FFCP PHASE1:Mm9::chr2:90213339..90213368,+: Difference between revisions
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|id=chr2:90213339..90213368,+
|short_description=p@chr2:90213339..90213368,+
|description=CAGE_peak_at_chr2:90213339..90213368,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=415 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:90213339..90213368,+ | |||
|description=CAGE_peak_at_chr2:90213339..90213368,+ | |||
|id=chr2:90213339..90213368,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.78e-16!15;CL:0000239!6.45e-16!6;CL:0000677!6.45e-16!6;CL:0000212!6.45e-16!6;CL:0000584!6.45e-16!6;CL:0000063!1.49e-15!66;CL:0000066!2.45e-15!25;CL:0000223!2.65e-14!20;CL:0000075!1.54e-13!7;CL:0000548!1.09e-12!115;CL:0000004!1.09e-12!115;CL:0000255!1.09e-12!115;CL:0002371!3.32e-12!118;CL:0000144!9.54e-12!121;CL:0000012!9.54e-12!121;CL:0002563!2.30e-10!9;CL:0002251!2.30e-10!9;CL:0000624!3.81e-10!8;CL:0000893!1.46e-09!6;CL:0002489!1.46e-09!6;CL:0000898!1.46e-09!6;CL:0000809!1.46e-09!6;CL:0000810!1.46e-09!6;CL:0000895!1.46e-09!6;CL:0000808!1.46e-09!6;CL:0000894!1.46e-09!6;CL:0000806!1.46e-09!6;CL:0000807!1.46e-09!6;CL:0000805!1.46e-09!6;CL:0002425!1.46e-09!6;CL:0002436!1.46e-09!6;CL:0002427!1.46e-09!6;CL:0002428!1.46e-09!6;CL:0002429!1.46e-09!6;CL:0002433!1.46e-09!6;CL:0002431!1.46e-09!6;CL:0002432!1.46e-09!6;CL:0000791!5.96e-09!9;CL:0000789!5.96e-09!9;CL:0002420!5.96e-09!9;CL:0002419!5.96e-09!9;CL:0000790!5.96e-09!9;CL:0000215!1.89e-08!3;CL:0000068!2.00e-08!3;CL:0002202!2.00e-08!3;CL:0000069!2.00e-08!3;CL:0002632!2.00e-08!3;CL:0002368!2.00e-08!3;CL:0000307!2.00e-08!3;CL:0000377!2.00e-08!3;CL:0000349!3.17e-08!3;CL:0000351!3.17e-08!3;CL:0000084!3.25e-07!11;CL:0000827!3.25e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.82e-19,15;CL:0000223,3.13e-18,20;CL:0000239,2.99e-16,6;CL:0000677,2.99e-16,6;CL:0000584,2.99e-16,6;CL:0000066,1.97e-14,25;CL:0000075,5.71e-14,7;CL:0002563,6.42e-11,9;CL:0002251,6.42e-11,9;CL:0000068,1.45e-08,3;CL:0002202,1.45e-08,3;CL:0000069,1.45e-08,3;CL:0002632,1.45e-08,3;CL:0002368,1.45e-08,3;CL:0000307,1.45e-08,3;CL:0000377,1.45e-08,3;CL:0000057,1.59e-07,1;CL:0000632,1.59e-07,1;CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.37e-13!15;UBERON:0003350!2.30e-10!9;UBERON:0004808!2.30e-10!9;UBERON:0001277!2.30e-10!9;UBERON:0001242!2.03e-09!13;UBERON:0000060!2.03e-09!13;UBERON:0001262!2.03e-09!13;UBERON:0004786!2.03e-09!13;UBERON:0003126!2.00e-08!3;UBERON:0001005!2.00e-08!3;UBERON:0007196!2.00e-08!3;UBERON:0001558!2.00e-08!3;UBERON:0000485!2.42e-08!11;UBERON:0000358!3.17e-08!3;UBERON:0000307!3.17e-08!3;UBERON:0004923!1.09e-07!24;UBERON:0003929!2.50e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.41e-19,15;UBERON:0001962,8.36e-13,2;UBERON:0001961,8.36e-13,2;UBERON:0001744,8.36e-13,2;UBERON:0004923,1.29e-11,24;UBERON:0001242,1.77e-11,13;UBERON:0001262,1.77e-11,13;UBERON:0004786,1.77e-11,13;UBERON:0003350,6.42e-11,9;UBERON:0004808,6.42e-11,9;UBERON:0001277,6.42e-11,9;UBERON:0000485,5.70e-09,11;UBERON:0002465,7.76e-09,3;UBERON:0003126,1.45e-08,3;UBERON:0001005,1.45e-08,3;UBERON:0007196,1.45e-08,3;UBERON:0001558,1.45e-08,3;UBERON:0003199,2.43e-07,1;UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,13.9133537201142,8.5152274090879,0.671517087647559,3.03696432774183,0,0.281577444303333,0.468129052643987,0.34243593645101,0,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,2.23989391910769