FFCP PHASE1:Mm9::chr19:34704299..34704303,-: Difference between revisions
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|id=chr19:34704299..34704303,-
|short_description=p1@2010002M12Rik
|description=CAGE_peak_1_at_2010002M12Rik_5end
|association_with_transcript=0bp_to_ENSMUST0000011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=112419 | |EntrezGene=112419 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U687 | |UniProt=Q3U687 | ||
|association_with_transcript=0bp_to_ENSMUST00000112463_5end | |||
|cluster_id=chr19:34704299..34704303,- | |||
|description=CAGE_peak_1_at_2010002M12Rik_5end | |||
|id=chr19:34704299..34704303,- | |||
|ontology_enrichment_celltype=CL:0002563!4.45e-09!9;CL:0002251!4.45e-09!9;CL:0000239!5.43e-08!6;CL:0000677!5.43e-08!6;CL:0000212!5.43e-08!6;CL:0000584!5.43e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.46e-12,6;CL:0000677,7.46e-12,6;CL:0000584,7.46e-12,6;CL:0000075,4.97e-10,7;CL:0002563,1.34e-07,9;CL:0002251,1.34e-07,9;CL:0000682,5.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.13e-17!43;UBERON:0005409!1.66e-16!59;UBERON:0000344!2.42e-15!15;UBERON:0001242!1.56e-13!13;UBERON:0000060!1.56e-13!13;UBERON:0001262!1.56e-13!13;UBERON:0004786!1.56e-13!13;UBERON:0004923!4.08e-11!24;UBERON:0003350!4.45e-09!9;UBERON:0004808!4.45e-09!9;UBERON:0001277!4.45e-09!9;UBERON:0000485!5.20e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.28e-32,31;UBERON:0005409,1.24e-22,47;UBERON:0000344,7.16e-17,15;UBERON:0001242,4.55e-14,13;UBERON:0001262,4.55e-14,13;UBERON:0004786,4.55e-14,13;UBERON:0004923,1.97e-09,24;UBERON:0002108,1.46e-08,4;UBERON:0003350,1.34e-07,9;UBERON:0004808,1.34e-07,9;UBERON:0001277,1.34e-07,9;UBERON:0000331,9.89e-07,3;UBERON:0002116,9.89e-07,3;UBERON:0001204,9.89e-07,3;UBERON:0001168,9.89e-07,3 | |||
|phase1_expression=0,62.1176225598063,40.4949323056687,26.0119221723874,26.5474736871564,4.70061961353291,5.84031601488814,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,6.39969691173627,4.5881856213434,35.6023817751313,25.4149577733854,27.3648465511079,35.9144262772547,25.9591033652729,9.97787297948871,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,5.02237956884289,6.2506827561904,6.80580867165938,9.99993529652724,7.5135003345429,13.5942898848723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8757489284563,25.1228038330367,0,0,0.38660238396628,4.84040459096022,13.3426826306922,19.0225626112559,24.2009821387701,35.7396731751104,42.7269854960458,36.4090343835306,38.2129610753476,19.7740269903929,19.6685625385972,21.706398784726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,10.8539883130653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.4799303560239,0,0,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,2.40198820120795,0,0.0826534557253359,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,0.824140228955577,0.64183841918363,0,0.25347929989024,0.565879024158229,1.21733959710847,0.768301828858431,1.60819313075717,0.952587382566147,1.0429589335037,1.15745532278223,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,1.90748951957857,0.726732083161643,0.188218760830661,0.592302255241736,1.09756783723664,0.789209134313529,0.407412341537585,1.12228454331548,0.711810108745045,0.985044823755635,1.63692417267876,1.08455788830176,0.578719832943424,0,1.40358965067245,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,62.1176225598063,40.4949323056687,26.0119221723874,26.5474736871564,4.70061961353291,5.84031601488814,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,6.39969691173627,4.5881856213434,35.6023817751313,25.4149577733854,27.3648465511079,35.9144262772547,25.9591033652729,9.97787297948871,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,5.02237956884289,6.2506827561904,6.80580867165938,9.99993529652724,7.5135003345429,13.5942898848723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8757489284563,25.1228038330367,0,0,0.38660238396628,4.84040459096022,13.3426826306922,19.0225626112559,24.2009821387701,35.7396731751104,42.7269854960458,36.4090343835306,38.2129610753476,19.7740269903929,19.6685625385972,21.706398784726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,10.8539883130653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.4799303560239,0,0,0.206386867963223,0.555583582109135,0,0,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0,2.40198820120795,0,0.0826534557253359,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,0.824140228955577,0.64183841918363,0,0.25347929989024,0.565879024158229,1.21733959710847,0.768301828858431,1.60819313075717,0.952587382566147,1.0429589335037,1.15745532278223,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,1.90748951957857,0.726732083161643,0.188218760830661,0.592302255241736,1.09756783723664,0.789209134313529,0.407412341537585,1.12228454331548,0.711810108745045,0.985044823755635,1.63692417267876,1.08455788830176,0.578719832943424,0,1.40358965067245,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@2010002M12Rik | |||
}} | }} |
Latest revision as of 16:05, 25 September 2015
Short description: | p1@2010002M12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010002M12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000112463_5end |
EntrezGene: | 2010002M12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.46e-12 | 6 |
gut absorptive cell | 7.46e-12 | 6 |
enterocyte | 7.46e-12 | 6 |
columnar/cuboidal epithelial cell | 4.97e-10 | 7 |
intestinal epithelial cell | 1.34e-07 | 9 |
epithelial cell of alimentary canal | 1.34e-07 | 9 |
M cell of gut | 5.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.28e-32 | 31 |
gastrointestinal system | 1.24e-22 | 47 |
mucosa | 7.16e-17 | 15 |
intestinal mucosa | 4.55e-14 | 13 |
wall of intestine | 4.55e-14 | 13 |
gastrointestinal system mucosa | 4.55e-14 | 13 |
organ component layer | 1.97e-09 | 24 |
small intestine | 1.46e-08 | 4 |
epithelium of mucosa | 1.34e-07 | 9 |
gastrointestinal system epithelium | 1.34e-07 | 9 |
intestinal epithelium | 1.34e-07 | 9 |
ileal mucosa | 9.89e-07 | 3 |
ileum | 9.89e-07 | 3 |
mucosa of small intestine | 9.89e-07 | 3 |
wall of small intestine | 9.89e-07 | 3 |