FFCP PHASE1:Mm9::chr17:71965559..71965599,+: Difference between revisions

Latest revision as of 20:42, 26 September 2015

Short description:	p1@Wdr43
Species:	Mouse (Mus musculus)
DPI dataset:	NA
TSS-like-by-RIKEN-classifier(Yes/No):	NA
DHS support(Yes/No):	NA
Description:	CAGE_peak_1_at_Wdr43_5end
Coexpression cluster:	MCL_coexpression_mm9:101
Association with transcript:	4bp_to_ENSMUST00000047086, NM_175639_5end
EntrezGene:	Wdr43
Link to Zenbu:	ZENBU

View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser

CAGE Expression

Sample	p1@Wdr43
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	39.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	7.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	8.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	8.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	7.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	46.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	50.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	83.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	429.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	484.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	323.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	338.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	108.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	101.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	81.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	67.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	37.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	91.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	102.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	78.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	21.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	68.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	76.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	34.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	27.76
GP2+ M cell, pool1.CNhs13228.11845-124H9	20.10
GP2+ M cell, pool2.CNhs13231.11846-124I1	26.28
GP2+ M cell, pool3.CNhs13240.11847-124I2	23.92
Ileum epithelium, pool1.CNhs13199.10252-104B9	24.89
Ileum epithelium, pool2.CNhs13232.10253-104C1	26.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	31.71
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	128.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	91.03
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	63.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	79.43
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	77.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	80.24
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	12.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	15.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	17.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	7.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	7.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	11.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	43.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	45.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	51.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	10.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	11.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	5.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	15.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	10.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	7.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	95.30
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	97.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	111.58
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	37.30
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	31.23
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	23.72
Mouse Granule cells, donor1.CNhs12131.11713-123C3	22.66
Mouse Granule cells, donor2.CNhs12357.11731-123E3	17.46
Mouse Granule cells, donor3.CNhs12108.11636-122C7	16.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	14.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	6.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	8.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	9.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	9.95
Mouse Microglia, donor1.CNhs12629.11718-123C8	6.89
Mouse Microglia, donor2.CNhs12634.11736-123E8	7.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	31.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	22.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	30.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	15.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	30.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	23.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	34.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	22.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	29.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	28.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	23.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	21.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	27.09
