FFCP PHASE1:Mm9::chr1:193007123..193007139,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:193007123..193007139,-
|short_description=p1@Atf3
|description=CAGE_peak_1_at_Atf3_5end
|association_with_transcript=72bp_to_NM_007498,uc007ece.1,uc011wys....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11910 | |EntrezGene=11910 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=210 | |||
|TSSclassifier=NA | |||
|UniProt=Q4FJW1,Q60765,Q7TPG4 | |UniProt=Q4FJW1,Q60765,Q7TPG4 | ||
|association_with_transcript=72bp_to_NM_007498,uc007ece.1,uc011wys.1_5end | |||
|cluster_id=chr1:193007123..193007139,- | |||
|description=CAGE_peak_1_at_Atf3_5end | |||
|id=chr1:193007123..193007139,- | |||
|ontology_enrichment_celltype=CL:0000066!1.77e-08!25;CL:0000063!1.05e-07!66;CL:0002563!9.89e-07!9;CL:0002251!9.89e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.08e-08,25;CL:0002563,9.58e-07,9;CL:0002251,9.58e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.19e-07!11;UBERON:0001242!2.56e-07!13;UBERON:0000060!2.56e-07!13;UBERON:0001262!2.56e-07!13;UBERON:0004786!2.56e-07!13;UBERON:0000344!4.24e-07!15;UBERON:0003350!9.89e-07!9;UBERON:0004808!9.89e-07!9;UBERON:0001277!9.89e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.14e-07,11;UBERON:0000160,1.91e-07,31;UBERON:0001242,2.47e-07,13;UBERON:0001262,2.47e-07,13;UBERON:0004786,2.47e-07,13;UBERON:0000344,4.10e-07,15;UBERON:0003350,9.58e-07,9;UBERON:0004808,9.58e-07,9;UBERON:0001277,9.58e-07,9 | |||
|phase1_expression=86.6405262836935,445.641595555464,503.229158764827,525.682799251271,614.098164914222,322.999719158476,234.547091157908,2.7115897922731,468.82644476505,373.33291948358,42.2908381516997,23.4530147446289,0.684802919724823,0.699363219351979,0.333109761815663,1.82227740650843,2.79824751251259,3.94327706697797,1.7824876368746,2.54633791078818,7.90902598404949,0.496454756004426,0.522399578277871,7.35965144849671,5.50582274561208,346.261874361357,235.196049902855,193.277695719242,11.5914285868388,9.8291750606373,11.3082560434205,26.0362576118449,14.1464901144451,0,87.2331891648849,50.0366282529062,159.252097884648,6.27797446105362,14.8453715459522,4.18818995179039,88.2347232046521,21.1744100337118,7.2826552954673,17.877348152532,18.7547322756102,5.50640256485045,1.56478268869608,1.96222640742402,8.78744730937887,14.387812531497,2.93971485413261,5.75010257459886,25.1673909086605,2.90144856804538,4.03312558970957,9.00408026125814,17.1920063963254,34.0343580903112,0.404632921719196,1.5869729378161,1.26766280701236,1.69422266034566,6.22506357277798,182.229692749483,198.762138875962,206.039233334369,91.6776338186318,45.3377600279434,0.933206510776299,0.540023753326763,0.630974884054146,1.14260393761521,2.20868540951614,0.734944795289724,0.958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,0.659431438650969,1.00636407962651,0.52091337055676,1.11673199600552,1.12552522006336,1.68078072554491,2.35702868378934,1.56608848879013,1.3047961207771,119.268754499765,295.484800017531,2044.99396779034,147.992906840798,666.371907033596,75.0187436376566,5.19821133958135,3.58421509677868,4.49422144421606,0.681721290312231,0.259786004602869,1.06001872353102,59.9992968248659,0,2.54805239706646,0,54.555742334826,53.2055717497707,48.0248222764044,15.0722721229159,6.47344709117929,10.3909497345377,2.94925055502431,3.04465478312141,2.7673859670727,2.56228488939458,6.23220147819235,2.01066546127481,48.4502136759373,13.5923395504717,4.42305275974937,9.22071044700232,3.3126227769059,3.39412677194655,29.8226817948995,1.46390398505774,0,34.4867024531598,357.288701276654,439.728701818168,254.267524373202,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.24672826735736,0.973447578406546,12.5262417535889,3.23458123586242,4.54900965180614,4.20883711772948,1.17108398666433,1.37941262660084,1.26043490863744,2.10986744970001,2.9255694635071,1.5373646434182,2.71735001223214,2.84573707812917,1.5089759505299,0.945530400839096,1.75951124163949,3.28793598641362,7.78532297831674,6.61679116392116,8.84863186554157,1.19420560091096,237.348057311873,208.451804762919,186.127092104113