FFCP PHASE1:Mm9::chr19:29485468..29485471,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:29485468..29485471,+
|short_description=p1@Pdcd1lg2
|description=CAGE_peak_1_at_Pdcd1lg2_5end
|association_with_transcript=59bp_to_ENSMUST00000112576,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=58205 | |EntrezGene=58205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2671 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUL5,Q3U304 | |UniProt=Q9WUL5,Q3U304 | ||
|association_with_transcript=59bp_to_ENSMUST00000112576,NM_021396,uc008hdk.2_5end | |||
|cluster_id=chr19:29485468..29485471,+ | |||
|description=CAGE_peak_1_at_Pdcd1lg2_5end | |||
|id=chr19:29485468..29485471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.80e-30!23;UBERON:0000974!3.80e-30!23;UBERON:0004807!3.80e-30!23;UBERON:0005058!3.80e-30!23;UBERON:0003351!3.80e-30!23;UBERON:0009113!3.80e-30!23;UBERON:0003295!3.80e-30!23;UBERON:0009722!3.80e-30!23;UBERON:0005562!3.80e-30!23;UBERON:0007690!3.80e-30!23;UBERON:0006562!8.39e-29!24;UBERON:0003408!8.39e-29!24;UBERON:0001557!8.39e-29!24;UBERON:0001042!8.39e-29!24;UBERON:0008814!8.39e-29!24;UBERON:0009145!8.39e-29!24;UBERON:0000072!2.30e-25!27;UBERON:0004177!1.81e-23!29;UBERON:0000063!4.51e-19!35;UBERON:0000065!1.51e-18!41;UBERON:0001004!4.75e-18!42;UBERON:0002193!1.05e-15!48;UBERON:0005057!1.82e-14!51;UBERON:0002390!2.41e-14!45;UBERON:0003061!2.41e-14!45;UBERON:0003929!3.06e-13!55;UBERON:0002530!1.38e-12!65;UBERON:0002368!6.17e-12!60;UBERON:0005911!1.14e-11!69;UBERON:0002405!1.29e-11!70;UBERON:0000490!1.25e-10!66;UBERON:0000949!1.53e-09!72;UBERON:0001041!4.23e-08!92;UBERON:0000153!5.83e-08!94;UBERON:0007811!1.43e-07!86;UBERON:0000077!1.51e-07!97;UBERON:0003081!1.87e-07!88;UBERON:0000064!1.95e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.06e-23,1;UBERON:0001097,3.06e-23,1;UBERON:0003968,3.06e-23,1;UBERON:0001467,3.06e-23,1;UBERON:0002370,2.33e-09,23;UBERON:0000974,2.33e-09,23;UBERON:0004807,2.33e-09,23;UBERON:0005058,2.33e-09,23;UBERON:0003351,2.33e-09,23;UBERON:0009113,2.33e-09,23;UBERON:0003295,2.33e-09,23;UBERON:0009722,2.33e-09,23;UBERON:0005562,2.33e-09,23;UBERON:0007690,2.33e-09,23;UBERON:0006562,5.26e-09,24;UBERON:0003408,5.26e-09,24;UBERON:0001557,5.26e-09,24;UBERON:0001042,5.26e-09,24;UBERON:0008814,5.26e-09,24;UBERON:0009145,5.26e-09,24;UBERON:0002465,1.13e-08,3;UBERON:0000072,4.25e-08,27;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0004177,1.35e-07,29;UBERON:0005057,1.35e-07,29 | |||
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|short_description=p1@Pdcd1lg2 | |||
}} | }} |
Latest revision as of 14:33, 25 September 2015
Short description: | p1@Pdcd1lg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdcd1lg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2671 |
Association with transcript: | 59bp_to_ENSMUST00000112576, NM_021396, uc008hdk.2_5end |
EntrezGene: | Pdcd1lg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 3.06e-23 | 1 |
axillary lymph node | 3.06e-23 | 1 |
peripheral lymph node | 3.06e-23 | 1 |
shoulder | 3.06e-23 | 1 |
thymus | 2.33e-09 | 23 |
neck | 2.33e-09 | 23 |
respiratory system epithelium | 2.33e-09 | 23 |
hemolymphoid system gland | 2.33e-09 | 23 |
pharyngeal epithelium | 2.33e-09 | 23 |
thymic region | 2.33e-09 | 23 |
pharyngeal gland | 2.33e-09 | 23 |
entire pharyngeal arch endoderm | 2.33e-09 | 23 |
thymus primordium | 2.33e-09 | 23 |
early pharyngeal endoderm | 2.33e-09 | 23 |
pharynx | 5.26e-09 | 24 |
gland of gut | 5.26e-09 | 24 |
upper respiratory tract | 5.26e-09 | 24 |
chordate pharynx | 5.26e-09 | 24 |
pharyngeal arch system | 5.26e-09 | 24 |
pharyngeal region of foregut | 5.26e-09 | 24 |
lymphoid system | 1.13e-08 | 3 |
segment of respiratory tract | 4.25e-08 | 27 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
hemopoietic organ | 1.35e-07 | 29 |
immune organ | 1.35e-07 | 29 |