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	18.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	20.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	28.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	32.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	34.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	32.43
Mouse Schwann, donor1.CNhs12507.11728-123D9	79.21
Mouse Schwann, donor2.CNhs12573.11746-123F9	42.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	53.34
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	30.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	89.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	24.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	35.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	58.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	33.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	34.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	27.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	25.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	37.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	34.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	50.96
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	35.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	55.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	62.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	66.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	38.02
accessory axillary lymph node, adult.CNhs10475.1063-29H9	114.71
adrenal gland, adult.CNhs10508.49-24D7	39.78
adrenal gland, embryo E14.CNhs11038.406-44C5	54.47
adrenal gland, embryo E16.CNhs11004.1254-43D6	48.71
adrenal gland, embryo E17.CNhs11043.1263-45I1	37.13
adrenal gland, embryo E18.CNhs11026.1262-18F5	31.20
adrenal gland, neonate N00.CNhs11191.1311-23C1	42.80
adrenal gland, neonate N25.CNhs11223.1377-27I3	31.79
amnion, adult pregnant day17.5.CNhs10488.583-22A8	32.38
aorta, adult.CNhs10498.46-23H1	43.52
bone (os femoris), adult.CNhs10483.56-12G2	37.15
bone (os femoris), neonate N02.CNhs11227.1985-43F5	52.25
bone (os femoris), neonate N16.CNhs11225.1525-43A6	46.82
bone (os femoris), neonate N20.CNhs11195.1350-25C3	51.40
cecum, adult.CNhs10467.37-13H4	33.55
cerebellum, adult.CNhs10494.15-8B2	34.26
cerebellum, neonate N30.CNhs11135.1395-42I2	33.93
colon, adult.CNhs10468.36-18H7	33.72
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	112.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	92.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	91.62
corpora quadrigemina, adult.CNhs10501.16-22A4	28.16
corpus striatum, adult.CNhs10487.19-21D8	33.86
corpus striatum, neonate N00.CNhs11226.630-43F1	46.62
cortex, adult.CNhs10473.12-14D5	29.38
cortex, neonate N30.CNhs11107.1392-42F2	29.92
diencephalon, adult.CNhs10482.20-12F2	24.31
diencephalon, neonate N30.CNhs11201.1388-42B2	33.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	53.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	41.43
epididymis, adult.CNhs10490.58-23B2	38.92
eyeball, adult.CNhs10484.31-12G4	37.46
eyeball, embryo E12.CNhs11016.345-16C6	53.35
eyeball, embryo E14.CNhs10521.399-16E2	48.97
eyeball, embryo E15.CNhs10593.426-16C9	49.88
eyeball, embryo E17.CNhs11023.1261-18D4	43.40
eyeball, neonate N00.CNhs11207.633-15C6	49.94
eyeball, neonate N01.CNhs11140.1532-43E7	43.69
eyeball, neonate N02.CNhs11205.1551-44G8	43.01
eyeball, neonate N16.CNhs11188.777-19A2	36.99
forelimb, embryo E11.CNhs10596.335-25E2	53.89
forelimb, embryo E12.CNhs10600.359-14H2	63.54
forelimb, embryo E13.CNhs10589.384-1E2	58.94
forelimb, embryo E14.CNhs10577.413-26A8	51.73
forelimb, embryo E15.CNhs11007.437-20E7	55.05
forelimb, embryo E17.CNhs10598.1517-43C4	60.25
forelimb, embryo E18.CNhs11008.1520-43B5	50.83
gonad, embryo E13.CNhs11044.1564-45I6	65.68
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	120.78
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	104.74
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	92.35
heart, embryo E11.CNhs10586.331-24E9	53.65
heart, embryo E12.CNhs11015.353-12F5	49.25
heart, embryo E13.CNhs11013.376-3I9	43.03
heart, embryo E14.CNhs10597.403-26D4	43.09
heart, embryo E15.CNhs11017.431-16C8	37.19
heart, embryo E16.CNhs11021.457-17C6	39.80
heart, embryo E17.CNhs11025.479-18E5	40.00
heart, embryo E18.CNhs11030.1283-20G3	34.07
heart, neonate N00.CNhs11213.639-21E3	43.79
heart, neonate N03.CNhs11221.1349-25I2	40.15
heart, neonate N10.CNhs11118.749-24G1	36.94
heart, neonate N16.CNhs11209.782-15G1	36.16
heart, neonate N20.CNhs11127.821-26I6	33.19
heart, neonate N25.CNhs11196.1351-25D3	40.18
heart, neonate N30.CNhs11202.1390-42D2	33.01
hippocampus, adult.CNhs10478.13-16E8	32.38
hippocampus, neonate N00.CNhs11228.627-43G1	46.72
intestinal mucosa, adult.CNhs10506.860-29I3	10.90
