FFCP PHASE1:Mm9::chr12:81861669..81861717,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:81861669..81861717,-
|short_description=p1@Gm1568
|description=CAGE_peak_1_at_Gm1568_5end
|association_with_transcript=0bp_to_NM_001008423,uc007obh.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=380768 | |EntrezGene=380768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHB8,Q6NXJ5 | |UniProt=Q3UHB8,Q6NXJ5 | ||
|association_with_transcript=0bp_to_NM_001008423,uc007obh.2_5end | |||
|cluster_id=chr12:81861669..81861717,- | |||
|description=CAGE_peak_1_at_Gm1568_5end | |||
|id=chr12:81861669..81861717,- | |||
|ontology_enrichment_celltype=CL:0000117!1.70e-20!23;CL:0000337!1.70e-20!23;CL:0000540!9.21e-20!33;CL:0000047!9.21e-20!33;CL:0000031!9.21e-20!33;CL:0000404!9.21e-20!33;CL:0000221!1.35e-18!44;CL:0000133!1.35e-18!44;CL:0002319!1.82e-18!43;CL:0000393!1.00e-14!39;CL:0000211!1.00e-14!39;CL:0000055!7.46e-14!50;CL:0002609!6.73e-07!6;CL:0002321!9.94e-07!70;CL:0000220!9.94e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.47e-27,23;CL:0000337,8.47e-27,23;CL:0000540,3.84e-20,33;CL:0000047,3.84e-20,33;CL:0000031,3.84e-20,33;CL:0000404,3.84e-20,33;CL:0002319,7.21e-17,43;CL:0000221,2.92e-16,44;CL:0000133,2.92e-16,44;CL:0000393,1.25e-15,39;CL:0000211,1.25e-15,39;CL:0002609,1.12e-08,6;CL:0002321,6.95e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.06e-39!73;UBERON:0005743!3.06e-39!73;UBERON:0000073!1.87e-37!75;UBERON:0001016!1.87e-37!75;UBERON:0000033!9.43e-34!63;UBERON:0002346!2.55e-32!71;UBERON:0003075!2.55e-32!71;UBERON:0007284!2.55e-32!71;UBERON:0004121!6.93e-32!102;UBERON:0000924!6.93e-32!102;UBERON:0006601!6.93e-32!102;UBERON:0001049!1.19e-31!52;UBERON:0005068!1.19e-31!52;UBERON:0006241!1.19e-31!52;UBERON:0007135!1.19e-31!52;UBERON:0000955!1.96e-30!50;UBERON:0006238!1.96e-30!50;UBERON:0003056!4.23e-30!49;UBERON:0002616!1.17e-29!49;UBERON:0002020!1.15e-25!34;UBERON:0003080!2.60e-24!40;UBERON:0002780!1.73e-23!39;UBERON:0001890!1.73e-23!39;UBERON:0006240!1.73e-23!39;UBERON:0002791!6.20e-22!29;UBERON:0003528!6.20e-22!29;UBERON:0001893!6.20e-22!29;UBERON:0007811!3.35e-19!86;UBERON:0000153!5.78e-17!94;UBERON:0000956!2.96e-15!21;UBERON:0001869!2.96e-15!21;UBERON:0000203!2.96e-15!21;UBERON:0002619!5.85e-12!17;UBERON:0002420!7.50e-08!8;UBERON:0007245!7.50e-08!8;UBERON:0010009!7.50e-08!8;UBERON:0010011!7.50e-08!8;UBERON:0000454!7.50e-08!8;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12;UBERON:0002021!3.88e-07!10;UBERON:0000411!3.88e-07!10;UBERON:0001950!3.88e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.70e-40,64;UBERON:0003075,5.70e-40,64;UBERON:0007284,5.70e-40,64;UBERON:0001017,5.23e-36,73;UBERON:0000073,7.40e-36,54;UBERON:0004121,1.76e-35,95;UBERON:0000924,1.76e-35,95;UBERON:0006601,1.76e-35,95;UBERON:0001016,1.43e-34,75;UBERON:0001049,2.57e-33,52;UBERON:0005068,2.57e-33,52;UBERON:0006241,2.57e-33,52;UBERON:0007135,2.57e-33,52;UBERON:0010371,6.93e-33,73;UBERON:0003056,4.62e-31,49;UBERON:0002020,1.14e-30,34;UBERON:0000955,2.01e-28,47;UBERON:0006238,2.01e-28,47;UBERON:0002616,1.83e-27,46;UBERON:0003528,9.84e-26,29;UBERON:0002791,9.84e-26,29;UBERON:0001893,9.84e-26,29;