,3.89995777814189,0,0.86152399231815,0.215471232685889,3.42042155021473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.755715601067855,2.31891590961342,11.185510400758,0,0,0,0,0,0,0,0.35333957451034,0,0,0,14.2213340630666,0.432982082022428,1.26679932737549,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.807424709485281,1.00730769818447,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,13.9133537201142,8.5152274090879,0.671517087647559,3.03696432774183,0,0.281577444303333,0.468129052643987,0.34243593645101,0,0.513602189793617,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,2.23989391910769,3.89995777814189,0,0.86152399231815,0.215471232685889,3.42042155021473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,0.755715601067855,2.31891590961342,11.185510400758,0,0,0,0,0,0,0,0.35333957451034,0,0,0,14.2213340630666,0.432982082022428,1.26679932737549,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.807424709485281,1.00730769818447,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr2:90213339..90213368,+ | |||
}} | }} |
Latest revision as of 14:38, 5 August 2015
Short description: | p@chr2:90213339..90213368, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:90213339..90213368, + |
Coexpression cluster: | MCL_coexpression_mm9:415 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.82e-19 | 15 |
endodermal cell | 3.13e-18 | 20 |
brush border epithelial cell | 2.99e-16 | 6 |
gut absorptive cell | 2.99e-16 | 6 |
enterocyte | 2.99e-16 | 6 |
epithelial cell | 1.97e-14 | 25 |
columnar/cuboidal epithelial cell | 5.71e-14 | 7 |
intestinal epithelial cell | 6.42e-11 | 9 |
epithelial cell of alimentary canal | 6.42e-11 | 9 |
duct epithelial cell | 1.45e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.45e-08 | 3 |
branched duct epithelial cell | 1.45e-08 | 3 |
epithelial cell of lower respiratory tract | 1.45e-08 | 3 |
respiratory epithelial cell | 1.45e-08 | 3 |
tracheal epithelial cell | 1.45e-08 | 3 |
tracheoblast | 1.45e-08 | 3 |
fibroblast | 1.59e-07 | 1 |
hepatic stellate cell | 1.59e-07 | 1 |
lining cell | 3.67e-07 | 1 |
meso-epithelial cell | 3.67e-07 | 1 |
endothelial cell | 3.67e-07 | 1 |
endothelial cell of sinusoid | 3.67e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.41e-19 | 15 |
gut-associated lymphoid tissue | 8.36e-13 | 2 |
mucosa-associated lymphoid tissue | 8.36e-13 | 2 |
lymphoid tissue | 8.36e-13 | 2 |
organ component layer | 1.29e-11 | 24 |
intestinal mucosa | 1.77e-11 | 13 |
wall of intestine | 1.77e-11 | 13 |
gastrointestinal system mucosa | 1.77e-11 | 13 |
epithelium of mucosa | 6.42e-11 | 9 |
gastrointestinal system epithelium | 6.42e-11 | 9 |
intestinal epithelium | 6.42e-11 | 9 |
simple columnar epithelium | 5.70e-09 | 11 |
lymphoid system | 7.76e-09 | 3 |
trachea | 1.45e-08 | 3 |
respiratory airway | 1.45e-08 | 3 |
tracheobronchial tree | 1.45e-08 | 3 |
lower respiratory tract | 1.45e-08 | 3 |
egg chamber | 2.43e-07 | 1 |
bile duct | 3.67e-07 | 1 |
hepatic sinusoid | 3.67e-07 | 1 |
parenchyma | 3.67e-07 | 1 |
abdomen blood vessel | 3.67e-07 | 1 |
sinusoid | 3.67e-07 | 1 |
digestive system duct | 3.67e-07 | 1 |
abdominal segment blood vessel | 3.67e-07 | 1 |
trunk blood vessel | 3.67e-07 | 1 |
liver parenchyma | 3.67e-07 | 1 |
liver lobule | 3.67e-07 | 1 |
biliary system | 3.67e-07 | 1 |
biliary tree | 3.67e-07 | 1 |
biliary bud | 3.67e-07 | 1 |
hepatic duct | 3.67e-07 | 1 |