intestine, adult.CNhs10496.178-9A3	43.90
intestine, embryo E12.CNhs11019.1251-16I5	52.26
intestine, embryo E13.CNhs11010.381-16D5	62.24
intestine, embryo E15.CNhs10602.976-16D8	68.30
intestine, embryo E16.CNhs10585.463-22H4	55.06
intestine, embryo E17.CNhs10582.482-18D3	40.25
intestine, embryo E18.CNhs10526.1289-20F7	38.81
intestine, neonate N00.CNhs11126.644-26D1	33.69
intestine, neonate N01.CNhs11192.1322-23E9	36.89
intestine, neonate N06.CNhs11102.688-20B8	37.95
intestine, neonate N07.CNhs11095.720-20F2	36.81
intestine, neonate N10.CNhs11098.755-23A5	38.80
intestine, neonate N20.CNhs11187.827-18D1	40.45
intestine, neonate N25.CNhs11121.1352-25E3	26.80
intestine, neonate N30.CNhs11131.1384-42G1	31.46
kidney, embryo E14.CNhs10606.411-4I9	36.23
kidney, embryo E15.CNhs10997.434-16F8	67.86
kidney, embryo E16.CNhs10584.464-22A5	69.88
kidney, embryo E17.CNhs11028.483-18I2	55.80
kidney, embryo E18.CNhs11001.1288-20C7	45.97
kidney, neonate N00.CNhs11214.646-21G7	57.44
kidney, neonate N10.CNhs11206.758-6D5	37.88
kidney, neonate N20.CNhs11113.832-19I1	29.82
kidney, neonate N25.CNhs11122.1353-25F3	28.89
kidney, neonate N30.CNhs11203.1385-42H1	24.80
liver, adult pregnant day01.CNhs10466.508-5B2	45.65
liver, embryo E12.CNhs10601.355-15F8	91.76
liver, embryo E13.CNhs10524.378-3H6	86.49
liver, embryo E14.CNhs10594.409-16E1	74.20
liver, embryo E15.CNhs10520.433-16D7	63.90
liver, embryo E16.CNhs10523.462-17F5	52.34
liver, embryo E17.CNhs10510.481-18A3	43.80
liver, embryo E18.CNhs10579.499-43G4	49.48
liver, neonate N00.CNhs11117.641-24F4	65.02
liver, neonate N03.CNhs11123.1345-25G2	39.81
liver, neonate N06.CNhs11101.684-20A8	41.69
liver, neonate N07.CNhs11103.716-20H2	35.35
liver, neonate N10.CNhs11115.751-24B9	37.13
liver, neonate N20.CNhs11220.823-25A3	38.90
liver, neonate N25.CNhs11198.1368-26H1	33.19
liver, neonate N30.CNhs11106.1382-42D1	35.70
lung, adult.CNhs10474.28-22B1	36.21
lung, embryo E12.CNhs10522.354-16G2	60.26
lung, embryo E14.CNhs10604.404-26F8	66.33
lung, embryo E15.CNhs11020.432-17C5	55.00
lung, embryo E16.CNhs10998.458-17B6	48.35
lung, embryo E17.CNhs10605.480-44A6	38.86
lung, embryo E18.CNhs10583.1287-20I6	28.33
lung, neonate N00.CNhs11224.640-42C6	36.49
lung, neonate N06.CNhs11212.683-20E5	46.66
lung, neonate N07.CNhs11111.715-19A3	40.53
lung, neonate N10.CNhs11219.750-23E6	36.67
lung, neonate N20.CNhs11109.822-18A4	35.56
lung, neonate N25.CNhs11119.1359-25C7	33.33
lung, neonate N30.CNhs11133.1394-42H2	30.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	33.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	51.67
mammary gland, adult lactating day02.CNhs10480.595-22B6	46.72
mammary gland, adult pregnant day19.CNhs10476.588-5H2	64.02
medulla oblongata, adult.CNhs10477.17-12C2	28.10
medulla oblongata, neonate N30.CNhs11200.1396-42A3	26.02
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	94.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	46.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	46.06
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	51.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	50.41
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	54.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	47.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	56.05
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	53.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	44.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	50.60
olfactory brain, adult.CNhs10489.18-22I9	35.99
ovary, adult.CNhs10507.91-2I7	55.50
ovary, embryo E18.CNhs11040.505-44H7	33.83
ovary, neonate N00.CNhs11217.1299-22I4	52.94
oviduct, adult pregnant day01.CNhs10500.988-6G6	50.65
pancreas, adult.CNhs10486.34-16E4	54.43
pancreas, embryo E14.CNhs11012.405-44F4	58.02
pancreas, embryo E15.CNhs11042.1556-45F2	52.91
pancreas, embryo E16.CNhs11003.460-26E5	55.83
pancreas, embryo E17.CNhs10599.1558-45G3	44.30
pancreas, embryo E18.CNhs10580.1535-43I7	55.95
pancreas, neonate N00.CNhs11105.645-26G9	78.30
pancreas, neonate N01.CNhs11138.1531-43D7	63.62
pancreas, neonate N02.CNhs11139.1539-43D8	63.81
pancreas, neonate N16.CNhs11136.787-43B6	88.81
pancreas, neonate N25.CNhs11094.1555-45E2	51.66
pancreas, neonate N30.CNhs11182.1548-44H5	46.41
pituitary gland, adult.CNhs10493.21-1G8	36.77
pituitary gland, embryo E12.CNhs11018.346-16E6	56.00
pituitary gland, embryo E13.CNhs11009.370-44C7	26.13
pituitary gland, embryo E14.CNhs11037.398-44A5	36.44
pituitary gland, embryo E15.CNhs10592.427-16B9	43.80
pituitary gland, embryo E16.CNhs11036.449-43F6	37.28
pituitary gland, embryo E17.CNhs11039.1265-44F5	38.67
pituitary gland, neonate N00.CNhs11190.1308-22E9	28.32
placenta, adult pregnant day10.CNhs10472.539-13I7	49.75
placenta, adult pregnant day17.CNhs10464.577-18G3	34.32
prostate, adult.CNhs10470.859-1F8	33.08
skin, adult.CNhs10492.30-1C3	71.56
skin, neonate N00.CNhs11124.650-25G4	63.46
skin, neonate N03.CNhs11215.662-22H3	65.68
