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FFCP PHASE1:Mm9::chrX:101866353..101866373,-: Difference between revisions

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{{FFCP|EntrezGene=108672|HGNC=|UniProt=Q8BGJ0,B1AVY9|association_with_transcript=29bp_to_ENSMUST00000042070,NM_175358,uc009uaj.2_5end|description=CAGE_peak_4_at_Zdhhc15_5end|id=chrX:101866353..101866373,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,3.51e-08,9;CL:0000789,3.51e-08,9;CL:0002420,3.51e-08,9;CL:0002419,3.51e-08,9;CL:0000790,3.51e-08,9;CL:0000624,5.19e-07,8;CL:0000542,8.36e-07,13;CL:0000051,8.36e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.67e-08!29;UBERON:0003408!8.04e-08!24;UBERON:0002370!9.25e-08!23;UBERON:0000974!9.25e-08!23;UBERON:0004807!9.25e-08!23;UBERON:0005058!9.25e-08!23;UBERON:0003351!9.25e-08!23;UBERON:0009113!9.25e-08!23;UBERON:0003295!9.25e-08!23;UBERON:0009722!9.25e-08!23;UBERON:0005562!9.25e-08!23;UBERON:0007690!9.25e-08!23;UBERON:0006562!5.45e-07!24;UBERON:0001557!5.45e-07!24;UBERON:0001042!5.45e-07!24;UBERON:0008814!5.45e-07!24;UBERON:0009145!5.45e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.29e-19,43;UBERON:0002370,3.46e-15,23;UBERON:0000974,3.46e-15,23;UBERON:0004807,3.46e-15,23;UBERON:0005058,3.46e-15,23;UBERON:0003351,3.46e-15,23;UBERON:0009113,3.46e-15,23;UBERON:0003295,3.46e-15,23;UBERON:0009722,3.46e-15,23;UBERON:0005562,3.46e-15,23;UBERON:0007690,3.46e-15,23;UBERON:0006562,2.42e-14,24;UBERON:0003408,2.42e-14,24;UBERON:0001557,2.42e-14,24;UBERON:0001042,2.42e-14,24;UBERON:0008814,2.42e-14,24;UBERON:0009145,2.42e-14,24;UBERON:0007811,3.91e-13,36;UBERON:0004177,1.86e-12,29;UBERON:0005057,1.86e-12,29;UBERON:0000072,3.42e-12,27;UBERON:0000065,1.50e-09,41;UBERON:0000077,1.91e-09,35;UBERON:0001004,3.43e-09,42;UBERON:0010708,9.35e-09,8;UBERON:0002102,9.73e-08,7;UBERON:0004710,9.73e-08,7;UBERON:0005419,9.73e-08,7;UBERON:0005417,9.73e-08,7;UBERON:0005729,9.73e-08,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,6.71441281896197,1.68946466582,1.87251621057595,0,0.159544317990673,4.45121897821135,5.15780374272085,0,0.607425802169478,0.699561878128147,0,0,0,0.255129870453209,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,1.1665793944457,0.979904951377538,0,0,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,0.622137673850866,0.405017814995072,0,0.285650984403804,0,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.153606533256243,0.527545150920775,0.731901148819277,2.08365348222704,0.279182999001381,0,0,0.294628585473668,1.28134512719193,0.745597783301202,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.55362730188303,0,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.23517741427141,0,0.988779870937496,0,0,0.485300549842228,0,0,0,0,0,0,0.599075622529601,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0.695297280769106,0.255715457330331,0,0.162241263067758,0.407357455401265,0.248813941220186,0,0,2.21204753036596,2.5289231487682,1.80062129805349,1.05493372485001,0.680364991513279,0.512454881139399,0.281105173679186,0.258703370739016,3.01795190105979,3.9712276835242,3.51902248327898,2.19195732427575,2.22437799380478,0.696504333044333,1.02891068203972,0.796137067273973,0,0.257347907114715,0.284163499395593,1.24275463521301,1.40715635988658,1.08037236876609,1.18372367792605,1.57411385397923,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.411618449517138,0.660837565967596,0.264450566663544,2.13288250535234,0.928946687441754,0.902072229254653,1.21010114774006,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,1.5994791765362,0,1.22190796707189,1.35766741017338,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,2.08440552947533,1.46668478797823,0.678980343100753,1.64283173801951,0.837531287209079,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,1.69946445308487,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,0.340439605753788,1.8006109403131,0.905510786479282,1.07168517515796,2.12808280370728,1.42695054081656,1.48094118541909,0,0.704015124191131,0.21183207086382,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0.512612642393558