FFCP PHASE1:Mm9::chr19:11092541..11092550,-: Difference between revisions
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|id=chr19:11092541..11092550,-
|short_description=p5@Ms4a18
|description=CAGE_peak_5_at_Ms4a18_5end
|association_with_transcript=-88bp_to_NM_001251849,uc008grm.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76002 | |EntrezGene=76002 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_NM_001251849,uc008grm.1_5end | |||
|cluster_id=chr19:11092541..11092550,- | |||
|description=CAGE_peak_5_at_Ms4a18_5end | |||
|id=chr19:11092541..11092550,- | |||
|ontology_enrichment_celltype=CL:0002563!3.40e-17!9;CL:0002251!3.40e-17!9;CL:0000239!9.51e-16!6;CL:0000677!9.51e-16!6;CL:0000212!9.51e-16!6;CL:0000584!9.51e-16!6;CL:0000075!2.17e-13!7;CL:0000066!1.40e-10!25;CL:0002076!9.32e-10!15;CL:0000473!4.02e-09!3;CL:0000627!4.02e-09!3;CL:0000682!4.02e-09!3;CL:0000223!5.63e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.68e-19,6;CL:0000677,5.68e-19,6;CL:0000584,5.68e-19,6;CL:0000075,3.02e-16,7;CL:0000682,8.53e-15,3;CL:0002563,1.32e-12,9;CL:0002251,1.32e-12,9;CL:0000066,7.63e-11,25;CL:0002076,1.75e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.07e-31!43;UBERON:0000344!1.02e-26!15;UBERON:0005409!3.52e-23!59;UBERON:0001242!3.15e-22!13;UBERON:0000060!3.15e-22!13;UBERON:0001262!3.15e-22!13;UBERON:0004786!3.15e-22!13;UBERON:0003350!3.40e-17!9;UBERON:0004808!3.40e-17!9;UBERON:0001277!3.40e-17!9;UBERON:0004923!1.42e-15!24;UBERON:0000485!8.19e-14!11;UBERON:0001007!2.35e-09!128;UBERON:0001555!2.35e-09!128;UBERON:0007026!2.35e-09!128;UBERON:0004119!4.08e-09!130;UBERON:0000925!4.08e-09!130;UBERON:0006595!4.08e-09!130;UBERON:0000331!1.04e-08!3;UBERON:0002116!1.04e-08!3;UBERON:0001204!1.04e-08!3;UBERON:0001168!1.04e-08!3;UBERON:0004921!9.89e-08!126;UBERON:0004185!9.89e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.54e-30,31;UBERON:0000344,2.18e-28,15;UBERON:0001242,2.30e-21,13;UBERON:0001262,2.30e-21,13;UBERON:0004786,2.30e-21,13;UBERON:0005409,5.55e-19,47;UBERON:0002108,5.85e-18,4;UBERON:0004923,3.34e-17,24;UBERON:0000331,4.47e-14,3;UBERON:0002116,4.47e-14,3;UBERON:0001204,4.47e-14,3;UBERON:0001168,4.47e-14,3;UBERON:0003350,1.32e-12,9;UBERON:0004808,1.32e-12,9;UBERON:0001277,1.32e-12,9;UBERON:0000485,2.79e-10,11;UBERON:0001962,1.75e-09,2;UBERON:0001961,1.75e-09,2;UBERON:0001744,1.75e-09,2;UBERON:0001007,2.07e-08,116;UBERON:0001555,2.07e-08,116;UBERON:0007026,2.07e-08,116;UBERON:0004119,3.20e-08,118;UBERON:0000925,3.20e-08,118;UBERON:0006595,3.20e-08,118 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,1.51232105653415,2.50447864973174,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.37645568640302,4.59385571292016,2.58457197695445,2.58565479223067,1.90023419456374,2.52030129759931,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17340679996253,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0,2.69645822596266,1.72910439899755,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,5.23463111459042,4.54999239389536,1.51232105653415,2.50447864973174,2.01455126294268,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.37645568640302,4.59385571292016,2.58457197695445,2.58565479223067,1.90023419456374,2.52030129759931,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17340679996253,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0,2.69645822596266,1.72910439899755,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p5@Ms4a18 | |||
}} | }} |
Latest revision as of 21:19, 1 October 2015
Short description: | p5@Ms4a18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ms4a18_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -88bp_to_NM_001251849, uc008grm.1_5end |
EntrezGene: | Ms4a18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.68e-19 | 6 |
gut absorptive cell | 5.68e-19 | 6 |
enterocyte | 5.68e-19 | 6 |
columnar/cuboidal epithelial cell | 3.02e-16 | 7 |
M cell of gut | 8.53e-15 | 3 |
intestinal epithelial cell | 1.32e-12 | 9 |
epithelial cell of alimentary canal | 1.32e-12 | 9 |
epithelial cell | 7.63e-11 | 25 |
endo-epithelial cell | 1.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.54e-30 | 31 |
mucosa | 2.18e-28 | 15 |
intestinal mucosa | 2.30e-21 | 13 |
wall of intestine | 2.30e-21 | 13 |
gastrointestinal system mucosa | 2.30e-21 | 13 |
gastrointestinal system | 5.55e-19 | 47 |
small intestine | 5.85e-18 | 4 |
organ component layer | 3.34e-17 | 24 |
ileal mucosa | 4.47e-14 | 3 |
ileum | 4.47e-14 | 3 |
mucosa of small intestine | 4.47e-14 | 3 |
wall of small intestine | 4.47e-14 | 3 |
epithelium of mucosa | 1.32e-12 | 9 |
gastrointestinal system epithelium | 1.32e-12 | 9 |
intestinal epithelium | 1.32e-12 | 9 |
simple columnar epithelium | 2.79e-10 | 11 |
gut-associated lymphoid tissue | 1.75e-09 | 2 |
mucosa-associated lymphoid tissue | 1.75e-09 | 2 |
lymphoid tissue | 1.75e-09 | 2 |
digestive system | 2.07e-08 | 116 |
digestive tract | 2.07e-08 | 116 |
primitive gut | 2.07e-08 | 116 |
endoderm-derived structure | 3.20e-08 | 118 |
endoderm | 3.20e-08 | 118 |
presumptive endoderm | 3.20e-08 | 118 |