skin, neonate N06.CNhs11097.693-20I5	56.34
skin, neonate N10.CNhs11108.762-6C4	70.58
small intestine, neonate N16.CNhs11114.790-21I1	35.85
spinal cord, adult.CNhs10505.24-13C9	28.18
spleen, adult.CNhs10465.25-2G2	61.51
spleen, embryo E16.CNhs11035.461-43C1	48.71
spleen, embryo E18.CNhs11011.1271-21F2	64.26
spleen, neonate N10.CNhs11116.752-24D1	54.25
spleen, neonate N20.CNhs11112.824-19H1	61.10
spleen, neonate N25.CNhs11099.1354-25G3	57.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	90.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	102.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	84.03
stomach, adult.CNhs10503.33-1H6	27.69
stomach, embryo E12.CNhs10588.356-43E3	67.70
stomach, embryo E15.CNhs10603.1252-16G8	60.59
stomach, embryo E16.CNhs11022.459-17D4	54.97
stomach, embryo E17.CNhs11006.1035-18D5	49.55
stomach, embryo E18.CNhs10999.1286-20C6	44.55
stomach, neonate N03.CNhs11193.1340-24B8	41.40
stomach, neonate N07.CNhs11210.718-18A9	44.63
stomach, neonate N25.CNhs11104.1355-25E4	34.03
stomach, neonate N30.CNhs11134.1386-42I1	28.77
submandibular gland, adult.CNhs10469.59-29C1	41.63
testis, adult.CNhs10504.57-7G5	22.55
testis, embryo E13.CNhs11031.389-23F5	53.38
testis, embryo E15.CNhs11034.443-27C5	45.00
testis, embryo E16.CNhs11033.470-26G5	44.72
testis, embryo E17.CNhs11029.486-18I5	42.75
testis, embryo E18.CNhs11027.503-18G5	46.13
testis, neonate N00.CNhs11189.1300-22B7	51.05
testis, neonate N07.CNhs11222.726-26I4	59.11
testis, neonate N10.CNhs11204.763-44D9	63.34
testis, neonate N20.CNhs11110.839-18H3	38.90
testis, neonate N30.CNhs11130.1391-42E2	28.80
thymus, adult.CNhs10471.38-12B5	66.99
thymus, embryo E14.CNhs11041.402-44I4	56.76
thymus, embryo E15.CNhs11005.430-45I2	67.17
thymus, embryo E16.CNhs11002.456-26C5	85.75
thymus, embryo E17.CNhs10581.478-18C1	73.58
thymus, embryo E18.CNhs10595.1273-19G4	61.59
thymus, neonate N02.CNhs11181.1541-43F8	65.87
thymus, neonate N03.CNhs11137.2104-43C7	78.28
thymus, neonate N06.CNhs11197.681-26C4	68.76
thymus, neonate N07.CNhs11211.713-19D3	70.57
thymus, neonate N10.CNhs11194.748-24E4	58.08
thymus, neonate N20.CNhs11186.820-7A2	60.91
thymus, neonate N25.CNhs11125.1362-25G7	62.83
thymus, neonate N30.CNhs11132.1393-42G2	57.85
tongue, adult.CNhs10499.32-1B4	49.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	142.07
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	190.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	127.93
urinary bladder, adult.CNhs10481.879-12E4	35.93
uterus, adult pregnant day19.CNhs10497.590-15F5	38.10
uterus, adult.CNhs10509.92-27E5	56.78
vagina, adult.CNhs10502.89-27D5	61.74
vesicular gland, adult.CNhs10491.51-27F8	43.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	31.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	34.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	32.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	33.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	28.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	33.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	29.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	26.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	32.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	25.37
whole body, embryo E11.CNhs11014.324-5I8	70.37
whole body, embryo E12.CNhs10587.857-27C9	70.23
whole body, embryo E13.CNhs10512.372-23H2	57.54
whole body, embryo E14.5.CNhs10578.420-27D2	57.13
whole body, embryo E14.CNhs10519.395-14B1	56.60
whole body, embryo E16.CNhs10514.453-14F2	48.90
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	53.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	49.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	53.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	48.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	45.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	49.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	47.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	48.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	48.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	55.22
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	55.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	55.56
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	51.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	51.82
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	43.77
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	49.23
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	45.51
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	49.93
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	56.71
whole body, embryo E17.5.CNhs10513.490-9F9	47.65
whole body, embryo E17.CNhs10517.475-3I5	31.48
whole body, embryo E18.CNhs10516.493-3B3	45.62
whole body, neonate N00.CNhs10525.657-19C2	48.56
whole body, neonate N01.CNhs10576.659-23C6	47.25
whole body, neonate N06.CNhs10515.692-21D1	35.07
whole body, neonate N10.CNhs10518.761-6B4	50.08

