FFCP PHASE1:Mm9::chr9:123169932..123169940,-: Difference between revisions
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{{FFCP|EntrezGene=72309|HGNC=|MCL_coexpression_id=13|UniProt=B2RTM1|association_with_transcript=-25bp_to_ENSMUST00000068140,NM_001002267,uc009sgb.1_5end|description=CAGE_peak_3_at_Tmem158_5end|id=chr9:123169932..123169940,-|ontology_enrichment_celltype=CL:0000221!1.94e-16!44;CL:0000133!1.94e-16!44;CL:0002319!3.38e-16!43;CL:0000540!8.88e-15!33;CL:0000047!8.88e-15!33;CL:0000031!8.88e-15!33;CL:0000404!8.88e-15!33;CL:0000055!1.49e-14!50;CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000393!1.21e-13!39;CL:0000211!1.21e-13!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-25,23;CL:0000337,1.42e-25,23;CL:0002319,1.07e-20,43;CL:0000221,4.50e-20,44;CL:0000133,4.50e-20,44;CL:0000540,7.59e-20,33;CL:0000047,7.59e-20,33;CL:0000031,7.59e-20,33;CL:0000404,7.59e-20,33;CL:0000393,6.31e-16,39;CL:0000211,6.31e-16,39;CL:0002321,3.28e-10,70;CL:0000120,4.80e-07,3;CL:0002613,9.31e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.20e-30!75;UBERON:0001016!1.20e-30!75;UBERON:0001017!1.29e-29!73;UBERON:0005743!1.29e-29!73;UBERON:0001049!4.53e-23!52;UBERON:0005068!4.53e-23!52;UBERON:0006241!4.53e-23!52;UBERON:0007135!4.53e-23!52;UBERON:0004121!1.50e-22!102;UBERON:0000924!1.50e-22!102;UBERON:0006601!1.50e-22!102;UBERON:0000955!1.79e-21!50;UBERON:0006238!1.79e-21!50;UBERON:0002616!6.43e-21!49;UBERON:0002020!2.50e-20!34;UBERON:0003080!3.27e-19!40;UBERON:0002346!1.33e-18!71;UBERON:0003075!1.33e-18!71;UBERON:0007284!1.33e-18!71;UBERON:0002780!1.60e-18!39;UBERON:0001890!1.60e-18!39;UBERON:0006240!1.60e-18!39;UBERON:0000033!2.85e-18!63;UBERON:0002791!8.60e-17!29;UBERON:0003528!8.60e-17!29;UBERON:0001893!8.60e-17!29;UBERON:0003056!5.61e-16!49;UBERON:0000956!1.62e-11!21;UBERON:0001869!1.62e-11!21;UBERON:0000203!1.62e-11!21;UBERON:0002619!1.09e-09!17;UBERON:0007811!1.34e-08!86;UBERON:0000025!6.59e-08!114;UBERON:0004111!8.22e-08!122;UBERON:0000153!1.97e-07!94;UBERON:0002021!5.96e-07!10;UBERON:0000411!5.96e-07!10;UBERON:0001950!5.96e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.23e-39,75;UBERON:0001017,9.83e-39,73;UBERON:0002020,2.38e-37,34;UBERON:0000073,2.64e-37,54;UBERON:0001049,3.34e-32,52;UBERON:0005068,3.34e-32,52;UBERON:0006241,3.34e-32,52;UBERON:0007135,3.34e-32,52;UBERON:0004121,6.62e-29,95;UBERON:0000924,6.62e-29,95;UBERON:0006601,6.62e-29,95;UBERON:0003528,1.28e-28,29;UBERON:0002791,1.28e-28,29;UBERON:0001893,1.28e-28,29;UBERON:0003080,1.53e-27,40;UBERON:0000955,2.07e-26,47;UBERON:0006238,2.07e-26,47;UBERON:0002780,5.49e-26,39;UBERON:0001890,5.49e-26,39;UBERON:0006240,5.49e-26,39;UBERON:0002616,3.40e-25,46;UBERON:0002346,1.58e-24,64;UBERON:0003075,1.58e-24,64;UBERON:0007284,1.58e-24,64;UBERON:0003056,3.82e-21,49;UBERON:0010371,1.95e-20,73;UBERON:0000956,5.42e-16,21;UBERON:0001869,5.42e-16,21;UBERON:0000203,5.42e-16,21;UBERON:0002619,3.05e-15,17;UBERON:0002420,9.51e-15,8;UBERON:0007245,9.51e-15,8;UBERON:0010009,9.51e-15,8;UBERON:0010011,9.51e-15,8;UBERON:0000454,9.51e-15,8;UBERON:0010314,1.89e-14,92;UBERON:0002021,1.19e-13,10;UBERON:0000411,1.19e-13,10;UBERON:0001950,1.19e-13,10;UBERON:0000025,9.03e-12,114;UBERON:0000369,1.52e-10,5;UBERON:0002435,1.52e-10,5;UBERON:0000204,1.52e-10,5;UBERON:0010082,1.52e-10,5;UBERON:0004111,1.98e-10,122;UBERON:0011216,3.19e-10,194;UBERON:0001948,3.97e-10,5;UBERON:0002315,3.97e-10,5;UBERON:0002240,2.39e-08,6;UBERON:0005174,2.39e-08,6;UBERON:0001137,2.39e-08,6;UBERON:0002950,1.75e-07,4;UBERON:0001891,1.75e-07,4;UBERON:0009616,1