,22.3695834338342,21.3418714582798,17.2859579002574,20.8335367314985,15.5443743080449,12.9584374825398,16.2773761325285,18.2425912951741,21.368057653192,5.43047504714485,11.3275550214576,5.75588547775576,19.5907983149945,6.36695334344047,3.89198614405078,0.841159794256509,0.514523061896422,34.363553430315,13.7514294665043,1.06644125267617,3.0190767341857,4.12375876230699,5.24377164020691,3.33567065767305,3.04361001780095,23.7264530772256,7.41145296258049,7.28872105520782,8.55512829776949,6.82374304916921,10.7858329038507,26.5849801345874,17.5244320463843,7.39704813717019,2.28497025219458,2.25415471346161,3.05476991767971,1.74557238450863,2.31448205638051,1.83385957660346,1.62371162777562,0.784993639206874,1.48076596706161,6.22550516883013,2.00214126859313,1.37591296579242,1.79889689907883,2.63718157805054,1.20588579876208,3.56476192493988,4.60313819921297,3.08056930872567,6.31491250332587,4.31304619582064,4.09355042435354,1.5601883655728,2.27320990152401,5.20252499213545,1.92977408545347,9.60716588866344,3.41084541186873,14.1779529504563,2.20668611507745,1.40814148973101,2.01007508930179,3.80869825417622,15.6106918286239,2.83743259391144,4.65075848262427,2.87018583583477,8.02930242107116,4.31712454664739,3.47157740595628,173.409976530163,150.117968733964,3.93411418415229,3.86311444826625,0.963303539926752,1.17211686592203,0.819674726883377,7.32165688892682,6.94118082715765,8.19921363022941,4.73931475012158,52.5731355495614,153.731085116852,182.018209297219,11.7395103485719,23.6727244908163,36.3664755710802,11.2462460747632,7.38088443082997,4.98583690268315,7.81857404897165,13.1976098378028,0,1.94224508923985,1.81394134178851,9.43025398779491,6.496641643377,13.2197113615889,10.5955600198971,2.90826983582004,6.06045543254026,4.74055136903724,6.32511651449993,4.12542172992747,5.7874732978144,0.720244376125241,1.29358683782755,1.07168517515796,1.06404140185364,1.78368817602071,2.46823530903181,4.87143918583359,10.7948985709307,47.8740480152234,29.9918621354748,16.3237390412065,9.68786560175433,6.03129249281559,5.72987251215055,4.92422699235184,16.0314460146418,2.41052892613663,2.05045056957423,5.36605856704379,2.59272338317596,0.753473828018764,0.546776910884101,0.915112692826091,529.482809430859,757.977065784932,404.096723404135,20.0480829783174,1.10717597753397,2.64315307264903,1.944096134792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| |phase1_expression=86.6405262836935,445.641595555464,503.229158764827,525.682799251271,614.098164914222,322.999719158476,234.547091157908,2.7115897922731,468.82644476505,373.33291948358,42.2908381516997,23.4530147446289,0.684802919724823,0.699363219351979,0.333109761815663,1.82227740650843,2.79824751251259,3.94327706697797,1.7824876368746,2.54633791078818,7.90902598404949,0.496454756004426,0.522399578277871,7.35965144849671,5.50582274561208,346.261874361357,235.196049902855,193.277695719242,11.5914285868388,9.8291750606373,11.3082560434205,26.0362576118449,14.1464901144451,0,87.2331891648849,50.0366282529062,159.252097884648,6.27797446105362,14.8453715459522,4.18818995179039,88.2347232046521,21.1744100337118,7.2826552954673,17.877348152532,18.7547322756102,5.50640256485045,1.56478268869608,1.96222640742402,8.78744730937887,14.387812531497,2.93971485413261,5.75010257459886,25.1673909086605,2.90144856804538,4.03312558970957,9.00408026125814,17.1920063963254,34.0343580903112,0.404632921719196,1.5869729378161,1.26766280701236,1.69422266034566,6.22506357277798,182.229692749483,198.762138875962,206.039233334369,91.6776338186318,45.3377600279434,0.933206510776299,0.540023753326763,0.630974884054146,1.14260393761521,2.20868540951614,0.734944795289724,0.958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,0.659431438650969,1.00636407962651,0.52091337055676,1.11673199600552,1.12552522006336,1.68078072554491,2.35702868378934,1.56608848879013,1.3047961207771,119.268754499765,295.484800017531,2044.99396779034,147.992906840798,666.371907033596,75.0187436376566,5.19821133958135,3.58421509677868,4.49422144421606,0.681721290312231,0.259786004602869,1.06001872353102,59