Click each plot point to find sample in table

Ontology-based sample term enrichment analysisSummary:This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space Analyst: Hideya Kawaji link to source dataset data

Cell type
Ontology term	p-value	n
hematopoietic cell	1.38e-11	32
hematopoietic oligopotent progenitor cell	1.38e-11	32
hematopoietic stem cell	1.38e-11	32
hematopoietic multipotent progenitor cell	1.38e-11	32
lymphoid lineage restricted progenitor cell	1.53e-08	12
lymphocyte	2.21e-08	13
common lymphoid progenitor	2.21e-08	13
hematopoietic lineage restricted progenitor cell	3.55e-08	25
T cell	5.86e-08	11
pro-T cell	5.86e-08	11
mature alpha-beta T cell	3.64e-07	9
alpha-beta T cell	3.64e-07	9
immature T cell	3.64e-07	9
mature T cell	3.64e-07	9
immature alpha-beta T cell	3.64e-07	9

Uber anatomy
Ontology term	p-value	n
hemopoietic organ	2.29e-09	29
immune organ	2.29e-09	29
segment of respiratory tract	4.71e-09	27
thymus	2.44e-08	23
neck	2.44e-08	23
respiratory system epithelium	2.44e-08	23
hemolymphoid system gland	2.44e-08	23
pharyngeal epithelium	2.44e-08	23
thymic region	2.44e-08	23
pharyngeal gland	2.44e-08	23
entire pharyngeal arch endoderm	2.44e-08	23
thymus primordium	2.44e-08	23
early pharyngeal endoderm	2.44e-08	23
pharynx	3.06e-08	24
upper respiratory tract	3.06e-08	24
chordate pharynx	3.06e-08	24
pharyngeal arch system	3.06e-08	24
pharyngeal region of foregut	3.06e-08	24
mixed endoderm/mesoderm-derived structure	4.94e-08	35
gland of gut	5.76e-08	24
hematopoietic system	7.01e-08	45
blood island	7.01e-08	45
hemolymphoid system	1.97e-07	48
immune system	1.97e-07	48
anterior region of body	5.46e-07	43