.75e-07,4;UBERON:0010286,1.75e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,3.12956537739216,0,1.09843091367236,0.388859798148567,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,3.03474691289397,4.7609188134483,3.1691570175309,0.338844532069132,1.77858959222228,0,0,0,0.898800331555214,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,3.14216082844184,3.53389665522582,0.61245399607477,1.62937300731002,0.919218786610021,2.20231761998777,1.40456071893706,2.30409799884365,1.97829431595291,3.93396867490361,4.16730696445408,1.3959149950069,2.25105044012672,2.44477196442896,2.35702868378934,3.84403538157578,2.42319279572891,0.681535739998656,1.28471652181535,0,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.520455980298408,0.913396434936424,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0.599902730993408,0,2.84602214869163,3.20250421973039,5.15182843662744,3.12883776346098,3.06858548796397,2.70124457927428,3.0825839982874,0.611036183101898,0.124406970610093,1.51633655060205,0,0.130120442962704,0.229902104433473,0.360124259610698,0.753524089178575,0.204109497453984,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72309 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=B2RTM1 | |||
|association_with_transcript=-25bp_to_ENSMUST00000068140,NM_001002267,uc009sgb.1_5end | |||
|cluster_id=chr9:123169932..123169940,- | |||
|description=CAGE_peak_3_at_Tmem158_5end | |||
|id=chr9:123169932..123169940,- | |||
|ontology_enrichment_celltype=CL:0000221!1.94e-16!44;CL:0000133!1.94e-16!44;CL:0002319!3.38e-16!43;CL:0000540!8.88e-15!33;CL:0000047!8.88e-15!33;CL:0000031!8.88e-15!33;CL:0000404!8.88e-15!33;CL:0000055!1.49e-14!50;CL:0000117!2.02e-14!23;CL:0000337!2.02e-14!23;CL:0000393!1.21e-13!39;CL:0000211!1.21e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-25,23;CL:0000337,1.42e-25,23;CL:0002319,1.07e-20,43;CL:0000221,4.50e-20,44;CL:0000133,4.50e-20,44;CL:0000540,7.59e-20,33;CL:0000047,7.59e-20,33;CL:0000031,7.59e-20,33;CL:0000404,7.59e-20,33;CL:0000393,6.31e-16,39;CL:0000211,6.31e-16,39;CL:0002321,3.28e-10,70;CL:0000120,4.80e-07,3;CL:0002613,9.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-30!75;UBERON:0001016!1.20e-30!75;UBERON:0001017!1.29e-29!73;UBERON:0005743!1.29e-29!73;UBERON:0001049!4.53e-23!52;UBERON:0005068!4.53e-23!52;UBERON:0006241!4.53e-23!52;UBERON:0007135!4.53e-23!52;UBERON:0004121!1.50e-22!102;UBERON:0000924!1.50e-22!102;UBERON:0006601!1.50e-22!102;UBERON:0000955!1.79e-21!50;UBERON:0006238!1.79e-21!50;UBERON:0002616!6.43e-21!49;UBERON:0002020!2.50e-20!34;UBERON:0003080!3.27e-19!40;UBERON:0002346!1.33e-18!71;UBERON:0003075!1.33e-18!71;UBERON:0007284!1.33e-18!71;UBERON:0002780!1.60e-18!39;UBERON:0001890!1.60e-18!39;UBERON:0006240!1.60e-18!39;UBERON:0000033!2.85e-18!63;UBERON:0002791!8.60e-17!29;UBERON:0003528!8.60e-17!29;UBERON:0001893!8.60e-17!29;UBERON:0003056!5.61e-16!49;UBERON:0000956!1.62e-11!21;UBERON:0001869!1.62e-11!21;UBERON:0000203!1.62e-11!21;UBERON:0002619!1.09e-09!17;UBERON:0007811!1.34e-08!86;UBERON:0000025!6.59e-08!114;UBERON:0004111!8.22e-08!122;UBERON:0000153!1.97e-07!94;UBERON:0002021!5.96e-07!10;UBERON:0000411!5.96e-07!10;UBERON:0001950!5.96e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.23e-39,75;UBERON:0001017,9.83e-39,73;UBERON:0002020,2.38e-37,34;UBERON:0000073,2.64e-37,54;UBERON:0001049,3.34e-32,52;UBERON:0005068,3.34e-32,52;UBERON:0006241,3.34e-32,52;UBERON:0007135,3.34e-32,52;UBERON:0004121,6.62e-29,95;UBERON:0000924,6.62e-29,95;UBERON:0006601,6.62e-29,95;UBERON:0003528,1.28e-28,29;UBERON:0002791,1.28e-28