Personal tools

FFCP PHASE1:Mm9::chr11:53397464..53397475,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:53397464..53397475,+ |short_description=p4@Kif3a |description=CAGE_peak_4_at_Kif3a_5end |association_with_transcript=147bp_to_uc007iwo.1_5end |EntrezGene...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:53397464..53397475,+
|DHSsupport=NA
|short_description=p4@Kif3a
|DPIdataset=NA
|description=CAGE_peak_4_at_Kif3a_5end
|association_with_transcript=147bp_to_uc007iwo.1_5end
|EntrezGene=16568
|EntrezGene=16568
|HGNC=
|HGNC=
|MCL_coexpression_id=158
|TSSclassifier=NA
|UniProt=Q2A657
|UniProt=Q2A657
|association_with_transcript=147bp_to_uc007iwo.1_5end
|cluster_id=chr11:53397464..53397475,+
|description=CAGE_peak_4_at_Kif3a_5end
|id=chr11:53397464..53397475,+
|ontology_enrichment_celltype=CL:0000540!1.72e-07!33;CL:0000047!1.72e-07!33;CL:0000031!1.72e-07!33;CL:0000404!1.72e-07!33;CL:0000117!1.82e-07!23;CL:0000337!1.82e-07!23;CL:0000393!2.24e-07!39;CL:0000211!2.24e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002612,4.48e-11,3;CL:0002610,5.25e-11,3;CL:0000117,2.43e-08,23;CL:0000337,2.43e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.47e-13!73;UBERON:0005743!7.47e-13!73;UBERON:0000073!1.05e-12!75;UBERON:0001016!1.05e-12!75;UBERON:0002346!1.55e-12!71;UBERON:0003075!1.55e-12!71;UBERON:0007284!1.55e-12!71;UBERON:0000033!2.42e-12!63;UBERON:0004121!5.04e-12!102;UBERON:0000924!5.04e-12!102;UBERON:0006601!5.04e-12!102;UBERON:0003056!8.30e-12!49;UBERON:0002020!1.10e-11!34;UBERON:0001049!5.66e-11!52;UBERON:0005068!5.66e-11!52;UBERON:0006241!5.66e-11!52;UBERON:0007135!5.66e-11!52;UBERON:0000955!1.41e-10!50;UBERON:0006238!1.41e-10!50;UBERON:0002616!2.60e-10!49;UBERON:0002780!7.41e-10!39;UBERON:0001890!7.41e-10!39;UBERON:0006240!7.41e-10!39;UBERON:0003080!2.81e-09!40;UBERON:0002791!3.78e-09!29;UBERON:0003528!3.78e-09!29;UBERON:0001893!3.78e-09!29;UBERON:0002021!7.05e-09!10;UBERON:0000411!7.05e-09!10;UBERON:0001950!7.05e-09!10;UBERON:0000956!2.02e-07!21;UBERON:0001869!2.02e-07!21;UBERON:0000203!2.02e-07!21;UBERON:0002619!2.73e-07!17;UBERON:0000025!5.13e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.00e-34,10;UBERON:0000411,2.00e-34,10;UBERON:0001950,2.00e-34,10;UBERON:0002619,9.42e-24,17;UBERON:0002020,1.23e-23,34;UBERON:0000956,2.59e-22,21;UBERON:0001869,2.59e-22,21;UBERON:0000203,2.59e-22,21;UBERON:0000073,4.54e-20,54;UBERON:0003528,2.74e-18,29;UBERON:0002791,2.74e-18,29;UBERON:0001893,2.74e-18,29;UBERON:0001017,1.54e-15,73;UBERON:0001016,5.07e-15,75;UBERON:0001049,2.29e-14,52;UBERON:0005068,2.29e-14,52;UBERON:0006241,2.29e-14,52;UBERON:0007135,2.29e-14,52;UBERON:0002780,5.89e-13,39;UBERON:0001890,5.89e-13,39;UBERON:0006240,5.89e-13,39;UBERON:0002346,1.31e-12,64;UBERON:0003075,1.31e-12,64;UBERON:0007284,1.31e-12,64;UBERON:0003080,1.43e-12,40;UBERON:0004121,2.32e-12,95;UBERON:0000924,2.32e-12,95;UBERON:0006601,2.32e-12,95;UBERON:0003056,2.10e-11,49;UBERON:0002257,4.48e-11,3;UBERON:0004684,5.25e-11,3;UBERON:0002275,5.25e-11,3;UBERON:0010371,1.21e-10,73;UBERON:0002616,1.33e-10,46;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0010314,9.31e-08,92;UBERON:0001948,8.15e-07,5;UBERON:0002315,8.15e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0,0,0,0.988866362566974,0,0.299600110518405,0,1.34796496001021,0.405017814995072,0,0.285650984403804,0.441737081903227,0.367472397644862,0.383381884072945,0,2.20231761998777,1.78762273319263,1.99688493233117,0.791317726381163,0.823388792421687,0.52091337055676,0.558365998002762,0,0.916789486660861,4.41942878210502,2.13557521198654,1.3047961207771,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0.608930956624282,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0.878342391034642,0.209446706813455,0,0,0,0.127070227073065,0,0,1.50785222535437,0.173824320192276,0.255715457330331,0,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0,0.720248519221397,1.05493372485001,0.476255494059295,0.896796041993948,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,1.11218899690239,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.771335564436891,0.232533944750408,0.268273401399619,0,0.16455984991348,0.656669856316381,0.162137619091711,0.438599962275997,0,0,0.420579897128254,2.36680608472354,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.610953983535943,0.775809948670503,0.280543279561274,0.0632365371242573,0.442830443938806,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0.704070744865506,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.518054945597687,0.144649058581512,4.52373851817817,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.938686832254841,0.42366414172764,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0.546776910884101,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,2.89900944991207,1.44015003128933,0,0,0,0.129920822977795,0,0,0,0,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0,0,5.64751842617067,4.60325236507177,4.01026859407578,1.89038500578056,2.74033007908257,2.2661816921691,1.35004500046361,1.35096360967266,2.26571204492102,3.62432218226274,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.689531376628944,0.818462086339379,0.154936841185966,0,0,0,0,0.191288332068843,0,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0,0,0,0.988866362566974,0,0.299600110518405,0,1.34796496001021,0.405017814995072,0,0.285650984403804,0.441737081903227,0.367472397644862,0.383381884072945,0,2.20231761998777,1.78762273319263,1.99688493233117,0.791317726381163,0.823388792421687,0.52091337055676,0.558365998002762,0,0.916789486660861,4.41942878210502,2.13557521198654,1.3047961207771,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0.505524445014783,0,0,0,0,0.608930956624282,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0.878342391034642,0.209446706813455,0,0,0,0.127070227073065,0,0,1.50785222535437,0.173824320192276,0.255715457330331,0,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0,0.720248519221397,1.05493372485001,0.476255494059295,0.896796041993948,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,1.11218899690239,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.771335564436891,0.232533944750408,0.268273401399619,0,0.16455984991348,0.656669856316381,0.162137619091711,0.438599962275997,0,0,0.420579897128254,2.36680608472354,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0.610953983535943,0.775809948670503,0.280543279561274,0.0632365371242573,0.442830443938806,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0.704070744865506,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.518054945597687,0.144649058581512,4.52373851817817,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.938686832254841,0.42366414172764,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0.546776910884101,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,2.89900944991207,1.44015003128933,0,0,0,0.129920822977795,0,0,0,0,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0,0,5.64751842617067,4.60325236507177,4.01026859407578,1.89038500578056,2.74033007908257,2.2661816921691,1.35004500046361,1.35096360967266,2.26571204492102,3.62432218226274,0.415149390336707,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.689531376628944,0.818462086339379,0.154936841185966,0,0,0,0,0.191288332068843,0,0
|short_description=p4@Kif3a
}}
}}

Latest revision as of 16:29, 1 October 2015

Short description:p4@Kif3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Kif3a_5end
Coexpression cluster:MCL_coexpression_mm9:158
Association with transcript: 147bp_to_uc007iwo.1_5end
EntrezGene:Kif3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Kif3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe2.00e-3410
visual cortex2.00e-3410
neocortex2.00e-3410
regional part of cerebral cortex9.42e-2417
gray matter1.23e-2334
cerebral cortex2.59e-2221
cerebral hemisphere2.59e-2221
pallium2.59e-2221
regional part of nervous system4.54e-2054
brain grey matter2.74e-1829
regional part of telencephalon2.74e-1829
telencephalon2.74e-1829
central nervous system1.54e-1573
nervous system5.07e-1575
neural tube2.29e-1452
neural rod2.29e-1452
future spinal cord2.29e-1452
neural keel2.29e-1452
regional part of forebrain5.89e-1339
forebrain5.89e-1339
future forebrain5.89e-1339
neurectoderm1.31e-1264
neural plate1.31e-1264
presumptive neural plate1.31e-1264
anterior neural tube1.43e-1240
ectoderm-derived structure2.32e-1295
ectoderm2.32e-1295
presumptive ectoderm2.32e-1295
pre-chordal neural plate2.10e-1149
ventral horn of spinal cord4.48e-113
raphe nuclei5.25e-113
reticular formation5.25e-113
ecto-epithelium1.21e-1073
regional part of brain1.33e-1046
brain2.52e-1047
future brain2.52e-1047
structure with developmental contribution from neural crest9.31e-0892
regional part of spinal cord8.15e-075
gray matter of spinal cord8.15e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:53397464..53397475,%2B&oldid=4311734"