@@ Line 1: / Line 1: @@
 {{FFCP
-|id=chr17:71965559..71965599,+
+|DHSsupport=NA
-|short_description=p1@Wdr43
+|DPIdataset=NA
-|description=CAGE_peak_1_at_Wdr43_5end
-|association_with_transcript=4bp_to_ENSMUST00000047086,NM_175639_5end
 |EntrezGene=72515
 |HGNC=
+|MCL_coexpression_id=101
+|TSSclassifier=NA
 |UniProt=Q6ZQL4
+|association_with_transcript=4bp_to_ENSMUST00000047086,NM_175639_5end
+|cluster_id=chr17:71965559..71965599,+
+|description=CAGE_peak_1_at_Wdr43_5end
+|id=chr17:71965559..71965599,+
+|ontology_enrichment_celltype=CL:0000988!1.38e-11!32;CL:0002032!1.38e-11!32;CL:0000037!1.38e-11!32;CL:0000566!1.38e-11!32;CL:0000837!1.38e-11!32;CL:0000838!1.53e-08!12;CL:0000542!2.21e-08!13;CL:0000051!2.21e-08!13;CL:0002031!3.55e-08!25;CL:0000084!5.86e-08!11;CL:0000827!5.86e-08!11;CL:0000791!3.64e-07!9;CL:0000789!3.64e-07!9;CL:0002420!3.64e-07!9;CL:0002419!3.64e-07!9;CL:0000790!3.64e-07!9
+|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-11,32;CL:0002032,1.38e-11,32;CL:0000037,1.38e-11,32;CL:0000837,1.38e-11,32;CL:0000838,1.53e-08,12;CL:0000542,2.21e-08,13;CL:0000051,2.21e-08,13;CL:0002031,3.55e-08,25;CL:0000084,5.86e-08,11;CL:0000827,5.86e-08,11;CL:0000791,3.64e-07,9;CL:0000789,3.64e-07,9;CL:0002420,3.64e-07,9;CL:0002419,3.64e-07,9;CL:0000790,3.64e-07,9
+|ontology_enrichment_disease=
+|ontology_enrichment_disease_v019_2=
+|ontology_enrichment_uberon=UBERON:0004177!2.29e-09!29;UBERON:0000072!4.71e-09!27;UBERON:0002370!2.44e-08!23;UBERON:0000974!2.44e-08!23;UBERON:0004807!2.44e-08!23;UBERON:0005058!2.44e-08!23;UBERON:0003351!2.44e-08!23;UBERON:0009113!2.44e-08!23;UBERON:0003295!2.44e-08!23;UBERON:0009722!2.44e-08!23;UBERON:0005562!2.44e-08!23;UBERON:0007690!2.44e-08!23;UBERON:0006562!3.06e-08!24;UBERON:0001557!3.06e-08!24;UBERON:0001042!3.06e-08!24;UBERON:0008814!3.06e-08!24;UBERON:0009145!3.06e-08!24;UBERON:0003408!5.76e-08!24;UBERON:0002390!7.01e-08!45;UBERON:0003061!7.01e-08!45;UBERON:0001041!9.67e-08!92;UBERON:0005057!1.40e-07!51;UBERON:0002193!1.97e-07!48;UBERON:0000077!2.74e-07!97;UBERON:0002405!6.25e-07!70
+|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.29e-09,29;UBERON:0005057,2.29e-09,29;UBERON:0000072,4.71e-09,27;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0006562,3.06e-08,24;UBERON:0001557,3.06e-08,24;UBERON:0001042,3.06e-08,24;UBERON:0008814,3.06e-08,24;UBERON:0009145,3.06e-08,24;UBERON:0000077,4.94e-08,35;UBERON:0003408,5.76e-08,24;UBERON:0002390,7.01e-08,45;UBERON:0003061,7.01e-08,45;UBERON:0002193,1.97e-07,48;UBERON:0002405,1.97e-07,48;UBERON:0000153,5.46e-07,43
 |phase1_expression=39.7169140819889,7.32848356042658,8.64498554840118,8.46899791659124,7.51343594919521,46.3346790476816,50.226717728038,83.9301602370246,429.827968729039,484.279504960205,323.944395882655,338.154181981231,108.198861316522,101.320246403618,81.2787818830217,67.6267393082019,37.0767795407918,91.1685657885307,102.561596337093,78.9364752344336,21.941168858976,68.6100472798117,76.2703384285691,34.0783860549956,27.7585230091276,20.0981187440257,26.2764817657036,23.9173068281337,24.893067948785,26.2111334950328,31.7074630237086,128.911226712305,91.0295885625164,63.3926724061755,79.4341954316005,77.1328754463404,80.