FFCP PHASE1:Mm9::chr1:152980097..152980108,+: Difference between revisions
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|id=chr1:152980097..152980108,+
|short_description=p@chr1:152980097..152980108,+
|description=CAGE_peak_at_chr1:152980097..152980108,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=162 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:152980097..152980108,+ | |||
|description=CAGE_peak_at_chr1:152980097..152980108,+ | |||
|id=chr1:152980097..152980108,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.27e-14!5;CL:0000417!2.27e-14!5;CL:0000668!2.27e-14!5;CL:0000412!2.27e-14!5;CL:0000182!2.27e-14!5;CL:0000057!6.23e-09!1;CL:0000632!6.23e-09!1;CL:0000414!7.94e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.05e-20,5;CL:0000057,2.01e-12,1;CL:0000632,2.01e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.48e-26!22;UBERON:0007499!1.48e-26!22;UBERON:0006925!1.48e-26!22;UBERON:0009497!1.48e-26!22;UBERON:0000015!1.48e-26!22;UBERON:0002423!1.48e-26!22;UBERON:0006235!1.48e-26!22;UBERON:0008835!1.48e-26!22;UBERON:0003894!1.48e-26!22;UBERON:0004161!1.48e-26!22;UBERON:0008836!1.48e-26!22;UBERON:0009854!2.24e-25!23;UBERON:0009856!2.24e-25!23;UBERON:0002365!2.69e-23!25;UBERON:0002330!2.69e-23!25;UBERON:0003914!7.19e-15!47;UBERON:0005256!7.19e-15!47;UBERON:0005172!1.52e-11!49;UBERON:0005173!1.52e-11!49;UBERON:0002417!1.52e-11!49;UBERON:0000916!1.52e-11!49;UBERON:0005057!4.63e-11!51;UBERON:0000490!2.44e-10!66;UBERON:0003929!3.37e-10!55;UBERON:0002368!2.79e-09!60;UBERON:0002530!1.67e-08!65;UBERON:0009569!2.32e-08!66;UBERON:0005911!5.83e-08!69;UBERON:0002405!7.79e-08!70;UBERON:0000949!1.36e-07!72;UBERON:0000466!7.67e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.07e-24,22;UBERON:0007499,2.07e-24,22;UBERON:0006925,2.07e-24,22;UBERON:0009497,2.07e-24,22;UBERON:0000015,2.07e-24,22;UBERON:0002423,2.07e-24,22;UBERON:0006235,2.07e-24,22;UBERON:0008835,2.07e-24,22;UBERON:0003894,2.07e-24,22;UBERON:0004161,2.07e-24,22;UBERON:0008836,2.07e-24,22;UBERON:0009854,2.34e-23,23;UBERON:0009856,2.34e-23,23;UBERON:0002365,1.68e-21,25;UBERON:0002330,1.68e-21,25;UBERON:0005256,5.72e-12,45;UBERON:0003914,1.85e-11,47;UBERON:0005172,5.45e-11,49;UBERON:0005173,5.45e-11,49;UBERON:0002417,5.45e-11,49;UBERON:0000916,5.45e-11,49;UBERON:0003929,8.73e-10,55;UBERON:0002368,5.79e-09,60;UBERON:0003104,8.16e-09,61;UBERON:0009142,8.16e-09,61;UBERON:0002530,2.89e-08,65;UBERON:0000490,3.87e-08,66;UBERON:0009569,3.87e-08,66;UBERON:0005911,8.85e-08,69;UBERON:0000949,1.89e-07,72;UBERON:0005177,8.94e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,0,4.31762553310254,11.695975514058,26.4335863387428,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41131567717872,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,2.52578877947112,4.12614051100398,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,0,4.31762553310254,11.695975514058,26.4335863387428,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41131567717872,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,2.52578877947112,4.12614051100398,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:152980097..152980108,+ | |||
}} | }} |
Latest revision as of 23:52, 4 August 2015
Short description: | p@chr1:152980097..152980108, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:152980097..152980108, + |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.05e-20 | 5 |
fibroblast | 2.01e-12 | 1 |
hepatic stellate cell | 2.01e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.07e-24 | 22 |
epithelial sac | 2.07e-24 | 22 |
digestive gland | 2.07e-24 | 22 |
epithelium of foregut-midgut junction | 2.07e-24 | 22 |
anatomical boundary | 2.07e-24 | 22 |
hepatobiliary system | 2.07e-24 | 22 |
foregut-midgut junction | 2.07e-24 | 22 |
hepatic diverticulum | 2.07e-24 | 22 |
liver primordium | 2.07e-24 | 22 |
septum transversum | 2.07e-24 | 22 |
liver bud | 2.07e-24 | 22 |
digestive tract diverticulum | 2.34e-23 | 23 |
sac | 2.34e-23 | 23 |
exocrine gland | 1.68e-21 | 25 |
exocrine system | 1.68e-21 | 25 |
trunk mesenchyme | 5.72e-12 | 45 |
epithelial tube | 1.85e-11 | 47 |
abdomen element | 5.45e-11 | 49 |
abdominal segment element | 5.45e-11 | 49 |
abdominal segment of trunk | 5.45e-11 | 49 |
abdomen | 5.45e-11 | 49 |
gut epithelium | 8.73e-10 | 55 |
endocrine gland | 5.79e-09 | 60 |
mesenchyme | 8.16e-09 | 61 |
entire embryonic mesenchyme | 8.16e-09 | 61 |
gland | 2.89e-08 | 65 |
unilaminar epithelium | 3.87e-08 | 66 |
subdivision of trunk | 3.87e-08 | 66 |
endo-epithelium | 8.85e-08 | 69 |
endocrine system | 1.89e-07 | 72 |
trunk region element | 8.94e-07 | 79 |