FFCP PHASE1:Mm9::chr12:120476799..120476810,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:120476799..120476810,-
|short_description=p12@Itgb8
|description=CAGE_peak_12_at_Itgb8_5end
|association_with_transcript=-50bp_to_NM_177290,uc007pik.1,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320910 | |EntrezGene=320910 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1616 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VBD0 | |UniProt=Q0VBD0 | ||
|association_with_transcript=-50bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end | |||
|cluster_id=chr12:120476799..120476810,- | |||
|description=CAGE_peak_12_at_Itgb8_5end | |||
|id=chr12:120476799..120476810,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.86e-16!63;UBERON:0004121!1.11e-15!102;UBERON:0000924!1.11e-15!102;UBERON:0006601!1.11e-15!102;UBERON:0002346!1.84e-14!71;UBERON:0003075!1.84e-14!71;UBERON:0007284!1.84e-14!71;UBERON:0003056!1.52e-13!49;UBERON:0001049!5.02e-13!52;UBERON:0005068!5.02e-13!52;UBERON:0006241!5.02e-13!52;UBERON:0007135!5.02e-13!52;UBERON:0000955!8.39e-13!50;UBERON:0006238!8.39e-13!50;UBERON:0002616!2.75e-12!49;UBERON:0000073!7.65e-11!75;UBERON:0001016!7.65e-11!75;UBERON:0001017!1.66e-10!73;UBERON:0005743!1.66e-10!73;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.43e-09!39;UBERON:0001890!3.43e-09!39;UBERON:0006240!3.43e-09!39;UBERON:0000153!9.21e-09!94;UBERON:0007811!3.66e-08!86;UBERON:0002020!1.89e-07!34;UBERON:0002791!3.47e-07!29;UBERON:0003528!3.47e-07!29;UBERON:0001893!3.47e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.97e-12,2;UBERON:0002298,2.97e-12,2;UBERON:0005290,2.97e-12,2;UBERON:0010096,2.97e-12,2;UBERON:0004733,5.45e-09,6;UBERON:0004732,5.45e-09,6;UBERON:0002028,5.45e-09,6;UBERON:0007277,5.45e-09,6;UBERON:0002346,5.51e-09,64;UBERON:0003075,5.51e-09,64;UBERON:0007284,5.51e-09,64;UBERON:0003076,9.79e-08,12;UBERON:0003057,9.79e-08,12;UBERON:0010371,1.08e-07,73;UBERON:0001049,1.50e-07,52;UBERON:0005068,1.50e-07,52;UBERON:0006241,1.50e-07,52;UBERON:0007135,1.50e-07,52;UBERON:0002616,8.12e-07,46;UBERON:0002113,8.13e-07,14;UBERON:0003918,8.13e-07,14;UBERON:0011143,8.13e-07,14;UBERON:0005095,8.13e-07,14;UBERON:0007687,8.13e-07,14;UBERON:0000489,9.22e-07,21 | |||
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| |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.503637815735669,0.467225281191051,0.516493293766305,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0.573066879877513,0,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0,0.210324961351382,0.571301968807607,0.441737081903227,0.244981598429908,0.191690942036473,0,0,0.766124028511126,0.307213066512487,0.527545150920775,0.182975287204819,0,0.837548997004143,0.56276261003168,1.37518422999129,0,0.142371680799103,0.186399445825301,0.075726193333184,0.453429360640713,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,0.748953197024114,0.915001205637253,0.376963056338593,0.347648640384553,0.767146371990992,0.83115217823824,0.973447578406546,0.203678727700633,0.124406970610093,0.252722758433675,0.631325567659422,1.56144531555244,0.229902104433473,0.540186389416048,0.30140963567143,0.612328492361951,0.384341160854549,0.468508622798644,1.03481348295606,0.646703978798527,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0.621377317606506,0,0.720248245844059,0.23674473558521,0.393528463494808,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.630869845692382,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.581857461502877,0.701358198903186,1.3279672796094,6.05201606716369,4.23896565171712,4.07210640941942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0.491764273019036,0.551873492609465,1.44495530989013,2.34423373184406,0.163934945376675,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0,0.178065603667255,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0.532020700926821,0.356737635204141,0.822745103010605,0,0,0,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,1.05621514781179,0.5208175393758,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,1.6942555278512,2.30162618253588,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0,0,0.355905054372522,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p12@Itgb8 | |||
}} | }} |
Latest revision as of 11:02, 26 September 2015
Short description: | p12@Itgb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Itgb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1616 |
Association with transcript: | -50bp_to_NM_177290, uc007pik.1, uc007pil.1, uc007pim.1, uc011yvv.1_5end |
EntrezGene: | Itgb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.97e-12 | 2 |
brainstem | 2.97e-12 | 2 |
myelencephalon | 2.97e-12 | 2 |
future myelencephalon | 2.97e-12 | 2 |
segmental subdivision of hindbrain | 5.45e-09 | 6 |
segmental subdivision of nervous system | 5.45e-09 | 6 |
hindbrain | 5.45e-09 | 6 |
presumptive hindbrain | 5.45e-09 | 6 |
neurectoderm | 5.51e-09 | 64 |
neural plate | 5.51e-09 | 64 |
presumptive neural plate | 5.51e-09 | 64 |
posterior neural tube | 9.79e-08 | 12 |
chordal neural plate | 9.79e-08 | 12 |
ecto-epithelium | 1.08e-07 | 73 |
neural tube | 1.50e-07 | 52 |
neural rod | 1.50e-07 | 52 |
future spinal cord | 1.50e-07 | 52 |
neural keel | 1.50e-07 | 52 |
regional part of brain | 8.12e-07 | 46 |
kidney | 8.13e-07 | 14 |
kidney mesenchyme | 8.13e-07 | 14 |
upper urinary tract | 8.13e-07 | 14 |
kidney rudiment | 8.13e-07 | 14 |
kidney field | 8.13e-07 | 14 |
cavitated compound organ | 9.22e-07 | 21 |