FFCP PHASE1:Mm9::chr19:5846964..5846989,+: Difference between revisions
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|id=chr19:5846964..5846989,+
|short_description=p@chr19:5846964..5846989,+
|description=CAGE_peak_at_chr19:5846964..5846989,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5846964..5846989,+ | |||
|description=CAGE_peak_at_chr19:5846964..5846989,+ | |||
|id=chr19:5846964..5846989,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.02e-21!25;CL:0000223!1.56e-19!20;CL:0002563!2.90e-15!9;CL:0002251!2.90e-15!9;CL:0002076!1.04e-14!15;CL:0000063!1.24e-11!66;CL:0000144!1.80e-11!121;CL:0000012!1.80e-11!121;CL:0000239!1.94e-10!6;CL:0000677!1.94e-10!6;CL:0000212!1.94e-10!6;CL:0000584!1.94e-10!6;CL:0002371!1.35e-09!118;CL:0000075!8.57e-09!7;CL:0000548!2.26e-08!115;CL:0000004!2.26e-08!115;CL:0000255!2.26e-08!115;CL:0002321!1.97e-07!70;CL:0000220!1.97e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.03e-35,20;CL:0000066,9.97e-33,25;CL:0002563,9.24e-31,9;CL:0002251,9.24e-31,9;CL:0002076,8.53e-23,15;CL:0000239,4.30e-18,6;CL:0000677,4.30e-18,6;CL:0000584,4.30e-18,6;CL:0000075,1.69e-15,7;CL:0000182,9.11e-15,5;CL:0002250,1.44e-14,3;CL:0002321,1.04e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.02e-07,6;DOID:0060100,8.40e-07,3;DOID:4045,8.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!2.90e-15!9;UBERON:0004808!2.90e-15!9;UBERON:0001277!2.90e-15!9;UBERON:0000485!4.57e-12!11;UBERON:0001242!7.35e-10!13;UBERON:0000060!7.35e-10!13;UBERON:0001262!7.35e-10!13;UBERON:0004786!7.35e-10!13;UBERON:0000344!2.99e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.24e-31,9;UBERON:0004808,9.24e-31,9;UBERON:0001277,9.24e-31,9;UBERON:0000485,5.28e-25,11;UBERON:0001242,5.16e-21,13;UBERON:0001262,5.16e-21,13;UBERON:0004786,5.16e-21,13;UBERON:0000344,4.38e-18,15;UBERON:0000490,4.74e-11,66;UBERON:0004923,6.27e-11,24;UBERON:0003929,7.62e-10,55;UBERON:0000160,3.14e-08,31;UBERON:0005911,1.90e-07,69 | |||
|phase1_expression=0,1.39590163055744,2.72999543633722,2.41971369045464,1.50268718983904,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0.430761996159075,1.50829862880122,0,0,0,1.27006134691926,0,0,2.88851619751275,1.66234645358492,3.87921776898501,1.67412652294763,0,1.57057123192139,7.64700934440319,2.04913645487534,2.91306211818692,0,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,13.0439019915755,0.860423876981386,2.03991400112325,2.15881276655127,0,1.34408066129201,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.72999543633722,2.41971369045464,1.50268718983904,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0.430761996159075,1.50829862880122,0,0,0,1.27006134691926,0,0,2.88851619751275,1.66234645358492,3.87921776898501,1.67412652294763,0,1.57057123192139,7.64700934440319,2.04913645487534,2.91306211818692,0,0.506884656097573,0.550640256485045,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,13.0439019915755,0.860423876981386,2.03991400112325,2.15881276655127,0,1.34408066129201,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:5846964..5846989,+ | |||
}} | }} |
Latest revision as of 10:37, 4 August 2015
Short description: | p@chr19:5846964..5846989, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5846964..5846989, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.03e-35 | 20 |
epithelial cell | 9.97e-33 | 25 |
intestinal epithelial cell | 9.24e-31 | 9 |
epithelial cell of alimentary canal | 9.24e-31 | 9 |
endo-epithelial cell | 8.53e-23 | 15 |
brush border epithelial cell | 4.30e-18 | 6 |
gut absorptive cell | 4.30e-18 | 6 |
enterocyte | 4.30e-18 | 6 |
columnar/cuboidal epithelial cell | 1.69e-15 | 7 |
hepatocyte | 9.11e-15 | 5 |
intestinal crypt stem cell | 1.44e-14 | 3 |
embryonic cell | 1.04e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.24e-31 | 9 |
gastrointestinal system epithelium | 9.24e-31 | 9 |
intestinal epithelium | 9.24e-31 | 9 |
simple columnar epithelium | 5.28e-25 | 11 |
intestinal mucosa | 5.16e-21 | 13 |
wall of intestine | 5.16e-21 | 13 |
gastrointestinal system mucosa | 5.16e-21 | 13 |
mucosa | 4.38e-18 | 15 |
unilaminar epithelium | 4.74e-11 | 66 |
organ component layer | 6.27e-11 | 24 |
gut epithelium | 7.62e-10 | 55 |
intestine | 3.14e-08 | 31 |
endo-epithelium | 1.90e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.02e-07 | 6 |
musculoskeletal system cancer | 8.40e-07 | 3 |
muscle cancer | 8.40e-07 | 3 |