FFCP PHASE1:Mm9::chr18:75456969..75456982,-: Difference between revisions
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|id=chr18:75456969..75456982,-
|short_description=p2@2010010A06Rik
|description=CAGE_peak_2_at_2010010A06Rik_5end
|association_with_transcript=0bp_to_NR_045393,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100503117 | |EntrezGene=100503117 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_045393,NR_045394,uc008fqc.1_5end | |||
|cluster_id=chr18:75456969..75456982,- | |||
|description=CAGE_peak_2_at_2010010A06Rik_5end | |||
|id=chr18:75456969..75456982,- | |||
|ontology_enrichment_celltype=CL:0000239!3.74e-11!6;CL:0000677!3.74e-11!6;CL:0000212!3.74e-11!6;CL:0000584!3.74e-11!6;CL:0000075!2.09e-09!7;CL:0002563!2.60e-09!9;CL:0002251!2.60e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.05e-19,6;CL:0000677,4.05e-19,6;CL:0000584,4.05e-19,6;CL:0000075,2.65e-16,7;CL:0002563,1.53e-12,9;CL:0002251,1.53e-12,9;CL:0000682,1.86e-10,3;CL:0000066,4.41e-09,25;CL:0002076,2.89e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.32e-22!43;UBERON:0000344!3.15e-18!15;UBERON:0005409!3.87e-18!59;UBERON:0001242!2.71e-15!13;UBERON:0000060!2.71e-15!13;UBERON:0001262!2.71e-15!13;UBERON:0004786!2.71e-15!13;UBERON:0004923!4.84e-10!24;UBERON:0003350!2.60e-09!9;UBERON:0004808!2.60e-09!9;UBERON:0001277!2.60e-09!9;UBERON:0000485!2.30e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-45,31;UBERON:0005409,3.99e-31,47;UBERON:0000344,2.40e-28,15;UBERON:0001242,4.48e-23,13;UBERON:0001262,4.48e-23,13;UBERON:0004786,4.48e-23,13;UBERON:0004923,7.97e-17,24;UBERON:0002108,1.17e-12,4;UBERON:0003350,1.53e-12,9;UBERON:0004808,1.53e-12,9;UBERON:0001277,1.53e-12,9;UBERON:0001007,2.93e-12,116;UBERON:0001555,2.93e-12,116;UBERON:0007026,2.93e-12,116;UBERON:0004119,5.72e-12,118;UBERON:0000925,5.72e-12,118;UBERON:0006595,5.72e-12,118;UBERON:0000485,3.81e-10,11;UBERON:0004921,3.82e-10,114;UBERON:0000331,1.03e-09,3;UBERON:0002116,1.03e-09,3;UBERON:0001204,1.03e-09,3;UBERON:0001168,1.03e-09,3;UBERON:0001962,5.68e-07,2;UBERON:0001961,5.68e-07,2;UBERON:0001744,5.68e-07,2 | |||
|phase1_expression=0,11.1672130444596,6.3699893514535,9.67885476181856,12.0214975187123,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.67054849707472,9.76194338995534,3.4460959692726,5.17130958446134,3.23039813075836,3.02436155711917,3.10422714917427,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,3.70230793328962,0,0,0,0.80673409849337,0.889512175379481,3.04361001780095,5.69434873853414,1.4822905925161,4.77536896720512,2.98434708061726,4.28920991662064,2.69645822596266,6.05186539649144,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.468207537349412,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,11.1672130444596,6.3699893514535,9.67885476181856,12.0214975187123,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,3.67054849707472,9.76194338995534,3.4460959692726,5.17130958446134,3.23039813075836,3.02436155711917,3.10422714917427,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13096932500619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,3.70230793328962,0,0,0,0.80673409849337,0.889512175379481,3.04361001780095,5.69434873853414,1.4822905925161,4.77536896720512,2.98434708061726,4.28920991662064,2.69645822596266,6.05186539649144,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.50695859978048,0,0.468207537349412,0.256100609619477,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@2010010A06Rik | |||
}} | }} |
Latest revision as of 17:36, 1 October 2015
Short description: | p2@2010010A06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2010010A06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NR_045393, NR_045394, uc008fqc.1_5end |
EntrezGene: | 2010010A06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.05e-19 | 6 |
gut absorptive cell | 4.05e-19 | 6 |
enterocyte | 4.05e-19 | 6 |
columnar/cuboidal epithelial cell | 2.65e-16 | 7 |
intestinal epithelial cell | 1.53e-12 | 9 |
epithelial cell of alimentary canal | 1.53e-12 | 9 |
M cell of gut | 1.86e-10 | 3 |
epithelial cell | 4.41e-09 | 25 |
endo-epithelial cell | 2.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.64e-45 | 31 |
gastrointestinal system | 3.99e-31 | 47 |
mucosa | 2.40e-28 | 15 |
intestinal mucosa | 4.48e-23 | 13 |
wall of intestine | 4.48e-23 | 13 |
gastrointestinal system mucosa | 4.48e-23 | 13 |
organ component layer | 7.97e-17 | 24 |
small intestine | 1.17e-12 | 4 |
epithelium of mucosa | 1.53e-12 | 9 |
gastrointestinal system epithelium | 1.53e-12 | 9 |
intestinal epithelium | 1.53e-12 | 9 |
digestive system | 2.93e-12 | 116 |
digestive tract | 2.93e-12 | 116 |
primitive gut | 2.93e-12 | 116 |
endoderm-derived structure | 5.72e-12 | 118 |
endoderm | 5.72e-12 | 118 |
presumptive endoderm | 5.72e-12 | 118 |
simple columnar epithelium | 3.81e-10 | 11 |
subdivision of digestive tract | 3.82e-10 | 114 |
ileal mucosa | 1.03e-09 | 3 |
ileum | 1.03e-09 | 3 |
mucosa of small intestine | 1.03e-09 | 3 |
wall of small intestine | 1.03e-09 | 3 |
gut-associated lymphoid tissue | 5.68e-07 | 2 |
mucosa-associated lymphoid tissue | 5.68e-07 | 2 |
lymphoid tissue | 5.68e-07 | 2 |