FFCP PHASE1:Mm9::chrX:103450706..103450715,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=331491|HGNC=|MCL_coexpression_id=31|UniProt=A2AP83,Q3UKF7|association_with_transcript=0bp_to_ENSMUST00000091282,NM_001033424,uc009ubr.1_5end|description=CAGE_peak_1_at_Fnd3c2_5end|id=chrX:103450706..103450715,-|ontology_enrichment_celltype=CL:0000349!8.55e-27!3;CL:0000351!8.55e-27!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.88e-08,3;CL:0000351,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!7.38e-28!3;UBERON:0000478!7.38e-28!3;UBERON:0000158!7.38e-28!3;UBERON:0000358!8.55e-27!3;UBERON:0000307!8.55e-27!3;UBERON:0005795!8.04e-21!4;UBERON:0000995!8.04e-21!4;UBERON:0001987!3.79e-19!2;UBERON:0003124!3.79e-19!2;UBERON:0004340!3.79e-19!2;UBERON:0003975!8.39e-17!5;UBERON:0003134!9.54e-11!8;UBERON:0000305!2.01e-10!1;UBERON:0006834!4.59e-10!1;UBERON:0004175!1.28e-09!9;UBERON:0000474!1.28e-09!9;UBERON:0003100!5.67e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0000305,5.07e-23,1;UBERON:0005795,8.43e-23,4;UBERON:0000995,8.43e-23,4;UBERON:0003975,1.74e-18,5;UBERON:0003134,5.55e-12,8;UBERON:0004175,9.02e-11,9;UBERON:0000474,9.02e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0003100,5.29e-09,11;UBERON:0004871,1.34e-08,3;UBERON:0000358,1.88e-08,3;UBERON:0000307,1.88e-08,3;UBERON:0007010,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.5406789651559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1500240047283,414.76719475136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0,0,0,0.665957860122194,0.0897138566094757,8.22634620183984,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Fnd3c2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=331491 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=A2AP83,Q3UKF7 | |||
|association_with_transcript=0bp_to_ENSMUST00000091282,NM_001033424,uc009ubr.1_5end | |||
|cluster_id=chrX:103450706..103450715,- | |||
|description=CAGE_peak_1_at_Fnd3c2_5end | |||
|id=chrX:103450706..103450715,- | |||
|ontology_enrichment_celltype=CL:0000349!8.55e-27!3;CL:0000351!8.55e-27!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.88e-08,3;CL:0000351,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.38e-28!3;UBERON:0000478!7.38e-28!3;UBERON:0000158!7.38e-28!3;UBERON:0000358!8.55e-27!3;UBERON:0000307!8.55e-27!3;UBERON:0005795!8.04e-21!4;UBERON:0000995!8.04e-21!4;UBERON:0001987!3.79e-19!2;UBERON:0003124!3.79e-19!2;UBERON:0004340!3.79e-19!2;UBERON:0003975!8.39e-17!5;UBERON:0003134!9.54e-11!8;UBERON:0000305!2.01e-10!1;UBERON:0006834!4.59e-10!1;UBERON:0004175!1.28e-09!9;UBERON:0000474!1.28e-09!9;UBERON:0003100!5.67e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0000305,5.07e-23,1;UBERON:0005795,8.43e-23,4;UBERON:0000995,8.43e-23,4;UBERON:0003975,1.74e-18,5;UBERON:0003134,5.55e-12,8;UBERON:0004175,9.02e-11,9;UBERON:0000474,9.02e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0003100,5.29e-09,11;UBERON:0004871,1.34e-08,3;UBERON:0000358,1.88e-08,3;UBERON:0000307,1.88e-08,3;UBERON:0007010,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.5406789651559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1500240047283,414.76719475136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0,0,0,0.665957860122194,0.0897138566094757,8.22634620183984,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Fnd3c2 | |||
}} |
Latest revision as of 12:36, 1 October 2015
Short description: | p1@Fnd3c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fnd3c2_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 0bp_to_ENSMUST00000091282, NM_001033424, uc009ubr.1_5end |
EntrezGene: | Fnd3c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.88e-08 | 3 |
trophoblast cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-65 | 3 |
extraembryonic structure | 1.33e-65 | 3 |
membranous layer | 1.33e-65 | 3 |
placenta | 2.75e-44 | 2 |
chorion | 2.75e-44 | 2 |
allantois | 2.75e-44 | 2 |
amnion | 5.07e-23 | 1 |
embryonic uterus | 8.43e-23 | 4 |
uterus | 8.43e-23 | 4 |
internal female genitalia | 1.74e-18 | 5 |
female reproductive organ | 5.55e-12 | 8 |
internal genitalia | 9.02e-11 | 9 |
female reproductive system | 9.02e-11 | 9 |
organ component layer | 4.35e-09 | 24 |
female organism | 5.29e-09 | 11 |
somatic layer of lateral plate mesoderm | 1.34e-08 | 3 |
blastocyst | 1.88e-08 | 3 |
blastula | 1.88e-08 | 3 |
cleaving embryo | 1.88e-08 | 3 |