2385570111111,12.1374172913703,15.626706890476,17.7998072951091,7.05877785637217,7.5135003345429,11.1667381197165,43.6861958375253,45.8223729112206,51.5766373574325,10.9534788208725,11.3373081317832,5.71184075109627,15.3599620268684,10.7789544651529,7.18762821824858,95.3005202407943,97.9238891715315,111.583141315298,37.3026182252123,31.2321449533245,23.7209162447623,22.659443616275,17.4567023159771,16.4796164911607,14.5703148789727,6.22506357277798,8.54904731417329,9.88866362566974,9.9467216092454,6.89080254192331,7.68436610643109,31.4179525294687,22.0059679480656,30.0764694732476,13.139945282575,15.9025349485162,30.1327366068787,23.0029130443767,34.0110951045708,22.0231761998777,29.4957750976784,28.1099955858926,23.7395317914349,21.5910838901687,27.0874952689515,18.7052609330925,20.2594539611405,28.2676758387099,32.7037729875771,34.0268317109856,32.4335035736023,79.2095982265105,42.0933589794795,53.3350659211087,30.1148356943485,89.7562160494231,24.8263468153396,35.7377029596218,58.2434953226536,33.1448831510934,34.4269251607677,27.0177444786984,25.7937889392548,37.8868799199271,34.6481489018658,50.9610479413291,35.5533351576666,55.8546885808932,62.3265269068743,66.2237022969366,38.023231946447,114.709482455697,39.782493269373,54.4743926045667,48.7144765299426,37.1290950582254,31.1995865943929,42.8022893973965,31.7936476064079,32.382540773203,43.5244064328934,37.1536431818947,52.2506925330132,46.8184019136034,51.3967768323335,33.550517019262,34.255353250351,33.9303665037797,33.7203312875341,112.865847284577,92.9849233039782,91.6176337196796,28.1606402081067,33.8550446085784,46.6177646338727,29.3763101124947,29.9187085076487,24.3112012134685,33.0972176658226,53.5675053852664,41.427521213161,38.9193047987859,37.4586503477924,53.3493816147085,48.9691482443297,49.8772099560817,43.4029875366859,49.9387903770746,43.6867786171338,43.0090915729155,36.9945820156792,53.8919982332106,63.5396429363873,58.9436265949229,51.7301928529077,55.0533553466684,60.2476248083348,50.828187692762,65.6813080501028,120.780668217876,104.740598195689,92.3531373035676,53.645575086695,49.2504725960302,43.0348326891826,43.0875418765083,37.1884398002593,39.8009151249436,39.9958384970702,34.0707219777516,43.7870033876886,40.1526033788892,36.9376794177964,36.1566890574517,33.1873971455504,40.1776710982623,33.0147790150515,32.3846520788756,46.7186940201951,10.9038198384653,43.8987940661483,52.2556213811323,62.2394280585975,68.2997545007095,55.0596022221725,40.2504259359215,38.8060277269621,33.6915633696603,36.8925658581784,37.9516165288407,36.8069473276129,38.7978533367049,40.44687338944,26.8011181844621,31.46432117419,36.2265690820386,67.8636164901789,69.8787961173099,55.8004638296161,45.9667394587273,57.4412364901709,37.8786857374301,29.8172498918796,28.887765922813,24.8028299482819,45.6537045714209,91.7648081438517,86.4859578498093,74.2044970870017,63.9009382373784,52.3354436662745,43.7956465064042,49.4837356415394,65.0162259367892,39.8114049122718,41.6927798929328,35.3533900285078,37.1324831006327,38.8971472038552,33.1885215015538,35.7008205808892,36.2116252726545,60.2582689430142,66.3267454119045,54.997407791161,48.3461911474314,38.8614517265013,28.