FFCP PHASE1:Mm9::chr9:14707004..14707015,-: Difference between revisions
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{{FFCP|EntrezGene=64931|HGNC=|MCL_coexpression_id=29|UniProt=B0FFS9,B0FFS7,Q9EQF4|association_with_transcript=-37bp_to_uc012gok.1,uc012gol.1,uc012gom.1_5end|description=CAGE_peak_5_at_Folr4_5end|id=chr9:14707004..14707015,-|ontology_enrichment_celltype=CL:0000791!4.26e-20!9;CL:0000789!4.26e-20!9;CL:0002420!4.26e-20!9;CL:0002419!4.26e-20!9;CL:0000790!4.26e-20!9;CL:0000624!3.50e-18!8;CL:0000084!4.65e-16!11;CL:0000827!4.65e-16!11;CL:0000838!1.52e-14!12;CL:0000893!6.04e-14!6;CL:0002489!6.04e-14!6;CL:0000898!6.04e-14!6;CL:0000809!6.04e-14!6;CL:0000810!6.04e-14!6;CL:0000895!6.04e-14!6;CL:0000808!6.04e-14!6;CL:0000894!6.04e-14!6;CL:0000806!6.04e-14!6;CL:0000807!6.04e-14!6;CL:0000805!6.04e-14!6;CL:0002425!6.04e-14!6;CL:0002436!6.04e-14!6;CL:0002427!6.04e-14!6;CL:0002428!6.04e-14!6;CL:0002429!6.04e-14!6;CL:0002433!6.04e-14!6;CL:0002431!6.04e-14!6;CL:0002432!6.04e-14!6;CL:0000542!2.89e-13!13;CL:0000051!2.89e-13!13;CL:0000738!1.16e-09!17;CL:0002087!1.16e-09!17;CL:0002031!2.39e-07!25|ontology_enrichment_celltype_v019_2=CL:0000624,3.99e-77,8;CL:0000791,1.41e-68,9;CL:0000789,1.41e-68,9;CL:0002420,1.41e-68,9;CL:0002419,1.41e-68,9;CL:0000790,1.41e-68,9;CL:0000893,1.04e-57,6;CL:0002489,1.04e-57,6;CL:0000898,1.04e-57,6;CL:0000809,1.04e-57,6;CL:0000810,1.04e-57,6;CL:0000895,1.04e-57,6;CL:0000808,1.04e-57,6;CL:0000894,1.04e-57,6;CL:0000806,1.04e-57,6;CL:0000807,1.04e-57,6;CL:0000805,1.04e-57,6;CL:0002425,1.04e-57,6;CL:0002436,1.04e-57,6;CL:0002427,1.04e-57,6;CL:0002428,1.04e-57,6;CL:0002429,1.04e-57,6;CL:0002433,1.04e-57,6;CL:0002431,1.04e-57,6;CL:0002432,1.04e-57,6;CL:0000084,3.89e-56,11;CL:0000827,3.89e-56,11;CL:0000838,1.81e-51,12;CL:0000542,1.62e-47,13;CL:0000051,1.62e-47,13;CL:0000738,2.37e-36,17;CL:0002087,2.37e-36,17;CL:0002031,1.03e-24,25;CL:0000988,2.75e-19,32;CL:0002032,2.75e-19,32;CL:0000037,2.75e-19,32;CL:0000837,2.75e-19,32;CL:0002320,2.30e-13,46;CL:0000134,2.30e-13,46;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000219,2.38e-11,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.04e-32!23;UBERON:0000974!1.04e-32!23;UBERON:0004807!1.04e-32!23;UBERON:0005058!1.04e-32!23;UBERON:0003351!1.04e-32!23;UBERON:0009113!1.04e-32!23;UBERON:0003295!1.04e-32!23;UBERON:0009722!1.04e-32!23;UBERON:0005562!1.04e-32!23;UBERON:0007690!1.04e-32!23;UBERON:0006562!4.05e-31!24;UBERON:0003408!4.05e-31!24;UBERON:0001557!4.05e-31!24;UBERON:0001042!4.05e-31!24;UBERON:0008814!4.05e-31!24;UBERON:0009145!4.05e-31!24;UBERON:0004177!1.97e-30!29;UBERON:0000072!4.64e-27!27;UBERON:0000065!1.63e-25!41;UBERON:0001004!9.41e-25!42;UBERON:0000063!7.59e-22!35;UBERON:0002193!7.14e-20!48;UBERON:0002390!1.83e-19!45