9;UBERON:0004808,1.91e-11,9;UBERON:0001277,1.91e-11,9;UBERON:0004119,9.25e-11,118;UBERON:0000925,9.25e-11,118;UBERON:0006595,9.25e-11,118;UBERON:0001007,2.56e-10,116;UBERON:0001555,2.56e-10,116;UBERON:0007026,2.56e-10,116;UBERON:0000485,4.57e-09,11;UBERON:0004921,8.58e-09,114;UBERON:0002108,9.10e-08,4 | |||
|phase1_expression=0,3.14077866875425,2.72999543633722,2.11724947914781,2.50447864973174,2.68606835059024,2.33612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0.473193248037357,0.137114433605739,0.42438965179803,0.425216450755349,0.0992909512008853,0,3.99981056983517,3.89995777814189,0.57423196411502,3.4460959692726,4.09395342103189,5.70070258369122,3.78045194639896,3.32595765982957,0,0,0,1.73310971850765,1.99481574430191,0.612508068787107,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0,0.194429899074283,0,0,0,0,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0.127687338085188,0,0,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.5709193985953,0.517875767294343,0.148442139064825,0.346970653532272,0,0.691846491768175,0.452167921657868,0.117588707135705,0.125666591329675,1.48316980640624,0.433798070759735,0,0.161766849947409,0.220841518460394,0,5.59175283654366,0,0,1.53274233125155,0.718890747035522,0,0.635351135365324,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0.702213187313235,1.02939162845886,1.13665399758237,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.536825675041487,0,0,3.30418782983798,1.58670339998127,0.426576501070468,0.232236671860439,1.03093969057675,2.01683524623343,1.55664630691409,1.14135375667535,1.89811624617805,1.15289268306808,1.50801125280162,1.79060824837036,1.36474860983384,3.59527763461689,3.8904848977445,4.77939055810481,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.295220295959204,0,0.246794327843601,0.296452627087149,0.166845105716094,0.786235980452812,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0,0,0,0,0.624075346229121,0,0.358794827043824,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0,0.502518772325447,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,3.01582567878545,2.71952841909355,0.983528546038072,3.58717770196152,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,0,0.425820255624806,0,0,0.164970122972535,2.65490276679926,0.242780636154981,0,1.88605079755898,2.06711325016541,1.22974059177571,1.55056975900933,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,1.70219802876894,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,1.0591603543191,0.661585194164886,0,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,1.45740418314925,0,0.512612642393558,0.619160603889667,0.555583582109135,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0.552799895217695,0,0.316335993581135,0.609958401380546,0.432021363287205,1.25452977608681,0.655087691238533,0.404593039154462,1.23980183588004,1.04702376793612,8.03612834409116,2.4853572523477,0,0.448549638131936,0.330916980914195,0.388902376688095,0.129159823477731,0,0.352071715937262,1.0416350787516,0,0,0,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0.167884616364078,0,0.563047426353546,1.09890974560359,0.214368379079066,4.01257683228291,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 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| ||
|short_description=p4@Golph3l | |||
}} | }} |
Latest revision as of 23:36, 25 September 2015
Short description: | p4@Golph3l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Golph3l_5end |
Coexpression cluster: | MCL_coexpression_mm9:3433 |
Association with transcript: | 76bp_to_ENSMUST00000060323, ENSMUST00000098861_5end |
EntrezGene: | Golph3l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.91e-11 | 9 |
epithelial cell of alimentary canal | 1.91e-11 | 9 |
brush border epithelial cell | 1.92e-10 | 6 |
gut absorptive cell | 1.92e-10 | 6 |
enterocyte | 1.92e-10 | 6 |
columnar/cuboidal epithelial cell | 8.11e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.04e-37 | 31 |
gastrointestinal system | 1.30e-29 | 47 |
mucosa | 1.95e-21 | 15 |
intestinal mucosa | 5.32e-18 | 13 |
wall of intestine | 5.32e-18 | 13 |
gastrointestinal system mucosa | 5.32e-18 | 13 |
organ component layer | 1.78e-15 | 24 |
epithelium of mucosa | 1.91e-11 | 9 |
gastrointestinal system epithelium | 1.91e-11 | 9 |
intestinal epithelium | 1.91e-11 | 9 |
endoderm-derived structure | 9.25e-11 | 118 |
endoderm | 9.25e-11 | 118 |
presumptive endoderm | 9.25e-11 | 118 |
digestive system | 2.56e-10 | 116 |
digestive tract | 2.56e-10 | 116 |
primitive gut | 2.56e-10 | 116 |
simple columnar epithelium | 4.57e-09 | 11 |
subdivision of digestive tract | 8.58e-09 | 114 |
small intestine | 9.10e-08 | 4 |