FFCP PHASE1:Mm9::chr2:174585867..174585880,+: Difference between revisions
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|id=chr2:174585867..174585880,+
|short_description=p5@Edn3
|description=CAGE_peak_5_at_Edn3_5end
|association_with_transcript=-239bp_to_ENSMUST00000029030_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13616 | |EntrezGene=13616 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P48299 | |UniProt=P48299 | ||
|association_with_transcript=-239bp_to_ENSMUST00000029030_5end | |||
|cluster_id=chr2:174585867..174585880,+ | |||
|description=CAGE_peak_5_at_Edn3_5end | |||
|id=chr2:174585867..174585880,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.29e-11!6;CL:0000677!1.29e-11!6;CL:0000212!1.29e-11!6;CL:0000584!1.29e-11!6;CL:0000075!8.21e-10!7;CL:0002563!2.07e-07!9;CL:0002251!2.07e-07!9;CL:0000473!8.73e-07!3;CL:0000627!8.73e-07!3;CL:0000682!8.73e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.84e-25,6;CL:0000677,6.84e-25,6;CL:0000584,6.84e-25,6;CL:0000075,2.78e-21,7;CL:0002563,1.83e-16,9;CL:0002251,1.83e-16,9;CL:0000682,1.08e-13,3;CL:0000066,1.53e-12,25;CL:0002076,1.07e-09,15;CL:0000223,3.80e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.96e-17!15;UBERON:0001242!7.82e-14!13;UBERON:0000060!7.82e-14!13;UBERON:0001262!7.82e-14!13;UBERON:0004786!7.82e-14!13;UBERON:0000160!3.08e-11!43;UBERON:0002048!6.83e-10!14;UBERON:0000117!6.83e-10!14;UBERON:0000171!6.83e-10!14;UBERON:0000170!6.83e-10!14;UBERON:0005597!6.83e-10!14;UBERON:0000118!6.83e-10!14;UBERON:0004923!1.44e-09!24;UBERON:0005409!1.04e-08!59;UBERON:0001007!5.26e-08!128;UBERON:0001555!5.26e-08!128;UBERON:0007026!5.26e-08!128;UBERON:0005153!8.77e-08!17;UBERON:0005178!8.77e-08!17;UBERON:0005181!8.77e-08!17;UBERON:0002224!8.77e-08!17;UBERON:0000915!8.77e-08!17;UBERON:0008947!8.77e-08!17;UBERON:0003258!8.77e-08!17;UBERON:0004119!9.40e-08!130;UBERON:0000925!9.40e-08!130;UBERON:0006595!9.40e-08!130;UBERON:0003350!2.07e-07!9;UBERON:0004808!2.07e-07!9;UBERON:0001277!2.07e-07!9;UBERON:0000331!6.75e-07!3;UBERON:0002116!6.75e-07!3;UBERON:0001204!6.75e-07!3;UBERON:0001168!6.75e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.93e-40,15;UBERON:0001242,1.19e-31,13;UBERON:0001262,1.19e-31,13;UBERON:0004786,1.19e-31,13;UBERON:0000160,1.47e-24,31;UBERON:0004923,4.08e-24,24;UBERON:0003350,1.83e-16,9;UBERON:0004808,1.83e-16,9;UBERON:0001277,1.83e-16,9;UBERON:0005409,2.08e-15,47;UBERON:0000331,5.99e-14,3;UBERON:0002116,5.99e-14,3;UBERON:0001204,5.99e-14,3;UBERON:0001168,5.99e-14,3;UBERON:0000485,2.16e-13,11;UBERON:0002108,1.38e-10,4;UBERON:0001962,5.51e-10,2;UBERON:0001961,5.51e-10,2;UBERON:0001744,5.51e-10,2;UBERON:0001007,5.02e-09,116;UBERON:0001555,5.02e-09,116;UBERON:0007026,5.02e-09,116;UBERON:0004119,8.05e-09,118;UBERON:0000925,8.05e-09,118;UBERON:0006595,8.05e-09,118;UBERON:0002465,6.37e-07,3;UBERON:0004921,7.93e-07,114 | |||
|phase1_expression=0,12.2141392673776,18.1999695755814,2.11724947914781,4.00716583957078,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15961356246374,15.3704218315004,9.18771142584032,8.18447792702242,4.74036711908956,6.08074942260396,9.57714493087737,11.7517170647311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,0,3.59527763461689,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.938760993154008,2.1775813467436,1.90434912708811,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.436039249896986,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,12.2141392673776,18.1999695755814,2.11724947914781,4.00716583957078,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15961356246374,15.3704218315004,9.18771142584032,8.18447792702242,4.74036711908956,6.08074942260396,9.57714493087737,11.7517170647311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,1.58670339998127,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,0,3.59527763461689,0.864552199498777,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.938760993154008,2.1775813467436,1.90434912708811,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.436039249896986,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p5@Edn3 | |||
}} | }} |
Latest revision as of 06:55, 26 September 2015
Short description: | p5@Edn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Edn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -239bp_to_ENSMUST00000029030_5end |
EntrezGene: | Edn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.84e-25 | 6 |
gut absorptive cell | 6.84e-25 | 6 |
enterocyte | 6.84e-25 | 6 |
columnar/cuboidal epithelial cell | 2.78e-21 | 7 |
intestinal epithelial cell | 1.83e-16 | 9 |
epithelial cell of alimentary canal | 1.83e-16 | 9 |
M cell of gut | 1.08e-13 | 3 |
epithelial cell | 1.53e-12 | 25 |
endo-epithelial cell | 1.07e-09 | 15 |
endodermal cell | 3.80e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.93e-40 | 15 |
intestinal mucosa | 1.19e-31 | 13 |
wall of intestine | 1.19e-31 | 13 |
gastrointestinal system mucosa | 1.19e-31 | 13 |
intestine | 1.47e-24 | 31 |
organ component layer | 4.08e-24 | 24 |
epithelium of mucosa | 1.83e-16 | 9 |
gastrointestinal system epithelium | 1.83e-16 | 9 |
intestinal epithelium | 1.83e-16 | 9 |
gastrointestinal system | 2.08e-15 | 47 |
ileal mucosa | 5.99e-14 | 3 |
ileum | 5.99e-14 | 3 |
mucosa of small intestine | 5.99e-14 | 3 |
wall of small intestine | 5.99e-14 | 3 |
simple columnar epithelium | 2.16e-13 | 11 |
small intestine | 1.38e-10 | 4 |
gut-associated lymphoid tissue | 5.51e-10 | 2 |
mucosa-associated lymphoid tissue | 5.51e-10 | 2 |
lymphoid tissue | 5.51e-10 | 2 |
digestive system | 5.02e-09 | 116 |
digestive tract | 5.02e-09 | 116 |
primitive gut | 5.02e-09 | 116 |
endoderm-derived structure | 8.05e-09 | 118 |
endoderm | 8.05e-09 | 118 |
presumptive endoderm | 8.05e-09 | 118 |
lymphoid system | 6.37e-07 | 3 |
subdivision of digestive tract | 7.93e-07 | 114 |