,1.44470807574256,0.370389054739423,0.565105371014073,0.410082683163076,0.686334519619568,0,0.279902904647316,0.276399947608848,0,3.00519193902079,0.813277868507395,1.08005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,1.34564891439581,0.827292452285488,0.972255941720238,1.16243841129958,1.68956125490778,0.938857909166032,0.911430693907651,0.629156066554265,0,0,3.16011120628178,0.608175645870493,1.23253148597793,1.55904987573354,1.79026695667481,0.79472541912506,1.9231271923195,1.9199638532695,2.52416124870369,1.143102099825,1.81487133246313,4.0932309910696,3.55983814069219,2.57129184799452,0,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,1.35004500046361,0,0,0,0.62272408550506,1.19707462020309,2.90247129782028,0.486213434136588,0.419226325255965,0.551530525350042,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.561849044819294,0.768301828858431,0.918967503289812,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.70990322463735,0.476872379894642,0.872078499793971,0.752875043322645,0.507687647350059,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.689531376628944,0.818462086339379,1.23949472948773,0.385813221962283,0,0.935726433781634,0.214871054048298,0.956441660344217,0,0.231867835620421|short_description=p4@Zdhhc15}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108672
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BGJ0,B1AVY9
|association_with_transcript=29bp_to_ENSMUST00000042070,NM_175358,uc009uaj.2_5end
|cluster_id=chrX:101866353..101866373,-
|description=CAGE_peak_4_at_Zdhhc15_5end
|id=chrX:101866353..101866373,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,3.51e-08,9;CL:0000789,3.51e-08,9;CL:0002420,3.51e-08,9;CL:0002419,3.51e-08,9;CL:0000790,3.51e-08,9;CL:0000624,5.19e-07,8;CL:0000542,8.36e-07,13;CL:0000051,8.36e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.67e-08!29;UBERON:0003408!8.04e-08!24;UBERON:0002370!9.25e-08!23;UBERON:0000974!9.25e-08!23;UBERON:0004807!9.25e-08!23;UBERON:0005058!9.25e-08!23;UBERON:0003351!9.25e-08!23;UBERON:0009113!9.25e-08!23;UBERON:0003295!9.25e-08!23;UBERON:0009722!9.25e-08!23;UBERON:0005562!9.25e-08!23;UBERON:0007690!9.25e-08!23;UBERON:0006562!5.45e-07!24;UBERON:0001557!5.45e-07!24;UBERON:0001042!5.45e-07!24;UBERON:0008814!5.45e-07!24;UBERON:0009145!5.45e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.29e-19,43;UBERON:0002370,3.46e-15,23;UBERON:0000974,3.46e-15,23;UBERON:0004807,3.46e-15,23;UBERON:0005058,3.46e-15,23;UBERON:0003351,3.46e-15,23;UBERON:0009113,3.46e-15,23;UBERON:0003295,3.46e-15,23;UBERON:0009722,3.46e-15,23;UBERON:0005562,3.46e-15,23;UBERON:0007690,3.46e-15,23;UBERON:0006562,2.42e-14,24;UBERON:0003408,2.42e-14,24;UBERON:0001557,2.42e-14,24;UBERON:0001042,2.42e-14,24;UBERON:0008814,2.42e-14,24;UBERON:0009145,2.42e-14,24;UBERON:0007811,3.91e-13,36;UBERON:0004177,1.86e-12,29;UBERON:0005057,1.86e-12,29;UBERON:0000072,3.42e-12,27;UBERON:0000065,1.50e-09,41;UBERON:0000077,1.91e-09,35;UBERON:0001004,3.43e-09,42;UBERON:0010708,9.35e-09,8;UBERON:0002102,9.73e-08,7;UBERON:0004710,9.73e-08,7;UBERON:0005419,9.73e-08,7;UBERON:0005417,9.73e-08,7;UBERON:0005729,9.73e-08,7
|phase1_expression=0.320297694209588,0,0,0,0,0,0,6.71441281896197,1.68946466582,1.87251621057595,0,0.159544317990673,4.45121897821135,5.15780374272085,0,0.607425802169478,0.699561878128147,0,0,0,0.255129870453209,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,1.1665793944457,0.979904951377538,0,0,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.599200221036809,0.384218305321555,0.622137673850866,0.405017814995072,0,0.285650984403804,0,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.153606533256243,0.527545150920775,0.731901148819277,2.08365348222704,0.279182999001381,0,0,0.294628585473668,1.28134512719193,0.745597783301202,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.55362730188303,0,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.23517741427141,0,0.988779870937496,0,0,0.485300549842228,0,0,0,0,0,0,0.599075622529601,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0.695297280769106,0.255715457330331,0,0.162