UBERON:0003080,1.17e-23,40;UBERON:0002780,1.23e-22,39;UBERON:0001890,1.23e-22,39;UBERON:0006240,1.23e-22,39;UBERON:0010314,1.47e-22,92;UBERON:0000956,5.44e-17,21;UBERON:0001869,5.44e-17,21;UBERON:0000203,5.44e-17,21;UBERON:0002619,9.97e-13,17;UBERON:0002420,6.08e-10,8;UBERON:0007245,6.08e-10,8;UBERON:0010009,6.08e-10,8;UBERON:0010011,6.08e-10,8;UBERON:0000454,6.08e-10,8;UBERON:0003076,6.60e-10,12;UBERON:0003057,6.60e-10,12;UBERON:0000970,4.90e-08,9;UBERON:0000019,4.90e-08,9;UBERON:0000047,4.90e-08,9;UBERON:0010312,4.90e-08,9;UBERON:0004088,4.90e-08,9;UBERON:0002104,4.90e-08,9;UBERON:0001456,4.90e-08,9;UBERON:0003072,4.90e-08,9;UBERON:0004128,4.90e-08,9;UBERON:0003071,4.90e-08,9;UBERON:0002021,7.87e-08,10;UBERON:0000411,7.87e-08,10;UBERON:0001950,7.87e-08,10;UBERON:0000025,8.30e-08,114;UBERON:0000369,4.42e-07,5;UBERON:0002435,4.42e-07,5;UBERON:0000204,4.42e-07,5;UBERON:0010082,4.42e-07,5;UBERON:0002240,9.35e-07,6;UBERON:0005174,9.35e-07,6;UBERON:0001137,9.35e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,2.19686182734472,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,18.4107979382234,16.398720357433,16.4796164911607,0,0,0,0,0,0.599200221036809,2.68952813725088,16.4866483570479,16.2007125998029,18.9292465216244,3.42781181284564,5.30084498283872,15.0663683034393,16.1978846020819,19.3035945188104,13.2139057199266,6.12899222808901,6.29786786350598,17.9365351313064,16.6507511356386,25.5247551572812,4.4669279840221,7.31591393041184,6.57032465440283,5.00868595305235,5.83723891276322,7.82877672466262,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,7.74952815209784,0,0,0,0,6.29120685500255,3.66000482254901,8.92145900001337,3.47648640384553,4.60287823194595,6.02585329222724,4.2182728397617,0,0,0,5.26104639716185,2.34216797332867,1.60931473103431,1.80062129805349,2.41127708537144,3.06164246180975,2.69038812598185,3.65436725782942,7.76110112217047,0.215567992932842,0.567318240503458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,5.46753866266731,7.82075054082562,0.330418782983798,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,5.50894926983355,0.655739781506702,0,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,2.37172666767914,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,1.29358683782755,0.857348140126369,0.177340233642274,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,5.06357760157895,6.87474616127276,2.749650917499,1.37016503954128,4.5323633843382,6.07520250208625,4.5032120322422,4.07828168085784,0.51776031175182,3.42498247027783,0.798049746802062,2.39027048055788,1.45864030240976,1.25767897576789,0.919217542250071,0.888986911206461,2.06035057238894,1.60459604795908,1.26348605881899,2.02783439912192,1.13175804831646,1.31098110457835,0.640251524048693,1.32101578597911,1.90517476513229,0.811190281613988,1.35036454324594,1.23625770240992,0.883193520806384,1.02860775715625,1.59728225543404,0.715308569841963,1.0174249164263,0.564656282491984,0.930760686808441,1.09756783723664,0.526139422875686,1.22223702461276,2.24456908663095,1.54225523561426,0.886540341380071,2.04615521584845,1.70430525304563,0.964533054905707,3.74715866906919,1.40358965067245,