FFCP PHASE1:Mm9::chr1:127332009..127332021,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:127332009..127332021,-
|short_description=p4@Actr3
|description=CAGE_peak_4_at_Actr3_5end
|association_with_transcript=45bp_to_ENSMUST00000027579,uc007cke....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74117 | |EntrezGene=74117 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1175 | |||
|TSSclassifier=NA | |||
|UniProt=Q99JY9,Q641P0 | |UniProt=Q99JY9,Q641P0 | ||
|association_with_transcript=45bp_to_ENSMUST00000027579,uc007cke.1_5end | |||
|cluster_id=chr1:127332009..127332021,- | |||
|description=CAGE_peak_4_at_Actr3_5end | |||
|id=chr1:127332009..127332021,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.50e-12!59;UBERON:0004923!2.14e-10!24;UBERON:0000160!8.17e-10!43;UBERON:0000344!4.83e-09!15;UBERON:0001242!7.50e-08!13;UBERON:0000060!7.50e-08!13;UBERON:0001262!7.50e-08!13;UBERON:0004786!7.50e-08!13;UBERON:0004872!3.04e-07!33;UBERON:0004119!9.40e-07!130;UBERON:0000925!9.40e-07!130;UBERON:0006595!9.40e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.14e-13,47;UBERON:0000160,2.63e-11,31;UBERON:0004923,2.13e-10,24;UBERON:0000344,4.82e-09,15;UBERON:0001242,7.49e-08,13;UBERON:0001262,7.49e-08,13;UBERON:0004786,7.49e-08,13;UBERON:0004872,3.04e-07,33 | |||
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|phase1_expression=2.5623815536767,39.4342210632478,36.3999391511629,16.6355316218757,19.5349334679075,20.8170297170743,17.0537227634734,2.7115897922731,1.97104211012333,2.34064526321993,1.02730780935303,1.03703806693937,3.93761678841773,2.44777126773193,3.99731714178795,2.83465374345756,2.79824751251259,11.5143690355757,8.22686601634433,9.76096199135469,2.29616883407888,7.04965753526286,4.4403964153619,24.1588558418044,21.3350631392468,32.7312219545562,24.9841957772263,32.5361561355692,24.7030445293286,28.983464922392,23.5034341294623,0,0,0,7.79899373328441,6.64938581433969,7.9626048942324,46.8755426425337,53.9121387721422,57.064088093144,48.2349820185432,48.4962294320496,57.7757320107073,6.54663453473002,6.08261587317087,6.60768307782054,0.782391344348039,2.8343270329458,4.61340983742391,6.41618666945135,4.33957907038624,0,8.05356509077134,5.07753499407941,5.71359458542189,7.20326420900652,8.30946975822394,8.25075347643908,2.83243045203437,1.05798195854407,1.90149421051854,8.13226876965917,3.55717918444456,7.64914759689189,7.9109309005358,11.3676818391376,3.29560121570245,2.68952813725088,1.65903379693564,1.21505344498522,1.68259969081106,3.42781181284564,0.441737081903227,1.10241719293459,1.34183659425531,0,3.30347642998166,3.44755812830007,1.99688493233117,1.84640802822271,2.56165402086747,1.56274011167028,2.23346399201105,0.56276261003168,1.22238598221448,1.47314292736834,2.13557521198654,2.60959224155421,11.510381386644,8.08615693142605,5.2175607966302,2.58127163094416,3.39985666853875,2.15881276655127,4.54843492213368,4.48026887097336,4.63466586434781,10.9075406449957,10.9110121933205,7.0667914902068,2.67602497575693,6.41632387071589,7.64415719119937,0,6.49473123033642,4.81383744402687,6.0662933401774,7.9928715803342,15.018397251536,3.11728492036132,2.25530924795977,3.65358573974569,3.45923245884088,2.56228488939458,2.93971767839262,5.02666365318702,14.3373081285937,6.79616977523585,8.84610551949874,8.25010934731787,6.18356251689102,4.84875253135222,5.59175283654366,4.09893115816166,2.72280718857492,15.5828803677241,12.9400334466394,11.3981518888747,12.0716715719411,1.64769703345305,1.83000241127451,1.13088916901578,1.39059456153821,2.81287003063364