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FFCP PHASE1:Mm9::chr3:59235156..59235161,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:59235156..59235161,+
|DHSsupport=NA
|short_description=p@chr3:59235156..59235161,+
|DPIdataset=NA
|description=CAGE_peak_at_chr3:59235156..59235161,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=81
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr3:59235156..59235161,+
|description=CAGE_peak_at_chr3:59235156..59235161,+
|id=chr3:59235156..59235161,+
|ontology_enrichment_celltype=CL:0000063!2.68e-19!66;CL:0000144!9.73e-13!121;CL:0000012!9.73e-13!121;CL:0000988!4.72e-12!32;CL:0002032!4.72e-12!32;CL:0000037!4.72e-12!32;CL:0000566!4.72e-12!32;CL:0000837!4.72e-12!32;CL:0002371!1.77e-11!118;CL:0002031!2.18e-11!25;CL:0000548!1.99e-10!115;CL:0000004!1.99e-10!115;CL:0000255!1.99e-10!115;CL:0002320!1.84e-09!46;CL:0000134!1.84e-09!46;CL:0000066!3.16e-09!25;CL:0002076!3.27e-09!15;CL:0000219!9.01e-09!54;CL:0000838!2.29e-08!12;CL:0000738!5.91e-08!17;CL:0002087!5.91e-08!17;CL:0000084!9.80e-08!11;CL:0000827!9.80e-08!11;CL:0000791!1.04e-07!9;CL:0000789!1.04e-07!9;CL:0002420!1.04e-07!9;CL:0002419!1.04e-07!9;CL:0000790!1.04e-07!9;CL:0000223!2.88e-07!20;CL:0000542!2.99e-07!13;CL:0000051!2.99e-07!13;CL:0000624!5.99e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000988,1.73e-23,32;CL:0002032,1.73e-23,32;CL:0000037,1.73e-23,32;CL:0000837,1.73e-23,32;CL:0002031,8.14e-21,25;CL:0002320,5.44e-20,46;CL:0000134,5.44e-20,46;CL:0000219,6.76e-20,54;CL:0000066,6.05e-17,25;CL:0002076,1.68e-16,15;CL:0000034,4.97e-15,97;CL:0000838,2.07e-14,12;CL:0000791,1.41e-13,9;CL:0000789,1.41e-13,9;CL:0002420,1.41e-13,9;CL:0002419,1.41e-13,9;CL:0000790,1.41e-13,9;CL:0000738,2.07e-13,17;CL:0002087,2.07e-13,17;CL:0000084,3.50e-13,11;CL:0000827,3.50e-13,11;CL:0000223,4.12e-13,20;CL:0000542,4.72e-13,13;CL:0000051,4.72e-13,13;CL:0000624,4.27e-12,8;CL:0000049,1.12e-11,19;CL:0000723,1.34e-10,91;CL:0000048,1.34e-10,91;CL:0002563,1.02e-09,9;CL:0002251,1.02e-09,9;CL:0000893,1.41e-09,6;CL:0002489,1.41e-09,6;CL:0000898,1.41e-09,6;CL:0000809,1.41e-09,6;CL:0000810,1.41e-09,6;CL:0000895,1.41e-09,6;CL:0000808,1.41e-09,6;CL:0000894,1.41e-09,6;CL:0000806,1.41e-09,6;CL:0000807,1.41e-09,6;CL:0000805,1.41e-09,6;CL:0002425,1.41e-09,6;CL:0002436,1.41e-09,6;CL:0002427,1.41e-09,6;CL:0002428,1.41e-09,6;CL:0002429,1.41e-09,6;CL:0002433,1.41e-09,6;CL:0002431,1.41e-09,6;CL:0002432,1.41e-09,6;CL:0000763,4.24e-09,16;CL:0000839,3.40e-08,13;CL:0000075,5.77e-08,7;CL:0000050,1.48e-07,9;CL:0000239,2.92e-07,6;CL:0000677,2.92e-07,6;CL:0000584,2.92e-07,6;CL:0000553,9.60e-07,6;CL:0000556,9.60e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!1.84e-09!46;UBERON:0000344!1.86e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.44e-20,46;UBERON:0000344,8.11e-14,15;UBERON:0001242,2.12e-11,13;UBERON:0001262,2.12e-11,13;UBERON:0004786,2.12e-11,13;UBERON:0000485,4.45e-11,11;UBERON:0003350,1.02e-09,9;UBERON:0004808,1.02e-09,9;UBERON:0001277,1.02e-09,9;UBERON:0002193,1.09e-07,48;UBERON:0002405,1.09e-07,48;UBERON:0004923,2.56e-07,24
|phase1_expression=1.28119077683835,4.53668029931169,6.3699893514535,20.5675663688644,22.5403078475856,6.88305014838748,39.4805362606438,26.0829113351984,63.6365024125534,51.2601312645166,68.6584052584275,36.8547374558454,52.5586240888802,32.607810102286,0,90.9113950580319,83.9474253753776,41.4832747446083,36.198210471915,33.1023928402464,0.17008658030214,0.0992909512008853,33.9559725880616,49.1176737975758,31.4290715062023,2.29692785646008,6.46142994238612,6.03319451520489,38.0046838912748,7.30887376303799,4.8780712344167,13.9706748161119,0,15.8481681015439,6.35473563452804,8.31173226792462,5.71674197534634,5.4409111995798,2.3440060335714,2.09409497589519,3.52938892818609,1.36609096991689,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,1.43752564364972,34.395434241836,66.0079549230323,86.0400125804708,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,30.8962868799391,37.1812075725385,15.0729534124872,16.3480536626463,0.679971333707751,0,0,0,0,0.340860645156116,27.2775304833012,50.880898729489,3.38024207464033,24.3820307087204,25.4805239706646,56.8853362522665,19.9171757730317,25.0826266820348,29.8259422558722,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,10.9031763300387,8.39863823390771,7.11593271609162,0,0,0.251308704225729,0.173824320192276,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,4.91549231119264,18.5290493122595,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0.578596234326046,58.8086007363162,44.6002660731342,0,0.551873492609465,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0.238744688006273,0.328281799490123,0,0,0.512612642393558,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0,10.0287273696375,10.0765045673034,10.0885980877229,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0.576060012515731,0,0,0.102710957164827,0.51968329191118,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,86.3525358625112,31.6689913831449,95.8621159438888,0.19318959403219,0,0,0,0,0,0.920650473014354,0,10.6548973053086,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=1.28119077683835,4.53668029931169,6.3699893514535,20.5675663688644,22.5403078475856,6.88305014838748,39.4805362606438,26.0829113351984,63.6365024125534,51.2601312645166,68.6584052584275,36.8547374558454,52.5586240888802,32.607810102286,0,90.9113950580319,83.9474253753776,41.4832747446083,36.198210471915,33.1023928402464,0.17008658030214,0.0992909512008853,33.9559725880616,49.1176737975