FFCP PHASE1:Mm9::chr1:37598054..37598057,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:37598054..37598057,+
|short_description=p@chr1:37598054..37598057,+
|description=CAGE_peak_at_chr1:37598054..37598057,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:37598054..37598057,+ | |||
|description=CAGE_peak_at_chr1:37598054..37598057,+ | |||
|id=chr1:37598054..37598057,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.78e-10!9;CL:0002251!5.78e-10!9;CL:0002076!6.49e-09!15;CL:0000066!1.08e-07!25;CL:0000838!3.83e-07!12;CL:0000239!4.56e-07!6;CL:0000677!4.56e-07!6;CL:0000212!4.56e-07!6;CL:0000584!4.56e-07!6;CL:0000223!9.64e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.69e-38,25;CL:0002076,1.08e-36,15;CL:0002563,3.74e-36,9;CL:0002251,3.74e-36,9;CL:0000223,1.17e-31,20;CL:0000239,3.25e-24,6;CL:0000677,3.25e-24,6;CL:0000584,3.25e-24,6;CL:0000075,1.09e-20,7;CL:0002250,1.80e-13,3;CL:0000682,5.12e-12,3;CL:0000068,1.22e-11,3;CL:0002202,1.22e-11,3;CL:0000069,1.22e-11,3;CL:0002632,1.22e-11,3;CL:0002368,1.22e-11,3;CL:0000307,1.22e-11,3;CL:0000377,1.22e-11,3;CL:0002321,1.18e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!4.21e-10!13;UBERON:0000060!4.21e-10!13;UBERON:0001262!4.21e-10!13;UBERON:0004786!4.21e-10!13;UBERON:0003350!5.78e-10!9;UBERON:0004808!5.78e-10!9;UBERON:0001277!5.78e-10!9;UBERON:0000344!1.35e-09!15;UBERON:0000064!1.83e-08!99;UBERON:0000485!1.71e-07!11;UBERON:0000072!4.95e-07!27;UBERON:0000160!6.84e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.74e-36,9;UBERON:0004808,3.74e-36,9;UBERON:0001277,3.74e-36,9;UBERON:0000485,2.46e-29,11;UBERON:0001242,1.30e-24,13;UBERON:0001262,1.30e-24,13;UBERON:0004786,1.30e-24,13;UBERON:0000344,3.83e-21,15;UBERON:0004923,1.14e-15,24;UBERON:0003126,1.22e-11,3;UBERON:0001005,1.22e-11,3;UBERON:0007196,1.22e-11,3;UBERON:0001558,1.22e-11,3;UBERON:0000160,1.30e-11,31;UBERON:0005409,4.37e-07,47 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,5.74682001482977,5.50985302940982,2.51818907867835,2.10251376535973,0.774739940649458,0.703943610758334,0.70219357896598,0.171217968225505,0,0.856003649656029,0.786783621770977,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.397163804803541,0.522399578277871,0,0.45881856213434,1.72269589234506,1.29228598847722,1.50829862880122,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,8.37669697278696,2.65975432573588,9.18762103180661,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.244981598429908,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.372798891650601,0.075726193333184,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,1.01104889002957,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,1.05780226665418,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,2.54473610634254,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,1.90648863777438,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.979660166265606,0.276399947608848,0,0,0.203319467126849,0,0,0.655087691238533,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0.600977247599844,0.295379054349154,0.504832249740738,0.533447646584999,0,0.194915761479505,0.481059208201647,0.818138315270983,0,0.221985953374065,0,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,5.74682001482977,5.50985302940982,2.51818907867835,2.10251376535973,0.774739940649458,0.703943610758334,0.70219357896598,0.171217968225505,0,0.856003649656029,0.786783621770977,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.397163804803541,0.522399578277871,0,0.45881856213434,1.72269589234506,1.29228598847722,1.50829862880122,0.190023419456374,0.756090389279792,0.665191531965914,0,0,0,8.37669697278696,2.65975432573588,9.18762103180661,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.244981598429908,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.372798891650601,0.075726193333184,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,1.01104889002957,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,1.05780226665418,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,2.54473610634254,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,1.90648863777438,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.979660166265606,0.276399947608848,0,0,0.203319467126849,0,0,0.655087691238533,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0,0.600977247599844,0.295379054349154,0.504832249740738,0.533447646584999,0,0.194915761479505,0.481059208201647,0.818138315270983,0,0.221985953374065,0,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:37598054..37598057,+ | |||
}} | }} |
Latest revision as of 15:07, 5 August 2015
Short description: | p@chr1:37598054..37598057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:37598054..37598057, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.69e-38 | 25 |
endo-epithelial cell | 1.08e-36 | 15 |
intestinal epithelial cell | 3.74e-36 | 9 |
epithelial cell of alimentary canal | 3.74e-36 | 9 |
endodermal cell | 1.17e-31 | 20 |
brush border epithelial cell | 3.25e-24 | 6 |
gut absorptive cell | 3.25e-24 | 6 |
enterocyte | 3.25e-24 | 6 |
columnar/cuboidal epithelial cell | 1.09e-20 | 7 |
intestinal crypt stem cell | 1.80e-13 | 3 |
M cell of gut | 5.12e-12 | 3 |
duct epithelial cell | 1.22e-11 | 3 |
epithelial cell of tracheobronchial tree | 1.22e-11 | 3 |
branched duct epithelial cell | 1.22e-11 | 3 |
epithelial cell of lower respiratory tract | 1.22e-11 | 3 |
respiratory epithelial cell | 1.22e-11 | 3 |
tracheal epithelial cell | 1.22e-11 | 3 |
tracheoblast | 1.22e-11 | 3 |
embryonic cell | 1.18e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.74e-36 | 9 |
gastrointestinal system epithelium | 3.74e-36 | 9 |
intestinal epithelium | 3.74e-36 | 9 |
simple columnar epithelium | 2.46e-29 | 11 |
intestinal mucosa | 1.30e-24 | 13 |
wall of intestine | 1.30e-24 | 13 |
gastrointestinal system mucosa | 1.30e-24 | 13 |
mucosa | 3.83e-21 | 15 |
organ component layer | 1.14e-15 | 24 |
trachea | 1.22e-11 | 3 |
respiratory airway | 1.22e-11 | 3 |
tracheobronchial tree | 1.22e-11 | 3 |
lower respiratory tract | 1.22e-11 | 3 |
intestine | 1.30e-11 | 31 |
gastrointestinal system | 4.37e-07 | 47 |