,1.87009240103604,2.92034273521964,3.7680564624617,7.96204611904595,3.53811861807145,2.52530227063769,2.21204753036596,3.21862946206862,2.52086981727489,2.86339153887859,2.38127747029647,1.2811372028485,2.62364828767241,2.84573707812917,1.5089759505299,2.45837904218165,1.75951124163949,2.41115305670332,1.66828349535359,5.92028683087683,4.52720700097476,1.39323986772945,16.1509033082044,13.3820911699652,14.4923384691752,7.66365358381357,4.69052119962192,6.84235833551856,8.75955521665278,6.88674811115913,8.79322543458056,9.06882384526591,6.43856163359086,13.077718345123,12.1774288935976,9.19337798842933,7.86367452594801,6.28659945928929,8.12335426576887,5.09984391289413,2.52347938276953,1.9551876352064,28.7464341195904,2.64450566663544,3.83918850963421,4.18026009348789,4.63922860759536,5.84882221407693,8.00560957841533,8.94060442729028,14.2358718463353,9.55253937399263,12.0640900224129,9.94782360205754,10.9179888786707,15.2799299471218,16.4264917904768,16.7278669533668,2.65535061334314,3.42745537829186,4.50830942692322,3.25842124552503,3.49114476901726,5.75113723100612,5.24863258131335,5.01874503130647,9.26292494264111,7.77402132707343,3.85388415213294,2.00214126859313,2.35870794135844,2.02375901146368,5.07150303471257,3.61765739628625,3.05551022137704,5.17853047411459,6.32327384422638,4.94210543738547,5.75072826109418,5.20997326735905,5.92871578917665,5.05157755894223,4.30553792452589,3.85954817090694,6.28160846566456,4.35830247072115,4.4000543639347,3.22515662972857,4.45911471748154,5.86271901046355,5.95109102215034,8.00047956216975,7.40885177299098,7.75126413770712,8.13219320153184,9.01248230936559,10.5337838938196,6.65385669474953,19.6028669121054,25.5635671394793,6.39293554924747,6.34654516500885,0.80275294993896,3.16471553798949,6.06559297893699,2.52470927204373,4.41711507182759,1.95219372148319,4.09304455692318,6.21318874676635,2.89638276307112,3.96307143104365,2.42886421004937,5.55286130031493,3.16230222357219,0.642642632843614,2.98074178937364,3.20518086601059,4.0721739838394,4.94910368917606,6.63725691699814,4.37005145078967,5.74414758233027,5.28094223316515,4.72483028609236,4.91896236710284,9.56184684722418,6.18007340111759,6.06045543254026,3.79244109522979,2.10837217149998,2.06271086496374,2.38307724027652,3.06103859853227,1.16422815404479,2.57204442037911,3.72414490648775,3.21063871683727,2.79733335023606,2.13125464380219,11.2642419870581,8.89694697628045,9.2621927183084,4.45192882941996,3.22928853391811,4.94565984410878,3.81991500810037,4.10352249362653,14.5740418314925,2.03967832211561,8.20180227829693,4.74689796315412,5.92622487583077,5.27431679613135,6.69801715833023,7.54967971581525,9.68877050964975,5.03825228365169,7.73919853304773,11.4560474161814,2.84702394223022,3.86306987541013,5.72428306355547,8.36353184057875,6.76923947613151,9.03591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| ||
|short_description=p4@Actr3 | |||
}} | }} |
Latest revision as of 07:00, 26 September 2015
Short description: | p4@Actr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Actr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1175 |
Association with transcript: | 45bp_to_ENSMUST00000027579, uc007cke.1_5end |
EntrezGene: | Actr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.14e-13 | 47 |
intestine | 2.63e-11 | 31 |
organ component layer | 2.13e-10 | 24 |
mucosa | 4.82e-09 | 15 |
intestinal mucosa | 7.49e-08 | 13 |
wall of intestine | 7.49e-08 | 13 |
gastrointestinal system mucosa | 7.49e-08 | 13 |
splanchnic layer of lateral plate mesoderm | 3.04e-07 | 33 |