FFCP PHASE2:Hg19::chr2:220492674..220492712,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6508 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:11029 |TSSclassifier=strong...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=11029 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DR53,P48751 | ||
|association_with_transcript=0bp_to_AB384869,AK299109,BC136384,BC171760,U05596_5end | |association_with_transcript=0bp_to_AB384869,AK299109,BC136384,BC171760,U05596_5end | ||
|cluster_id=chr2:220492674..220492712,+ | |cluster_id=chr2:220492674..220492712,+ | ||
Latest revision as of 22:27, 24 September 2015
| Short description: | p6@SLC4A3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_SLC4A3_5end |
| Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
| Association with transcript: | 0bp_to_AB384869, AK299109, BC136384, BC171760, U05596_5end |
| EntrezGene: | SLC4A3 |
| HGNC: | 11029 |
| UniProt: | B4DR53P48751 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@SLC4A3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 3.57e-21 | 27 |
| gland of diencephalon | 1.05e-20 | 4 |
| neuroendocrine gland | 1.05e-20 | 4 |
| pituitary gland | 4.96e-19 | 2 |
| adult organism | 1.77e-15 | 114 |
| brainstem | 4.31e-14 | 6 |
| valve | 1.93e-13 | 3 |
| cardiac mesenchyme | 1.93e-13 | 3 |
| cardiac chamber | 1.93e-13 | 3 |
| cardial valve | 1.93e-13 | 3 |
Showing 1 to 10 of 58 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 1.13e-19 | 2 |
| vascular disease | 1.19e-10 | 1 |
| ischemia | 1.19e-10 | 1 |
| extrinsic cardiomyopathy | 1.19e-10 | 1 |
| myocardial ischemia | 1.19e-10 | 1 |
| myocardial infarction | 1.19e-10 | 1 |
| cardiovascular system disease | 2.62e-10 | 4 |
Showing 1 to 7 of 7 entries