758,31.4290715062023,2.29692785646008,6.46142994238612,6.03319451520489,38.0046838912748,7.30887376303799,4.8780712344167,13.9706748161119,0,15.8481681015439,6.35473563452804,8.31173226792462,5.71674197534634,5.4409111995798,2.3440060335714,2.09409497589519,3.52938892818609,1.36609096991689,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,1.43752564364972,34.395434241836,66.0079549230323,86.0400125804708,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,30.8962868799391,37.1812075725385,15.0729534124872,16.3480536626463,0.679971333707751,0,0,0,0,0.340860645156116,27.2775304833012,50.880898729489,3.38024207464033,24.3820307087204,25.4805239706646,56.8853362522665,19.9171757730317,25.0826266820348,29.8259422558722,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,10.9031763300387,8.39863823390771,7.11593271609162,0,0,0.251308704225729,0.173824320192276,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,4.91549231119264,18.5290493122595,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0,0,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0.578596234326046,58.8086007363162,44.6002660731342,0,0.551873492609465,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0.238744688006273,0.328281799490123,0,0,0.512612642393558,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0,10.0287273696375,10.0765045673034,10.0885980877229,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0.576060012515731,0,0,0.102710957164827,0.51968329191118,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,86.3525358625112,31.6689913831449,95.8621159438888,0.19318959403219,0,0,0,0,0,0.920650473014354,0,10.6548973053086,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p@chr3:59235156..59235161,+
}}
}}

Latest revision as of 22:05, 3 August 2015

Short description:p@chr3:59235156..59235161, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:59235156..59235161, +
Coexpression cluster:MCL_coexpression_mm9:81
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr3:59235156..59235161+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I839.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E763.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E668.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F136.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E452.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E832.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A390.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A583.95
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.48
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D149.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D231.43
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B938.00
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A186.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D930.90
Mouse Schwann, donor2.CNhs12573.11746-123F937.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I850.88
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.83
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.90
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.53
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A144.60
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.09
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H386.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G595.86
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.73e-2332
hematopoietic oligopotent progenitor cell1.73e-2332
hematopoietic stem cell1.73e-2332
hematopoietic multipotent progenitor cell1.73e-2332
hematopoietic lineage restricted progenitor cell8.14e-2125
connective tissue cell5.44e-2046
mesenchymal cell5.44e-2046
motile cell6.76e-2054
epithelial cell6.05e-1725
endo-epithelial cell1.68e-1615
stem cell4.97e-1597
lymphoid lineage restricted progenitor cell2.07e-1412
mature alpha-beta T cell1.41e-139
alpha-beta T cell1.41e-139
immature T cell1.41e-139
mature T cell1.41e-139
immature alpha-beta T cell1.41e-139
leukocyte2.07e-1317
nongranular leukocyte2.07e-1317
T cell3.50e-1311
pro-T cell3.50e-1311
endodermal cell4.12e-1320
lymphocyte4.72e-1313
common lymphoid progenitor4.72e-1313
CD4-positive, alpha-beta T cell4.27e-128
common myeloid progenitor1.12e-1119
somatic stem cell1.34e-1091
multi fate stem cell1.34e-1091
intestinal epithelial cell1.02e-099
epithelial cell of alimentary canal1.02e-099
thymocyte1.41e-096
double negative thymocyte1.41e-096
naive T cell1.41e-096
double-positive, alpha-beta thymocyte1.41e-096
CD4-positive, alpha-beta thymocyte1.41e-096
naive thymus-derived CD4-positive, alpha-beta T cell1.41e-096
DN4 thymocyte1.41e-096
DN1 thymic pro-T cell1.41e-096
DN2 thymocyte1.41e-096
DN3 thymocyte1.41e-096
immature single positive thymocyte1.41e-096
early T lineage precursor1.41e-096
mature CD4 single-positive thymocyte1.41e-096
resting double-positive thymocyte1.41e-096
double-positive blast1.41e-096
CD69-positive double-positive thymocyte1.41e-096
CD69-positive, CD4-positive single-positive thymocyte1.41e-096
CD4-positive, CD8-intermediate double-positive thymocyte1.41e-096
CD24-positive, CD4 single-positive thymocyte1.41e-096
myeloid cell4.24e-0916
myeloid lineage restricted progenitor cell3.40e-0813
columnar/cuboidal epithelial cell5.77e-087
megakaryocyte-erythroid progenitor cell1.48e-079
brush border epithelial cell2.92e-076
gut absorptive cell2.92e-076
enterocyte2.92e-076
megakaryocyte progenitor cell9.60e-076
megakaryocyte9.60e-076
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