.9992968248659,0,2.54805239706646,0,54.555742334826,53.2055717497707,48.0248222764044,15.0722721229159,6.47344709117929,10.3909497345377,2.94925055502431,3.04465478312141,2.7673859670727,2.56228488939458,6.23220147819235,2.01066546127481,48.4502136759373,13.5923395504717,4.42305275974937,9.22071044700232,3.3126227769059,3.39412677194655,29.8226817948995,1.46390398505774,0,34.4867024531598,357.288701276654,439.728701818168,254.267524373202,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.24672826735736,0.973447578406546,12.5262417535889,3.23458123586242,4.54900965180614,4.20883711772948,1.17108398666433,1.37941262660084,1.26043490863744,2.10986744970001,2.9255694635071,1.5373646434182,2.71735001223214,2.84573707812917,1.5089759505299,0.945530400839096,1.75951124163949,3.28793598641362,7.78532297831674,6.61679116392116,8.84863186554157,1.19420560091096,237.348057311873,208.451804762919,186.127092104113,22.3695834338342,21.3418714582798,17.2859579002574,20.8335367314985,15.5443743080449,12.9584374825398,16.2773761325285,18.2425912951741,21.368057653192,5.43047504714485,11.3275550214576,5.75588547775576,19.5907983149945,6.36695334344047,3.89198614405078,0.841159794256509,0.514523061896422,34.363553430315,13.7514294665043,1.06644125267617,3.0190767341857,4.12375876230699,5.24377164020691,3.33567065767305,3.04361001780095,23.7264530772256,7.41145296258049,7.28872105520782,8.55512829776949,6.82374304916921,10.7858329038507,26.5849801345874,17.5244320463843,7.39704813717019,2.28497025219458,2.25415471346161,3.05476991767971,1.74557238450863,2.31448205638051,1.83385957660346,1.62371162777562,0.784993639206874,1.48076596706161,6.22550516883013,2.00214126859313,1.37591296579242,1.79889689907883,2.63718157805054,1.20588579876208,3.56476192493988,4.60313819921297,3.08056930872567,6.31491250332587,4.31304619582064,4.09355042435354,1.5601883655728,2.27320990152401,5.20252499213545,1.92977408545347,9.60716588866344,3.41084541186873,14.1779529504563,2.20668611507745,1.40814148973101,2.01007508930179,3.80869825417622,15.6106918286239,2.83743259391144,4.65075848262427,2.87018583583477,8.02930242107116,4.31712454664739,3.47157740595628,173.409976530163,150.117968733964,3.93411418415229,3.86311444826625,0.963303539926752,1.17211686592203,0.819674726883377,7.32165688892682,6.94118082715765,8.19921363022941,4.73931475012158,52.5731355495614,153.731085116852,182.018209297219,11.7395103485719,23.6727244908163,36.3664755710802,11.2462460747632,7.38088443082997,4.98583690268315,7.81857404897165,13.1976098378028,0,1.94224508923985,1.81394134178851,9.43025398779491,6.496641643377,13.2197113615889,10.5955600198971,2.90826983582004,6.06045543254026,4.74055136903724,6.32511651449993,4.12542172992747,5.7874732978144,0.720244376125241,1.29358683782755,1.07168517515796,1.06404140185364,1.78368817602071,2.46823530903181,4.87143918583359,10.7948985709307,47.8740480152234,29.9918621354748,16.3237390412065,9.68786560175433,6.03129249281559,5.72987251215055,4.92422699235184,16.0314460146418,2.41052892613663,2.05045056957423,5.36605856704379,2.59272338317596,0.753473828018764,0.546776910884101,0.915112692826091,529.482809430859,757.977065784932,404.096723404135,20.0480829783174,1.10717597753397,2.64315307264903,1.944096134792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| ||
|short_description=p1@Atf3 | |||
}} | }} |
Latest revision as of 00:03, 27 September 2015
Short description: | p1@Atf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | 72bp_to_NM_007498, uc007ece.1, uc011wys.1_5end |
EntrezGene: | Atf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.08e-08 | 25 |
intestinal epithelial cell | 9.58e-07 | 9 |
epithelial cell of alimentary canal | 9.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.14e-07 | 11 |
intestine | 1.91e-07 | 31 |
intestinal mucosa | 2.47e-07 | 13 |
wall of intestine | 2.47e-07 | 13 |
gastrointestinal system mucosa | 2.47e-07 | 13 |
mucosa | 4.10e-07 | 15 |
epithelium of mucosa | 9.58e-07 | 9 |
gastrointestinal system epithelium | 9.58e-07 | 9 |
intestinal epithelium | 9.58e-07 | 9 |