;UBERON:0003061!1.83e-19!45;UBERON:0005057!8.57e-15!51;UBERON:0005911!1.44e-12!69;UBERON:0001041!1.02e-11!92;UBERON:0002405!1.12e-11!70;UBERON:0003081!5.84e-11!88;UBERON:0000077!9.42e-11!97;UBERON:0003929!1.27e-10!55;UBERON:0002368!2.53e-09!60;UBERON:0002530!2.82e-09!65;UBERON:0004921!3.53e-08!126;UBERON:0004185!3.53e-08!126;UBERON:0000490!4.93e-08!66;UBERON:0001007!6.15e-08!128;UBERON:0001555!6.15e-08!128;UBERON:0007026!6.15e-08!128;UBERON:0000949!7.20e-08!72;UBERON:0004119!1.05e-07!130;UBERON:0000925!1.05e-07!130;UBERON:0006595!1.05e-07!130;UBERON:0003104!1.38e-07!131;UBERON:0009142!1.38e-07!131;UBERON:0001048!1.80e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.57e-15,23;UBERON:0000974,3.57e-15,23;UBERON:0004807,3.57e-15,23;UBERON:0005058,3.57e-15,23;UBERON:0003351,3.57e-15,23;UBERON:0009113,3.57e-15,23;UBERON:0003295,3.57e-15,23;UBERON:0009722,3.57e-15,23;UBERON:0005562,3.57e-15,23;UBERON:0007690,3.57e-15,23;UBERON:0006562,1.52e-14,24;UBERON:0003408,1.52e-14,24;UBERON:0001557,1.52e-14,24;UBERON:0001042,1.52e-14,24;UBERON:0008814,1.52e-14,24;UBERON:0009145,1.52e-14,24;UBERON:0002384,2.30e-13,46;UBERON:0000072,6.26e-13,27;UBERON:0004177,4.88e-12,29;UBERON:0005057,4.88e-12,29;UBERON:0000029,5.74e-11,1;UBERON:0001097,5.74e-11,1;UBERON:0003968,5.74e-11,1;UBERON:0001467,5.74e-11,1;UBERON:0000077,5.73e-10,35;UBERON:0002193,9.43e-10,48;UBERON:0002405,9.43e-10,48;UBERON:0007811,1.09e-09,36;UBERON:0000065,1.69e-08,41;UBERON:0001004,2.70e-08,42;UBERON:0000153,4.24e-08,43;UBERON:0002390,9.82e-08,45;UBERON:0003061,9.82e-08,45|phase1_expression=0,0,0,0,0,0,0,22.0800883085095,1.267098499365,1.17032263160997,3.25314139628459,1.19658238493005,2.9104124088305,4.37102012094987,0,0,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.205421914329655,0.389762468933385,0.716106782669926,0.198681354781265,0.721172697119813,0.295379054349154,0.201932899896295,0.15241361331,0.604957110821043,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Folr4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64931 | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=B0FFS9,B0FFS7,Q9EQF4 | |||
|association_with_transcript=-37bp_to_uc012gok.1,uc012gol.1,uc012gom.1_5end | |||
|cluster_id=chr9:14707004..14707015,- | |||
|description=CAGE_peak_5_at_Folr4_5end | |||
|id=chr9:14707004..14707015,- | |||
|ontology_enrichment_celltype=CL:0000791!4.26e-20!9;CL:0000789!4.26e-20!9;CL:0002420!4.26e-20!9;CL:0002419!4.26e-20!9;CL:0000790!4.26e-20!9;CL:0000624!3.50e-18!8;CL:0000084!4.65e-16!11;CL:0000827!4.65e-16!11;CL:0000838!1.52e-14!12;CL:0000893!6.04e-14!6;CL:0002489!6.04e-14!6;CL:0000898!6.04e-14!6;CL:0000809!6.04e-14!6;CL:0000810!6.04e-14!6;CL:0000895!6.04e-14!6;CL:0000808!6.04e-14!6;CL:0000894!6.04e-14!6;CL:0000806!6.04e-14!6;CL:0000807!6.04e-14!6;CL:0000805!6.04e-14!6;CL:0002425!6.04e-14!6;CL:0002436!6.04e-14!6;CL:0002427!6.04e-14!6;CL:0002428!6.04e-14!6;CL:0002429!6.04e-14!6;CL:0002433!6.04e-14!6;CL:0002431!6.04e-14!6;CL:0002432!6.04e-14!6;CL:0000542!2.89e-13!13;CL:0000051!2.89e-13!13;CL:0000738!1.16e-09!17;CL:0002087!1.16e-09!17;CL:0002031!2.39e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.99e-77,8;CL:0000791,1.41e-68,9;CL:0000789,1.41e-68,9;CL:0002420,1.41e-68,9;CL:0002419,1.41e-68,9;CL:0000790,1.41e-68,9;CL:0000893,1.04e-57,6;CL:0002489,1.04e-57,6;CL:0000898,1.04e-57,6;CL:0000809,1.04e-57,6;CL:0000810,1.04e-57,6;CL:0000895,1.04e-57,6;CL:0000808,1.04e-57,6;CL:0000894,1.04e-57,6;CL:0000806,1.04e-57,6;CL:0000807,1.04e-57,6;CL:0000805,1.04e-57,6;CL:0002425,1.04e-57,6;CL:0002436,1.04e-57,6;CL:0002427,1.04e-57,6;CL:0002428,1.04e-57,6;CL:0002429,1.04e-57,6;CL:0002433,1.04e-57,6;CL:0002431,1.04e-57,6;CL:0002432,1.04e-57,6;CL:0000084,3.89e-56,11;CL:0000827,3.89e-56,11;CL:0000838,1.81e-51,12;CL:0000542,1.62e-47,13;CL:0000051,1.62e-47,13;CL:0000738,2.37e-36,17;CL:0002087,2.37e-36,17;CL:0002031,1.03e-24,25;CL:0000988,2.75e-19,32;CL:0002032,2.75e-19,32;CL:0000037,2.75e-19,32;CL:0000837,2.75e-19,32;CL:0002320,2.30e-13,46;CL:0000134,2.30e-13,46;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000219,2.38e-11,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.04e-32!23;UBERON:0000974!1.04e-32!23;UBERON:0004807!1.04e-32!23;UBERON:0005058!1.04e-32!23;UBERON:0003351!1.04e-32!23;UBERON:0009113!1.04e-32!23;UBERON:0003295!1.04e-32!23;UBERON:0009722!1.04e-32!23;UBERON:0005562!1.04e-32!23;UBERON:0007690!1.04e-32!23;UBERON:0006562!4.05e-31!24;UBERON:0003408!4.05e-31!24;UBERON:0001557!4.05e-31!24;UBERON:0001042!4.05e-31!24;UBERON:0008814!4.05e-31!24;UBERON:0009145!4.05e-31!24;UBERON:0004177!1.97e-30!29;UBERON:0000072!4.64e-27!27;UBERON:0000065!1.63e-25!41;UBERON:0001004!9.41e-25!42;UBERON:0000063!7.59e-22!35;UBERON:0002193!7.14e-20!48;UBERON:0002390!1.83e-19!45;UBERON:0003061!1.83e-19!45;UBERON:0005057!8.57e-15!51;UBERON:0005911!1.44e-12!69;UBERON:0001041!1.02e-11!92;UBERON:0002405!1.12e-11!70;UBERON:0003081!5.84e-11!88;UBERON:0000077!9.42e-11!97;UBERON:0003929!1.27e-10!55;UBERON:0002368!2.53e-09!60;UBERON:0002530!2.82e-09!65;UBERON:0004921!3.53e-08!126;UBERON:0004185!3.53e-08!126;UBERON:0000490!4.93e-08!66;UBERON:0001007!6.15e-08!128;UBERON:0001555!6.15e-08!128;UBERON:0007026!6.15e-08!128;UBERON:0000949!7.20e-08!72;UBERON:0004119!1.05e-07!130;UBERON:0000925!1.05e-07!130;UBERON:0006595!1.05e-07!130;UBERON:0003104!1.38e-07!131;UBERON:0009142!1.38e-07!131;UBERON:0001048!1.80e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.57e-15,23;UBERON:0000974,3.57e-15,23;UBERON:0004807,3.57e-15,23;UBERON:0005058,3.57e-15,23;UBERON:0003