FFCP PHASE1:Mm9::chr2:14096119..14096136,+: Difference between revisions
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|id=chr2:14096119..14096136,+
|short_description=p3@Fam23a
|description=CAGE_peak_3_at_Fam23a_5end
|association_with_transcript=-14bp_to_ENSMUST00000077517,NM_00108...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=625286 | |EntrezGene=625286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=A2ARJ3 | |UniProt=A2ARJ3 | ||
|association_with_transcript=-14bp_to_ENSMUST00000077517,NM_001081310,uc008ikj.1_5end | |||
|cluster_id=chr2:14096119..14096136,+ | |||
|description=CAGE_peak_3_at_Fam23a_5end | |||
|id=chr2:14096119..14096136,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.42e-12!9;CL:0002251!3.42e-12!9;CL:0000239!4.70e-09!6;CL:0000677!4.70e-09!6;CL:0000212!4.70e-09!6;CL:0000584!4.70e-09!6;CL:0000075!1.38e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.34e-20,9;CL:0002251,1.34e-20,9;CL:0000239,5.60e-15,6;CL:0000677,5.60e-15,6;CL:0000584,5.60e-15,6;CL:0000075,9.77e-13,7;CL:0000066,9.11e-12,25;CL:0002076,1.06e-11,15;CL:0000223,2.28e-08,20;CL:0000682,3.28e-08,3;CL:0002250,3.22e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.28e-24!43;UBERON:0005409!4.17e-21!59;UBERON:0000344!1.18e-20!15;UBERON:0001242!9.38e-18!13;UBERON:0000060!9.38e-18!13;UBERON:0001262!9.38e-18!13;UBERON:0004786!9.38e-18!13;UBERON:0003350!3.42e-12!9;UBERON:0004808!3.42e-12!9;UBERON:0001277!3.42e-12!9;UBERON:0004923!4.37e-11!24;UBERON:0000485!1.53e-09!11;UBERON:0001007!4.16e-07!128;UBERON:0001555!4.16e-07!128;UBERON:0007026!4.16e-07!128;UBERON:0004119!7.73e-07!130;UBERON:0000925!7.73e-07!130;UBERON:0006595!7.73e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.34e-62,31;UBERON:0005409,1.49e-41,47;UBERON:0000344,7.99e-36,15;UBERON:0001242,1.34e-30,13;UBERON:0001262,1.34e-30,13;UBERON:0004786,1.34e-30,13;UBERON:0004923,4.75e-21,24;UBERON:0003350,1.34e-20,9;UBERON:0004808,1.34e-20,9;UBERON:0001277,1.34e-20,9;UBERON:0000485,1.49e-16,11;UBERON:0001007,1.14e-15,116;UBERON:0001555,1.14e-15,116;UBERON:0007026,1.14e-15,116;UBERON:0004119,2.73e-15,118;UBERON:0000925,2.73e-15,118;UBERON:0006595,2.73e-15,118;UBERON:0004921,2.60e-13,114;UBERON:0002108,5.58e-11,4;UBERON:0000331,7.30e-09,3;UBERON:0002116,7.30e-09,3;UBERON:0001204,7.30e-09,3;UBERON:0001168,7.30e-09,3 | |||
|phase1_expression=0,21.9854506812797,19.1099680543605,32.061206398524,23.5420993074783,8.2260843236826,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.1182420880703,36.2466664086129,19.5238867799107,18.9535278309993,14.0056301245828,39.9049180858385,33.2679771283109,14.6342137032501,0,0,0,3.75507105676657,4.3221007793208,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,32.1875889562825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.6659013032897,26.709507233018,0,0,1.80414445850931,4.84040459096022,5.11469500843202,5.1360919050391,23.7264530772256,3.78807595865225,3.51869292320377,4.17808591286417,3.70431765526328,24.268124033664,22.9106332867176,28.2780608021201,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7847909553045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.640251524048693,0.402048282689293,0,0.231768651889711,0,0,0,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,21.9854506812797,19.1099680543605,32.061206398524,23.5420993074783,8.2260843236826,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.1182420880703,36.2466664086129,19.5238867799107,18.9535278309993,14.0056301245828,39.9049180858385,33.2679771283109,14.6342137032501,0,0,0,3.75507105676657,4.3221007793208,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,32.1875889562825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.6659013032897,26.709507233018,0,0,1.80414445850931,4.84040459096022,5.11469500843202,5.1360919050391,23.7264530772256,3.78807595865225,3.51869292320377,4.17808591286417,3.70431765526328,24.268124033664,22.9106332867176,28.2780608021201,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7847909553045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0,0,2.59229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.640251524048693,0.402048282689293,0,0.231768651889711,0,0,0,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p3@Fam23a | |||
}} | }} |
Latest revision as of 19:59, 25 September 2015
Short description: | p3@Fam23a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam23a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -14bp_to_ENSMUST00000077517, NM_001081310, uc008ikj.1_5end |
EntrezGene: | Fam23a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.34e-20 | 9 |
epithelial cell of alimentary canal | 1.34e-20 | 9 |
brush border epithelial cell | 5.60e-15 | 6 |
gut absorptive cell | 5.60e-15 | 6 |
enterocyte | 5.60e-15 | 6 |
columnar/cuboidal epithelial cell | 9.77e-13 | 7 |
epithelial cell | 9.11e-12 | 25 |
endo-epithelial cell | 1.06e-11 | 15 |
endodermal cell | 2.28e-08 | 20 |
M cell of gut | 3.28e-08 | 3 |
intestinal crypt stem cell | 3.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.34e-62 | 31 |
gastrointestinal system | 1.49e-41 | 47 |
mucosa | 7.99e-36 | 15 |
intestinal mucosa | 1.34e-30 | 13 |
wall of intestine | 1.34e-30 | 13 |
gastrointestinal system mucosa | 1.34e-30 | 13 |
organ component layer | 4.75e-21 | 24 |
epithelium of mucosa | 1.34e-20 | 9 |
gastrointestinal system epithelium | 1.34e-20 | 9 |
intestinal epithelium | 1.34e-20 | 9 |
simple columnar epithelium | 1.49e-16 | 11 |
digestive system | 1.14e-15 | 116 |
digestive tract | 1.14e-15 | 116 |
primitive gut | 1.14e-15 | 116 |
endoderm-derived structure | 2.73e-15 | 118 |
endoderm | 2.73e-15 | 118 |
presumptive endoderm | 2.73e-15 | 118 |
subdivision of digestive tract | 2.60e-13 | 114 |
small intestine | 5.58e-11 | 4 |
ileal mucosa | 7.30e-09 | 3 |
ileum | 7.30e-09 | 3 |
mucosa of small intestine | 7.30e-09 | 3 |
wall of small intestine | 7.30e-09 | 3 |