FFCP PHASE1:Mm9::chr2:155651874..155651887,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:155651874..155651887,+
|short_description=p@chr2:155651874..155651887,+
|description=CAGE_peak_at_chr2:155651874..155651887,+
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=210 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:155651874..155651887,+ | |||
|description=CAGE_peak_at_chr2:155651874..155651887,+ | |||
|id=chr2:155651874..155651887,+ | |||
|ontology_enrichment_celltype=CL:0000075!8.80e-10!7;CL:0000063!1.02e-09!66;CL:0000239!3.78e-09!6;CL:0000677!3.78e-09!6;CL:0000212!3.78e-09!6;CL:0000584!3.78e-09!6;CL:0000066!1.11e-08!25;CL:0000144!8.16e-08!121;CL:0000012!8.16e-08!121;CL:0002563!1.57e-07!9;CL:0002251!1.57e-07!9;CL:0000624!2.08e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.64e-15,25;CL:0000239,2.00e-14,6;CL:0000677,2.00e-14,6;CL:0000584,2.00e-14,6;CL:0000075,2.47e-12,7;CL:0000682,2.37e-11,3;CL:0000223,3.81e-10,20;CL:0002563,1.54e-09,9;CL:0002251,1.54e-09,9;CL:0002076,1.05e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.65e-12!15;UBERON:0001242!9.40e-10!13;UBERON:0000060!9.40e-10!13;UBERON:0001262!9.40e-10!13;UBERON:0004786!9.40e-10!13;UBERON:0004923!6.82e-09!24;UBERON:0003350!1.57e-07!9;UBERON:0004808!1.57e-07!9;UBERON:0001277!1.57e-07!9;UBERON:0000485!2.53e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.92e-14,15;UBERON:0003350,1.54e-09,9;UBERON:0004808,1.54e-09,9;UBERON:0001277,1.54e-09,9;UBERON:0001242,4.41e-09,13;UBERON:0001262,4.41e-09,13;UBERON:0004786,4.41e-09,13;UBERON:0001962,2.46e-08,2;UBERON:0001961,2.46e-08,2;UBERON:0001744,2.46e-08,2;UBERON:0004923,3.09e-08,24;UBERON:0000485,9.32e-08,11 | |||
|phase1_expression=0,3.14077866875425,3.63999391511629,0.90739263392049,1.50268718983904,1.34303417529512,1.16806320297763,0.258246646883153,1.267098499365,2.80877431586392,1.19852577757853,0.0797721589953364,0,0.262261207256992,0,0,0,0,0,0,0,0,0,2.23989391910769,3.67054849707472,2.8711598205751,3.01533397311352,2.15471232685889,0.570070258369122,0,0.886922042621219,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0.550640256485045,0,0,0,0,0,0,0,0.725362142011344,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,5.79728977403356,0.860423876981386,3.39985666853875,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,1.01343946190039,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,2.27648736561249,2.99951365496704,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,3.56954702987096,3.07893195112048,1.52019971184866,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.14077866875425,3.63999391511629,0.90739263392049,1.50268718983904,1.34303417529512,1.16806320297763,0.258246646883153,1.267098499365,2.80877431586392,1.19852577757853,0.0797721589953364,0,0.262261207256992,0,0,0,0,0,0,0,0,0,2.23989391910769,3.67054849707472,2.8711598205751,3.01533397311352,2.15471232685889,0.570070258369122,0,0.886922042621219,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0.550640256485045,0,0,0,0,0,0,0,0.725362142011344,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,5.79728977403356,0.860423876981386,3.39985666853875,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,1.01343946190039,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,2.27648736561249,2.99951365496704,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,3.56954702987096,3.07893195112048,1.52019971184866,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:155651874..155651887,+ | |||
}} | }} |
Latest revision as of 08:39, 4 August 2015
Short description: | p@chr2:155651874..155651887, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:155651874..155651887, + |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.64e-15 | 25 |
brush border epithelial cell | 2.00e-14 | 6 |
gut absorptive cell | 2.00e-14 | 6 |
enterocyte | 2.00e-14 | 6 |
columnar/cuboidal epithelial cell | 2.47e-12 | 7 |
M cell of gut | 2.37e-11 | 3 |
endodermal cell | 3.81e-10 | 20 |
intestinal epithelial cell | 1.54e-09 | 9 |
epithelial cell of alimentary canal | 1.54e-09 | 9 |
endo-epithelial cell | 1.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.92e-14 | 15 |
epithelium of mucosa | 1.54e-09 | 9 |
gastrointestinal system epithelium | 1.54e-09 | 9 |
intestinal epithelium | 1.54e-09 | 9 |
intestinal mucosa | 4.41e-09 | 13 |
wall of intestine | 4.41e-09 | 13 |
gastrointestinal system mucosa | 4.41e-09 | 13 |
gut-associated lymphoid tissue | 2.46e-08 | 2 |
mucosa-associated lymphoid tissue | 2.46e-08 | 2 |
lymphoid tissue | 2.46e-08 | 2 |
organ component layer | 3.09e-08 | 24 |
simple columnar epithelium | 9.32e-08 | 11 |