241263067758,0.407357455401265,0.248813941220186,0,0,2.21204753036596,2.5289231487682,1.80062129805349,1.05493372485001,0.680364991513279,0.512454881139399,0.281105173679186,0.258703370739016,3.01795190105979,3.9712276835242,3.51902248327898,2.19195732427575,2.22437799380478,0.696504333044333,1.02891068203972,0.796137067273973,0,0.257347907114715,0.284163499395593,1.24275463521301,1.40715635988658,1.08037236876609,1.18372367792605,1.57411385397923,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.411618449517138,0.660837565967596,0.264450566663544,2.13288250535234,0.928946687441754,0.902072229254653,1.21010114774006,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,1.5994791765362,0,1.22190796707189,1.35766741017338,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,2.08440552947533,1.46668478797823,0.678980343100753,1.64283173801951,0.837531287209079,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,1.69946445308487,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,0.340439605753788,1.8006109403131,0.905510786479282,1.07168517515796,2.12808280370728,1.42695054081656,1.48094118541909,0,0.704015124191131,0.21183207086382,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0.512612642393558,1.44470807574256,0.370389054739423,0.565105371014073,0.410082683163076,0.686334519619568,0,0.279902904647316,0.276399947608848,0,3.00519193902079,0.813277868507395,1.08005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,1.34564891439581,0.827292452285488,0.972255941720238,1.16243841129958,1.68956125490778,0.938857909166032,0.911430693907651,0.629156066554265,0,0,3.16011120628178,0.608175645870493,1.23253148597793,1.55904987573354,1.79026695667481,0.79472541912506,1.9231271923195,1.9199638532695,2.52416124870369,1.143102099825,1.81487133246313,4.0932309910696,3.55983814069219,2.57129184799452,0,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,1.35004500046361,0,0,0,0.62272408550506,1.19707462020309,2.90247129782028,0.486213434136588,0.419226325255965,0.551530525350042,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.561849044819294,0.768301828858431,0.918967503289812,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.70990322463735,0.476872379894642,0.872078499793971,0.752875043322645,0.507687647350059,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.689531376628944,0.818462086339379,1.23949472948773,0.385813221962283,0,0.935726433781634,0.214871054048298,0.956441660344217,0,0.231867835620421
|short_description=p4@Zdhhc15
}}

Latest revision as of 12:09, 1 October 2015

Short description:p4@Zdhhc15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Zdhhc15_5end
Coexpression cluster:NA
Association with transcript: 29bp_to_ENSMUST00000042070, NM_175358, uc009uaj.2_5end
EntrezGene:Zdhhc15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Zdhhc15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.51e-089
alpha-beta T cell3.51e-089
immature T cell3.51e-089
mature T cell3.51e-089
immature alpha-beta T cell3.51e-089
CD4-positive, alpha-beta T cell5.19e-078
lymphocyte8.36e-0713
common lymphoid progenitor8.36e-0713

Uber anatomy
Ontology termp-valuen
anterior region of body5.29e-1943
thymus3.46e-1523
neck3.46e-1523
respiratory system epithelium3.46e-1523
hemolymphoid system gland3.46e-1523
pharyngeal epithelium3.46e-1523
thymic region3.46e-1523
pharyngeal gland3.46e-1523
entire pharyngeal arch endoderm3.46e-1523
thymus primordium3.46e-1523
early pharyngeal endoderm3.46e-1523
pharynx2.42e-1424
gland of gut2.42e-1424
upper respiratory tract2.42e-1424
chordate pharynx2.42e-1424
pharyngeal arch system2.42e-1424
pharyngeal region of foregut2.42e-1424
craniocervical region3.91e-1336
hemopoietic organ1.86e-1229
immune organ1.86e-1229
segment of respiratory tract3.42e-1227
respiratory tract1.50e-0941
mixed endoderm/mesoderm-derived structure1.91e-0935
respiratory system3.43e-0942
pectoral complex9.35e-098
forelimb9.73e-087
pectoral appendage9.73e-087
pectoral appendage bud9.73e-087
forelimb bud9.73e-087
forelimb/pectoral fin field9.73e-087
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