0.859484216193193,0.765153328275374,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,2.19686182734472,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,18.4107979382234,16.398720357433,16.4796164911607,0,0,0,0,0,0.599200221036809,2.68952813725088,16.4866483570479,16.2007125998029,18.9292465216244,3.42781181284564,5.30084498283872,15.0663683034393,16.1978846020819,19.3035945188104,13.2139057199266,6.12899222808901,6.29786786350598,17.9365351313064,16.6507511356386,25.5247551572812,4.4669279840221,7.31591393041184,6.57032465440283,5.00868595305235,5.83723891276322,7.82877672466262,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44117753425404,7.74952815209784,0,0,0,0,6.29120685500255,3.66000482254901,8.92145900001337,3.47648640384553,4.60287823194595,6.02585329222724,4.2182728397617,0,0,0,5.26104639716185,2.34216797332867,1.60931473103431,1.80062129805349,2.41127708537144,3.06164246180975,2.69038812598185,3.65436725782942,7.76110112217047,0.215567992932842,0.567318240503458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,5.46753866266731,7.82075054082562,0.330418782983798,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,5.50894926983355,0.655739781506702,0,0.315508219416257,0.780877488593277,1.07711698866399,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,2.37172666767914,5.14114106274891,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,1.29358683782755,0.857348140126369,0.177340233642274,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,5.06357760157895,6.87474616127276,2.749650917499,1.37016503954128,4.5323633843382,6.07520250208625,4.5032120322422,4.07828168085784,0.51776031175182,3.42498247027783,0.798049746802062,2.39027048055788,1.45864030240976,1.25767897576789,0.919217542250071,0.888986911206461,2.06035057238894,1.60459604795908,1.26348605881899,2.02783439912192,1.13175804831646,1.31098110457835,0.640251524048693,1.32101578597911,1.90517476513229,0.811190281613988,1.35036454324594,1.23625770240992,0.883193520806384,1.02860775715625,1.59728225543404,0.715308569841963,1.0174249164263,0.564656282491984,0.930760686808441,1.09756783723664,0.526139422875686,1.22223702461276,2.24456908663095,1.54225523561426,0.886540341380071,2.04615521584845,1.70430525304563,0.964533054905707,3.74715866906919,1.40358965067245,0.859484216193193,0.765153328275374,0,0 | ||
|short_description=p1@Gm1568 | |||
}} | }} |
Latest revision as of 21:04, 26 September 2015
Short description: | p1@Gm1568 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1568_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NM_001008423, uc007obh.2_5end |
EntrezGene: | Gm1568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.47e-27 | 23 |
neuroblast (sensu Vertebrata) | 8.47e-27 | 23 |
neuron | 3.84e-20 | 33 |
neuronal stem cell | 3.84e-20 | 33 |
neuroblast | 3.84e-20 | 33 |
electrically signaling cell | 3.84e-20 | 33 |
neural cell | 7.21e-17 | 43 |
ectodermal cell | 2.92e-16 | 44 |
neurectodermal cell | 2.92e-16 | 44 |
electrically responsive cell | 1.25e-15 | 39 |
electrically active cell | 1.25e-15 | 39 |
neuron of cerebral cortex | 1.12e-08 | 6 |
embryonic cell | 6.95e-07 | 70 |