FFCP PHASE1:Mm9::chr15:39029790..39029813,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39029790..39029813,+
|short_description=p6@Rims2
|description=CAGE_peak_6_at_Rims2_5end
|association_with_transcript=-64bp_to_ENSMUST00000082054,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=116838 | |EntrezGene=116838 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81 | |UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81 | ||
|association_with_transcript=-64bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end | |||
|cluster_id=chr15:39029790..39029813,+ | |||
|description=CAGE_peak_6_at_Rims2_5end | |||
|id=chr15:39029790..39029813,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.89e-14!33;CL:0000047!3.89e-14!33;CL:0000031!3.89e-14!33;CL:0000404!3.89e-14!33;CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000221!4.51e-11!44;CL:0000133!4.51e-11!44;CL:0002319!1.79e-10!43;CL:0000393!8.83e-10!39;CL:0000211!8.83e-10!39;CL:0000055!4.41e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-15,23;CL:0000337,1.14e-15,23;CL:0000540,4.99e-12,33;CL:0000047,4.99e-12,33;CL:0000031,4.99e-12,33;CL:0000404,4.99e-12,33;CL:0000393,2.61e-09,39;CL:0000211,2.61e-09,39;CL:0000221,9.77e-09,44;CL:0000133,9.77e-09,44;CL:0002319,6.10e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.94e-30!71;UBERON:0003075!2.94e-30!71;UBERON:0007284!2.94e-30!71;UBERON:0004121!4.39e-28!102;UBERON:0000924!4.39e-28!102;UBERON:0006601!4.39e-28!102;UBERON:0000033!1.16e-26!63;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0000073!5.05e-26!75;UBERON:0001016!5.05e-26!75;UBERON:0003056!3.09e-23!49;UBERON:0001049!2.51e-22!52;UBERON:0005068!2.51e-22!52;UBERON:0006241!2.51e-22!52;UBERON:0007135!2.51e-22!52;UBERON:0000955!4.26e-21!50;UBERON:0006238!4.26e-21!50;UBERON:0002616!2.80e-20!49;UBERON:0003080!1.07e-17!40;UBERON:0002780!4.57e-17!39;UBERON:0001890!4.57e-17!39;UBERON:0006240!4.57e-17!39;UBERON:0002020!7.83e-15!34;UBERON:0007811!1.71e-13!86;UBERON:0002791!5.47e-12!29;UBERON:0003528!5.47e-12!29;UBERON:0001893!5.47e-12!29;UBERON:0000153!8.14e-11!94;UBERON:0000956!8.47e-08!21;UBERON:0001869!8.47e-08!21;UBERON:0000203!8.47e-08!21;UBERON:0000020!8.15e-07!12;UBERON:0001032!8.15e-07!12;UBERON:0004456!8.15e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.60e-36,64;UBERON:0003075,2.60e-36,64;UBERON:0007284,2.60e-36,64;UBERON:0010371,4.65e-34,73;UBERON:0004121,5.52e-33,95;UBERON:0000924,5.52e-33,95;UBERON:0006601,5.52e-33,95;UBERON:0003056,8.31e-33,49;UBERON:0000073,9.87e-32,54;UBERON:0001049,7.60e-30,52;UBERON:0005068,7.60e-30,52;UBERON:0006241,7.60e-30,52;UBERON:0007135,7.60e-30,52;UBERON:0001017,8.03e-30,73;UBERON:0001016,1.15e-28,75;UBERON:0000955,2.34e-26,47;UBERON:0006238,2.34e-26,47;UBERON:0010314,2.33e-25,92;UBERON:0002616,5.54e-25,46;UBERON:0003080,3.15e-24,40;UBERON:0002780,4.05e-23,39;UBERON:0001890,4.05e-23,39;UBERON:0006240,4.05e-23,39;UBERON:0002020,1.28e-19,34;UBERON:0003528,5.65e-16,29;UBERON:0002791,5.65e-16,29;UBERON:0001893,5.65e-16,29;UBERON:0000020,9.63e-11,12;UBERON:0001032,9.63e-11,12;UBERON:0004456,9.63e-11,12;UBERON:0000956,7.15e-10,21;UBERON:0001869,7.15e-10,21;UBERON:0000203,7.15e-10,21;UBERON:0000033,1.03e-09,13;UBERON:0005085,1.03e-09,13;UBERON:0002619,1.57e-09,17;UBERON:0000970,2.94e-09,9;UBERON:0000019,2.94e-09,9;UBERON:0000047,2.94e-09,9;UBERON:0010312,2.94e-09,9;UBERON:0004088,2.94e-09,9;UBERON:0002104,2.94e-09,9;UBERON:0001456,2.94e-09,9;UBERON:0003072,2.94e-09,9;UBERON:0004128,2.94e-09,9;UBERON:0003071,2.94e-09,9;UBERON:0004111,1.15e-08,122;UBERON:0000025,2.37e-08,114;UBERON:0001894,4.12e-08,10;UBERON:0006222,4.12e-08,10;UBERON:0002021,5.09e-08,10;UBERON:0000411,5.09e-08,10;UBERON:0001950,5.09e-08,10;UBERON:0002420,1.06e-07,8;UBERON:0007245,1.06e-07,8;UBERON:0010009,1.06e-07,8;UBERON:0010011,1.06e-07,8;UBERON:0000454,1.06e-07,8;UBERON:0000369,1.19e-07,5;UBERON:0002435,1.19e-07,5;UBERON:0000204,1.19e-07,5;UBERON:0010082,1.19e-07,5;UBERON:0000483,1.30e-07,174;UBERON:0000119,2.21e-07,176;UBERON:0001444,2.99e-07,11 | |||
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| ||
|short_description=p6@Rims2 | |||
}} | }} |
Latest revision as of 18:43, 26 September 2015
Short description: | p6@Rims2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rims2_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENSMUST00000082054, ENSMUST00000110312, ENSMUST00000167407, NM_053271, uc007vod.1, uc007voe.1, uc011zsk.1_5end |
EntrezGene: | Rims2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-15 | 23 |
neuron | 4.99e-12 | 33 |
neuronal stem cell | 4.99e-12 | 33 |
neuroblast | 4.99e-12 | 33 |
electrically signaling cell | 4.99e-12 | 33 |
electrically responsive cell | 2.61e-09 | 39 |
electrically active cell | 2.61e-09 | 39 |
ectodermal cell | 9.77e-09 | 44 |
neurectodermal cell | 9.77e-09 | 44 |
neural cell | 6.10e-08 | 43 |