3271932654356,36.4899921494084,46.6600026554325,40.5280382057258,36.674596791222,35.5583392933151,33.3282015001178,30.3763023021174,33.1740824666399,51.6710399627774,46.7176059368084,64.0173251426979,28.0963532478636,26.0209944234691,94.4265285369651,46.9595924600134,46.0642000347735,51.1474755028596,50.409075069475,54.962823529087,47.0105202313852,56.0491530961888,53.0302019194112,44.7151462604307,50.596835577155,35.9879874392424,55.498573316433,33.8324646967785,52.9382617899122,50.6458277525684,54.4255067193848,58.0245720410406,52.9066224688314,55.8271036077458,44.2952839321159,55.9531969257948,78.303772829971,63.6184026585635,63.8130307308651,88.8063289799643,51.6551182017494,46.4109944616841,36.7674774214091,55.9990002437375,26.1304541241164,36.4372959553707,43.8030377096416,37.2790828788327,38.6690198414984,28.3152402676577,49.7504021095066,34.3167954799389,33.0792597082443,71.5606337766023,63.4555196914909,65.6807752467617,56.3437463694804,70.5805868903763,35.8521429054716,28.1846459055975,61.513517087227,48.7073008393205,64.2625009972899,54.250115617351,61.1023197912982,57.1945433016307,90.2585463267372,102.864317457889,84.0255840730897,27.6854479224383,67.695902626363,60.5892012038009,54.9747184782968,49.5539261554291,44.5459630042202,41.40335434014,44.6328660916814,34.0282724579238,28.774524070778,41.629733976824,22.5477175473676,53.3774069377004,45.0047094043306,44.723773319131,42.751901571129,46.1250222589824,51.050398810903,59.1127907191533,63.3350440331293,38.895043452987,28.8030006257865,66.9943575731738,56.763060281246,67.172965985797,85.7477431653447,73.5799719193349,61.5912199821921,65.8671063369429,78.2754494025259,68.7581524146885,70.5675029625299,58.0758826388201,60.9111754623453,62.8263325911351,57.8540665798766,49.8806843953465,142.071010159401,190.283089868698,127.928077669428,35.9332644899874,38.0995425165899,56.7770035228522,61.738093174771,43.1352009470412,31.0613513439387,34.0640675015311,32.6550442660456,32.995811009988,28.0883833105963,33.9927253825365,29.0259675099676,26.1186297870048,32.6262534468627,25.3702552758392,70.3678216620718,70.2283777185815,57.5372251391432,57.1300785110491,56.5955539095552,48.9023732477038,53.116967944586,49.8604838518124,54.2353464210168,53.3191116821613,55.7654459758527,51.1177385156267,48.599942376869,45.7779839694815,49.3945033018274,47.6293691283074,48.5555325708944,48.6131235568537,55.2195107076431,54.7579982899958,55.5448188864373,53.7751692662793,55.5556322577258,50.871245821315,53.0776905542465,58.3840794452568,51.5856883501219,51.824733153255,52.9636043998861,43.7690971893036,49.2335325215323,45.5090708575103,49.9261872667021,56.7068838740635,47.6479329123419,31.4761328201812,45.6166636468546,48.5608582149154,47.2482180210043,35.074035640003,50.083452494011
+|short_description=p1@Wdr43
 }}

Personal tools

FFCP PHASE1:Mm9::chr17:71965559..71965599,+: Difference between revisions - resource_browser

Search

Human

Mouse

Rat

Dog

Chicken

Macaque

Cross species

Other

Tools

FFCP PHASE1:Mm9::chr17:71965559..71965599,+: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 20:42, 26 September 2015

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0