FFCP PHASE1:Mm9::chr14:54852225..54852239,+: Difference between revisions
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|id=chr14:54852225..54852239,+
|short_description=p@chr14:54852225..54852239,+
|description=CAGE_peak_at_chr14:54852225..54852239,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:54852225..54852239,+ | |||
|description=CAGE_peak_at_chr14:54852225..54852239,+ | |||
|id=chr14:54852225..54852239,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.44e-16!9;CL:0002251!3.44e-16!9;CL:0000239!1.93e-14!6;CL:0000677!1.93e-14!6;CL:0000212!1.93e-14!6;CL:0000584!1.93e-14!6;CL:0000075!3.00e-12!7;CL:0002076!2.15e-11!15;CL:0000066!2.35e-11!25;CL:0000473!4.28e-08!3;CL:0000627!4.28e-08!3;CL:0000682!4.28e-08!3;CL:0000223!4.51e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.57e-33,6;CL:0000677,2.57e-33,6;CL:0000584,2.57e-33,6;CL:0002563,8.61e-30,9;CL:0002251,8.61e-30,9;CL:0000075,1.58e-28,7;CL:0000066,3.24e-21,25;CL:0002076,1.15e-17,15;CL:0000682,1.21e-17,3;CL:0000223,4.22e-13,20;CL:0000473,7.22e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.23e-28!15;UBERON:0001242!3.89e-24!13;UBERON:0000060!3.89e-24!13;UBERON:0001262!3.89e-24!13;UBERON:0004786!3.89e-24!13;UBERON:0000160!1.56e-16!43;UBERON:0004923!1.56e-16!24;UBERON:0003350!3.44e-16!9;UBERON:0004808!3.44e-16!9;UBERON:0001277!3.44e-16!9;UBERON:0000485!5.96e-13!11;UBERON:0005409!6.86e-12!59;UBERON:0001007!6.77e-08!128;UBERON:0001555!6.77e-08!128;UBERON:0007026!6.77e-08!128;UBERON:0004119!1.14e-07!130;UBERON:0000925!1.14e-07!130;UBERON:0006595!1.14e-07!130;UBERON:0000331!1.39e-07!3;UBERON:0002116!1.39e-07!3;UBERON:0001204!1.39e-07!3;UBERON:0001168!1.39e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.84e-51,15;UBERON:0001242,7.42e-41,13;UBERON:0001262,7.42e-41,13;UBERON:0004786,7.42e-41,13;UBERON:0004923,1.17e-31,24;UBERON:0003350,8.61e-30,9;UBERON:0004808,8.61e-30,9;UBERON:0001277,8.61e-30,9;UBERON:0000485,2.76e-24,11;UBERON:0000160,5.63e-20,31;UBERON:0000331,2.19e-16,3;UBERON:0002116,2.19e-16,3;UBERON:0001204,2.19e-16,3;UBERON:0001168,2.19e-16,3;UBERON:0005409,1.06e-12,47;UBERON:0001962,1.37e-12,2;UBERON:0001961,1.37e-12,2;UBERON:0001744,1.37e-12,2;UBERON:0002108,1.91e-12,4;UBERON:0002465,1.10e-08,3;UBERON:0003199,2.75e-07,1 | |||
|phase1_expression=0,3.48975407639361,2.27499619694768,6.35174843744343,5.00895729946347,1.51091344720701,2.56973904655078,0,0.281577444303333,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,3.19984845586813,7.34109699414944,2.29692785646008,3.4460959692726,3.878482188346,1.52018735565099,1.76421090831952,1.99557459589774,0,0,0,0.866554859253824,0,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0,0,0,0,0.951128130562796,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,3.48975407639361,2.27499619694768,6.35174843744343,5.00895729946347,1.51091344720701,2.56973904655078,0,0.281577444303333,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,3.19984845586813,7.34109699414944,2.29692785646008,3.4460959692726,3.878482188346,1.52018735565099,1.76421090831952,1.99557459589774,0,0,0,0.866554859253824,0,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0,0,0,0,0.951128130562796,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr14:54852225..54852239,+ | |||
}} | }} |
Latest revision as of 10:56, 4 August 2015
Short description: | p@chr14:54852225..54852239, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54852225..54852239, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.57e-33 | 6 |
gut absorptive cell | 2.57e-33 | 6 |
enterocyte | 2.57e-33 | 6 |
intestinal epithelial cell | 8.61e-30 | 9 |
epithelial cell of alimentary canal | 8.61e-30 | 9 |
columnar/cuboidal epithelial cell | 1.58e-28 | 7 |
epithelial cell | 3.24e-21 | 25 |
endo-epithelial cell | 1.15e-17 | 15 |
M cell of gut | 1.21e-17 | 3 |
endodermal cell | 4.22e-13 | 20 |
defensive cell | 7.22e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.84e-51 | 15 |
intestinal mucosa | 7.42e-41 | 13 |
wall of intestine | 7.42e-41 | 13 |
gastrointestinal system mucosa | 7.42e-41 | 13 |
organ component layer | 1.17e-31 | 24 |
epithelium of mucosa | 8.61e-30 | 9 |
gastrointestinal system epithelium | 8.61e-30 | 9 |
intestinal epithelium | 8.61e-30 | 9 |
simple columnar epithelium | 2.76e-24 | 11 |
intestine | 5.63e-20 | 31 |
ileal mucosa | 2.19e-16 | 3 |
ileum | 2.19e-16 | 3 |
mucosa of small intestine | 2.19e-16 | 3 |
wall of small intestine | 2.19e-16 | 3 |
gastrointestinal system | 1.06e-12 | 47 |
gut-associated lymphoid tissue | 1.37e-12 | 2 |
mucosa-associated lymphoid tissue | 1.37e-12 | 2 |
lymphoid tissue | 1.37e-12 | 2 |
small intestine | 1.91e-12 | 4 |
lymphoid system | 1.10e-08 | 3 |
egg chamber | 2.75e-07 | 1 |