351,3.57e-15,23;UBERON:0009113,3.57e-15,23;UBERON:0003295,3.57e-15,23;UBERON:0009722,3.57e-15,23;UBERON:0005562,3.57e-15,23;UBERON:0007690,3.57e-15,23;UBERON:0006562,1.52e-14,24;UBERON:0003408,1.52e-14,24;UBERON:0001557,1.52e-14,24;UBERON:0001042,1.52e-14,24;UBERON:0008814,1.52e-14,24;UBERON:0009145,1.52e-14,24;UBERON:0002384,2.30e-13,46;UBERON:0000072,6.26e-13,27;UBERON:0004177,4.88e-12,29;UBERON:0005057,4.88e-12,29;UBERON:0000029,5.74e-11,1;UBERON:0001097,5.74e-11,1;UBERON:0003968,5.74e-11,1;UBERON:0001467,5.74e-11,1;UBERON:0000077,5.73e-10,35;UBERON:0002193,9.43e-10,48;UBERON:0002405,9.43e-10,48;UBERON:0007811,1.09e-09,36;UBERON:0000065,1.69e-08,41;UBERON:0001004,2.70e-08,42;UBERON:0000153,4.24e-08,43;UBERON:0002390,9.82e-08,45;UBERON:0003061,9.82e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,22.0800883085095,1.267098499365,1.17032263160997,3.25314139628459,1.19658238493005,2.9104124088305,4.37102012094987,0,0,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.205421914329655,0.389762468933385,0.716106782669926,0.198681354781265,0.721172697119813,0.295379054349154,0.201932899896295,0.15241361331,0.604957110821043,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Folr4 | |||
}} |
Latest revision as of 10:11, 26 September 2015
Short description: | p5@Folr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Folr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | -37bp_to_uc012gok.1, uc012gol.1, uc012gom.1_5end |
EntrezGene: | Folr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.57e-15 | 23 |
neck | 3.57e-15 | 23 |
respiratory system epithelium | 3.57e-15 | 23 |
hemolymphoid system gland | 3.57e-15 | 23 |
pharyngeal epithelium | 3.57e-15 | 23 |
thymic region | 3.57e-15 | 23 |
pharyngeal gland | 3.57e-15 | 23 |
entire pharyngeal arch endoderm | 3.57e-15 | 23 |
thymus primordium | 3.57e-15 | 23 |
early pharyngeal endoderm | 3.57e-15 | 23 |
pharynx | 1.52e-14 | 24 |
gland of gut | 1.52e-14 | 24 |
upper respiratory tract | 1.52e-14 | 24 |
chordate pharynx | 1.52e-14 | 24 |
pharyngeal arch system | 1.52e-14 | 24 |
pharyngeal region of foregut | 1.52e-14 | 24 |
connective tissue | 2.30e-13 | 46 |
segment of respiratory tract | 6.26e-13 | 27 |
hemopoietic organ | 4.88e-12 | 29 |
immune organ | 4.88e-12 | 29 |
lymph node | 5.74e-11 | 1 |
axillary lymph node | 5.74e-11 | 1 |
peripheral lymph node | 5.74e-11 | 1 |
shoulder | 5.74e-11 | 1 |
mixed endoderm/mesoderm-derived structure | 5.73e-10 | 35 |
hemolymphoid system | 9.43e-10 | 48 |
immune system | 9.43e-10 | 48 |
craniocervical region | 1.09e-09 | 36 |
respiratory tract | 1.69e-08 | 41 |
respiratory system | 2.70e-08 | 42 |
anterior region of body | 4.24e-08 | 43 |
hematopoietic system | 9.82e-08 | 45 |
blood island | 9.82e-08 | 45 |