FFCP PHASE1:Mm9::chr14:33413108..33413118,+: Difference between revisions
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|id=chr14:33413108..33413118,+
|short_description=p3@Prrxl1
|description=CAGE_peak_3_at_Prrxl1_5end
|association_with_transcript=0bp_to_ENSMUST00000068938,NM_001001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107751 | |EntrezGene=107751 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BYH0 | |UniProt=Q8BYH0 | ||
|association_with_transcript=0bp_to_ENSMUST00000068938,NM_001001796,uc007szf.1_5end | |||
|cluster_id=chr14:33413108..33413118,+ | |||
|description=CAGE_peak_3_at_Prrxl1_5end | |||
|id=chr14:33413108..33413118,+ | |||
|ontology_enrichment_celltype=CL:0002612!2.39e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.10e-52,3;CL:0002611,2.13e-35,2;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!6.11e-15!6;UBERON:0005174!6.11e-15!6;UBERON:0001137!6.11e-15!6;UBERON:0001948!8.55e-13!5;UBERON:0002315!8.55e-13!5;UBERON:0003076!1.23e-11!12;UBERON:0003057!1.23e-11!12;UBERON:0002257!2.39e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.40e-86,5;UBERON:0002315,1.40e-86,5;UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0002257,1.10e-52,3;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,2.13e-35,2;UBERON:0000489,2.63e-21,21;UBERON:0002020,1.96e-13,34;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,1.13897344639282,4.47358669980721,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.37456602987953,0.320125762024346,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,2.42955395046775,0,0,0,0,0,0,0,0,0,0,0,0,2.65165726926301,1.13897344639282,4.47358669980721,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.37456602987953,0.320125762024346,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0,0 | ||
|short_description=p3@Prrxl1 | |||
}} | }} |
Latest revision as of 21:55, 25 September 2015
Short description: | p3@Prrxl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prrxl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | 0bp_to_ENSMUST00000068938, NM_001001796, uc007szf.1_5end |
EntrezGene: | Prrxl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.10e-52 | 3 |
neuron of the dorsal spinal cord | 2.13e-35 | 2 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.40e-86 | 5 |
gray matter of spinal cord | 1.40e-86 | 5 |
spinal cord | 2.48e-72 | 6 |
dorsal region element | 2.48e-72 | 6 |
dorsum | 2.48e-72 | 6 |
ventral horn of spinal cord | 1.10e-52 | 3 |
posterior neural tube | 1.18e-36 | 12 |
chordal neural plate | 1.18e-36 | 12 |
dorsal horn of spinal cord | 2.13e-35 | 2 |
cavitated compound organ | 2.63e-21 | 21 |
gray matter | 1.96e-13 | 34 |
compound organ | 9.33e-11 | 43 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |