FFCP PHASE1:Mm9::chrX:161765359..161765391,-: Difference between revisions
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{{FFCP|EntrezGene=237213|HGNC=|MCL_coexpression_id=13|UniProt=Q7TNC8|association_with_transcript=-34bp_to_ENSMUST00000058787_5end|description=CAGE_peak_2_at_Glra2_5end|id=chrX:161765359..161765391,-|ontology_enrichment_celltype=CL:0000117!7.33e-21!23;CL:0000337!7.33e-21!23;CL:0000540!8.21e-18!33;CL:0000047!8.21e-18!33;CL:0000031!8.21e-18!33;CL:0000404!8.21e-18!33;CL:0000393!1.95e-13!39;CL:0000211!1.95e-13!39;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!3.02e-11!43;CL:0000055!2.42e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-24,23;CL:0000337,1.70e-24,23;CL:0000540,1.44e-14,33;CL:0000047,1.44e-14,33;CL:0000031,1.44e-14,33;CL:0000404,1.44e-14,33;CL:0000393,3.87e-11,39;CL:0000211,3.87e-11,39;CL:0002319,2.04e-09,43;CL:0000221,4.86e-09,44;CL:0000133,4.86e-09,44;CL:0002609,6.30e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.46e-32!73;UBERON:0005743!5.46e-32!73;UBERON:0000033!8.36e-31!63;UBERON:0000073!1.49e-30!75;UBERON:0001016!1.49e-30!75;UBERON:0001049!1.87e-30!52;UBERON:0005068!1.87e-30!52;UBERON:0006241!1.87e-30!52;UBERON:0007135!1.87e-30!52;UBERON:0000955!6.49e-29!50;UBERON:0006238!6.49e-29!50;UBERON:0003056!8.13e-29!49;UBERON:0002616!4.29e-28!49;UBERON:0002346!5.27e-28!71;UBERON:0003075!5.27e-28!71;UBERON:0007284!5.27e-28!71;UBERON:0003080!4.15e-26!40;UBERON:0002020!2.09e-25!34;UBERON:0002780!4.69e-25!39;UBERON:0001890!4.69e-25!39;UBERON:0006240!4.69e-25!39;UBERON:0004121!8.20e-25!102;UBERON:0000924!8.20e-25!102;UBERON:0006601!8.20e-25!102;UBERON:0002791!1.09e-20!29;UBERON:0003528!1.09e-20!29;UBERON:0001893!1.09e-20!29;UBERON:0007811!2.06e-17!86;UBERON:0000153!2.15e-14!94;UBERON:0000956!2.84e-13!21;UBERON:0001869!2.84e-13!21;UBERON:0000203!2.84e-13!21;UBERON:0002619!3.16e-10!17;UBERON:0002420!8.17e-09!8;UBERON:0007245!8.17e-09!8;UBERON:0010009!8.17e-09!8;UBERON:0010011!8.17e-09!8;UBERON:0000454!8.17e-09!8;UBERON:0002021!2.69e-08!10;UBERON:0000411!2.69e-08!10;UBERON:0001950!2.69e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-30,54;UBERON:0002020,1.29e-28,34;UBERON:0001049,1.37e-27,52;UBERON:0005068,1.37e-27,52;UBERON:0006241,1.37e-27,52;UBERON:0007135,1.37e-27,52;UBERON:0002346,8.07e-26,64;UBERON:0003075,8.07e-26,64;UBERON:0007284,8.07e-26,64;UBERON:0001017,7.16e-25,73;UBERON:0001016,8.68e-24,75;UBERON:0003528,4.70e-23,29;UBERON:0002791,4.70e-23,29;UBERON:0001893,4.70e-23,29;UBERON:0000955,1.15e-22,47;UBERON:0006238,1.15e-22,47;UBERON:0003056,5.48e-22,49;UBERON:0003080,5.91e-22,40;UBERON:0002616,8.71e-22,46;UBERON:0002780,8.04e-21,39;UBERON:0001890,8.04e-21,39;UBERON:0006240,8.04e-21,39;UBERON:0010371,8.38e-21,73;UBERON:0004121,4.59e-20,95;UBERON:0000924,4.59e-20,95;UBERON:0006601,4.59e-20,95;UBERON:0000956,2.37e-14,21;UBERON:0001869,2.37e-14,21;UBERON:0000203,2.37e-14,21;UBERON:0010314,1.44e-13,92;UBERON:0002619,8.60e-11,17;UBERON:0002420,3.54e-10,8;UBERON:0007245,3.54e-10,8;UBERON:0010009,3.54e-10,8;UBERON:0010011,3.54e-10,8;UBERON:0000454,3.54e-10,8;UBERON:0002021,3.93e-08,10;UBERON:0000411,3.93e-08,10;UBERON:0001950,3.93e-08,10;UBERON:0000369,3.06e-07,5;UBERON:0002435,3.06e-07,5;UBERON:0000204,3.06e-07,5;UBERON:0010082,3.06e-07,5;UBERON:0002240,4.00e-07,6;UBERON:0005174,4.00e-07,6;UBERON:0001137,4.00e-07,6;UBERON:0001948,9.18e-07,5;UBERON:0002315,9.18e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,6.34789175126439,1.26766280701236,0,0,0,0,0,0,0,4.56234294157302,3.10513658162888,3.36519938162211,4.28476476605705,5.74258206474195,8.81933754347669,4.2172007248024,3.67687514644008,6.60695285996332,6.12899222808901,6.60508093001847,7.64940468835124,9.14876436024097,9.89735404057844,6.42120897703176,4.50210088025344,5.04234217663473,6.77645746589436,17.3693450574906,4.65998614563251,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8850203613211,0,0,0,0,8.98743836428936,4.11750542536764,17.591609295801,6.77914848749878,5.37002460393694,5.61027720310812,8.4365456795234,0,0,0,0.841767423545896,0,0.919608417733892,1.26043490863744,0.60281927134286,1.49680298132921,3.33095672740609,2.62364828767241,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,17.2879748797198,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,4.10240903072711,0,0,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06395645178409,0.18006109403131,0.129358683782755,0.214337035031592,1.24138163549592,0.713475270408282,0.987294123612726,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,5.9842280745933,6.30185064783336,9.45192502890282,2.74033007908257,4.5323633843382,3.37511250115903,0.900642406448441,2.26571204492102,2.07104124700728,0,0.798049746802062,1.19513524027894,2.18796045361465,2.09613162627982,1.83843508450014,2.66696073361938,1.64828045791115,3.20919209591815,2.77966932940177,1.52087579934144,2.45214243801899,2.80924522409647,2.94515701062399,3.21638626151434,5.23923060411381,2.0859178670074,2.70072908649187,2.06042950401653,2.94397840268795,2.40008476669791,1.95223386775271,2.62279808942053,2.47088908274958,3.48204707536723,2.876896668317,3.47563148458268,2.10455769150274,3.12349461845482,1.12228454331548,2.37270036248348,2.36410757701352,3.27384834535751,2.63392630016142,1.92906610981141,5.49583271463481,1.87145286756327,1.93383948643468,0.191288332068843,0,0.231867835620421|short_description=p2@Glra2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237213 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TNC8 | |||
|association_with_transcript=-34bp_to_ENSMUST00000058787_5end | |||
|cluster_id=chrX:161765359..161765391,- | |||
|description=CAGE_peak_2_at_Glra2_5end | |||
|id=chrX:161765359..161765391,- | |||
|ontology_enrichment_celltype=CL:0000117!7.33e-21!23;CL:0000337!7.33e-21!23;CL:0000540!8.21e-18!33;CL:0000047!8.21e-18!33;CL:0000031!8.21e-18!33;CL:0000404!8.21e-18!33;CL:0000393!1.95e-13!39;CL:0000211!1.95e-13!39;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!3.02e-11!43;CL:0000055!2.42e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-24,23;CL:0000337,1.70e-24,23;CL:0000540,1.44e-14,33;CL:0000047,1.44e-14,33;CL:0000031,1.44e-14,33;CL:0000404,1.44e-14,33;CL:0000393,3.87e-11,39;CL:0000211,3.87e-11,39;CL:0002319,2.04e-09,43;CL:0000221,4.86e-09,44;CL:0000133,4.86e-09,44;CL:0002609,6.30e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.46e-32!73;UBERON:0005743!5.46e-32!73;UBERON:0000033!8.36e-31!63;UBERON:0000073!1.49e-30!75;UBERON:0001016!1.49e-30!75;UBERON:0001049!1.87e-30!52;UBERON:0005068!1.87e-30!52;UBERON:0006241!1.87e-30!52;UBERON:0007135!1.87e-30!52;UBERON:0000955!6.49e-29!50;UBERON:0006238!6.49e-29!50;UBERON:0003056!8.13e-29!49;UBERON:0002616!4.29e-28!49;UBERON:0002346!5.27e-28!71;UBERON:0003075!5.27e-28!71;UBERON:0007284!5.27e-28!71;UBERON:0003080!4.15e-26!40;UBERON:0002020!2.09e-25!34;UBERON:0002780!4.69e-25!39;UBERON:0001890!4.69e-25!39;UBERON:0006240!4.69e-25!39;UBERON:0004121!8.20e-25!102;UBERON:0000924!8.20e-25!102;UBERON:0006601!8.20e-25!102;UBERON:0002791!1.09e-20!29;UBERON:0003528!1.09e-20!29;UBERON:0001893!1.09e-20!29;UBERON:0007811!2.06e-17!86;UBERON:0000153!2.15e-14!94;UBERON:0000956!2.84e-13!21;UBERON:0001869!2.84e-13!21;UBERON:0000203!2.84e-13!21;UBERON:0002619!3.16e-10!17;UBERON:0002420!8.17e-09!8;UBERON:0007245!8.17e-09!8;UBERON:0010009!8.17e-09!8;UBERON:0010011!8.17e-09!8;UBERON:0000454!8.17e-09!8;UBERON:0002021!2.69e-08!10;UBERON:0000411!2.69e-08!10;UBERON:0001950!2.69e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-30,54;UBERON:0002020,1.29e-28,34;UBERON:0001049,1.37e-27,52;UBERON:0005068,1.37e-27,52;UBERON:0006241,1.37e-27,52;UBERON:0007135,1.37e-27,52;UBERON:0002346,8.07e-26,64;UBERON:0003075,8.07e-26,64;UBERON:0007284,8.07e-26,64;UBERON:0001017,7.16e-25,73;UBERON:0001016,8.68e-24,75;UBERON:0003528,4.70e-23,29;UBERON:0002791,4.70e-23,29;UBERON:0001893,4.70e-23,29;UBERON:0000955,1.15e-22,47;UBERON:0006238,1.15e-22,47;UBERON:0003056,5.48e-22,49;UBERON:0003080,5.91e-22,40;UBERON:0002616,8.71e-22,46;UBERON:0002780,8.04e-21,39;UBERON:0001890,8.04e-21,39;UBERON:0006240,8.04e-21,39;UBERON:0010371,8.38e-21,73;UBERON:0004121,4.59e-20,95;UBERON:0000924,4.59e-20,95;UBERON:0006601,4.59e-20,95;UBERON:0000956,2.37e-14,21;UBERON:0001869,2.37e-14,21;UBERON:0000203,2.37e-14,21;UBERON:0010314,1.44e-13,92;UBERON:0002619,8.60e-11,17;UBERON:0002420,3.54e-10,8;UBERON:0007245,3.54e-10,8;UBERON:0010009,3.54e-10,8;UBERON:0010011,3.54e-10,8;UBERON:0000454,3.54e-10,8;UBERON:0002021,3.93e-08,10;UBERON:0000411,3.93e-08,10;UBERON:0001950,3.93e-08,10;UBERON:0000369,3.06e-07,5;UBERON:0002435,3.06e-07,5;UBERON:0000204,3.06e-07,5;UBERON:0010082,3.06e-07,5;UBERON:0002240,4.00e-07,6;UBERON:0005174,4.00e-07,6;UBERON:0001137,4.00e-07,6;UBERON:0001948,9.18e-07,5;UBERON:0002315,9.18e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,6.34789175126439,1.26766280701236,0,0,0,0,0,0,0,4.56234294157302,3.10513658162888,3.36519938162211,4.28476476605705,5.74258206474195,8.81933754347669,4.2172007248024,3.67687514644008,6.60695285996332,6.12899222808901,6.60508093001847,7.64940468835124,9.14876436024097,9.89735404057844,6.42120897703176,4.50210088025344,5.04234217663473,6.77645746589436,17.3693450574906,4.65998614563251,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8850203613211,0,0,0,0,8.98743836428936,4.11750542536764,17.591609295801,6.77914848749878,5.37002460393694,5.61027720310812,8.4365456795234,0,0,0,0.841767423545896,0,0.919608417733892,1.26043490863744,0.60281927134286,1.49680298132921,3.33095672740609,2.62364828767241,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,17.2879748797198,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,4.10240903072711,0,0,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06395645178409,0.18006109403131,0.129358683782755,0.214337035031592,1.24138163549592,0.713475270408282,0.987294123612726,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,5.9842280745933,6.30185064783336,9.45192502890282,2.74033007908257,4.5323633843382,3.37511250115903,0.900642406448441,2.26571204492102,2.07104124700728,0,0.798049746802062,1.19513524027894,2.18796045361465,2.09613162627982,1.83843508450014,2.66696073361938,1.64828045791115,3.20919209591815,2.77966932940177,1.52087579934144,2.45214243801899,2.80924522409647,2.94515701062399,3.21638626151434,5.23923060411381,2.0859178670074,2.70072908649187,2.06042950401653,2.94397840268795,2.40008476669791,1.95223386775271,2.62279808942053,2.47088908274958,3.48204707536723,2.876896668317,3.47563148458268,2.10455769150274,3.12349461845482,1.12228454331548,2.37270036248348,2.36410757701352,3.27384834535751,2.63392630016142,1.92906610981141,5.49583271463481,1.87145286756327,1.93383948643468,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Glra2 | |||
}} |
Latest revision as of 18:25, 1 October 2015
Short description: | p2@Glra2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Glra2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -34bp_to_ENSMUST00000058787_5end |
EntrezGene: | Glra2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.70e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-24 | 23 |
neuron | 1.44e-14 | 33 |
neuronal stem cell | 1.44e-14 | 33 |
neuroblast | 1.44e-14 | 33 |
electrically signaling cell | 1.44e-14 | 33 |
electrically responsive cell | 3.87e-11 | 39 |
electrically active cell | 3.87e-11 | 39 |
neural cell | 2.04e-09 | 43 |
ectodermal cell | 4.86e-09 | 44 |
neurectodermal cell | 4.86e-09 | 44 |
neuron of cerebral cortex | 6.30e-07 | 6 |