,29;UBERON:0001893,1.28e-28,29;UBERON:0003080,1.53e-27,40;UBERON:0000955,2.07e-26,47;UBERON:0006238,2.07e-26,47;UBERON:0002780,5.49e-26,39;UBERON:0001890,5.49e-26,39;UBERON:0006240,5.49e-26,39;UBERON:0002616,3.40e-25,46;UBERON:0002346,1.58e-24,64;UBERON:0003075,1.58e-24,64;UBERON:0007284,1.58e-24,64;UBERON:0003056,3.82e-21,49;UBERON:0010371,1.95e-20,73;UBERON:0000956,5.42e-16,21;UBERON:0001869,5.42e-16,21;UBERON:0000203,5.42e-16,21;UBERON:0002619,3.05e-15,17;UBERON:0002420,9.51e-15,8;UBERON:0007245,9.51e-15,8;UBERON:0010009,9.51e-15,8;UBERON:0010011,9.51e-15,8;UBERON:0000454,9.51e-15,8;UBERON:0010314,1.89e-14,92;UBERON:0002021,1.19e-13,10;UBERON:0000411,1.19e-13,10;UBERON:0001950,1.19e-13,10;UBERON:0000025,9.03e-12,114;UBERON:0000369,1.52e-10,5;UBERON:0002435,1.52e-10,5;UBERON:0000204,1.52e-10,5;UBERON:0010082,1.52e-10,5;UBERON:0004111,1.98e-10,122;UBERON:0011216,3.19e-10,194;UBERON:0001948,3.97e-10,5;UBERON:0002315,3.97e-10,5;UBERON:0002240,2.39e-08,6;UBERON:0005174,2.39e-08,6;UBERON:0001137,2.39e-08,6;UBERON:0002950,1.75e-07,4;UBERON:0001891,1.75e-07,4;UBERON:0009616,1.75e-07,4;UBERON:0010286,1.75e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,3.12956537739216,0,1.09843091367236,0.388859798148567,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,3.03474691289397,4.7609188134483,3.1691570175309,0.338844532069132,1.77858959222228,0,0,0,0.898800331555214,2.30530983192933,1.14058573539325,0.945041568321835,0.630974884054146,3.14216082844184,3.53389665522582,0.61245399607477,1.62937300731002,0.919218786610021,2.20231761998777,1.40456071893706,2.30409799884365,1.97829431595291,3.93396867490361,4.16730696445408,1.3959149950069,2.25105044012672,2.44477196442896,2.35702868378934,3.84403538157578,2.42319279572891,0.681535739998656,1.28471652181535,0,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.520455980298408,0.913396434936424,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0.599902730993408,0,2.84602214869163,3.20250421973039,5.15182843662744,3.12883776346098,3.06858548796397,2.70124457927428,3.0825839982874,0.611036183101898,0.124406970610093,1.51633655060205,0,0.130120442962704,0.229902104433473,0.360124259610698,0.753524089178575,0.204109497453984,0,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.402619256281115,2.52347938276953,2.26390147234426,0,0,1.06644125267617,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0.315508219416257,0.390438744296638,0,0.716906393857656,1.11399337041197,1.13230612315533,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0.141940085208269,1.24645922567079,0.488660878060728,0.494910368917606,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.646793418913773,1.07168517515796,0,0.356737635204141,0.329098041204242,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,0.741701208042039,0,0,0,0.376736914009382,0,0.457556346413045,0.169978429993855,0.559805809294632,0,0,0.632671987162271,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.549454872801795,0.857473516316263,0,0.564751842617067,1.84130094602871,2.86447756719698,2.749650917499,2.05524755931193,6.0431511791176,2.70009000092722,2.70192721934532,1.35942722695261,1.55328093525546,0,0.798049746802062,0.170733605754134,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,0,0.25347929989024,0.943131706930381,0.842773567228942,0.640251524048693,0.804096565378586,0.952587382566147,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.592302255241736,0.73171189149109,0,0.135804113845862,0.561142271657738,0.593175090620871,0.886540341380071,0,0.619747364743864,0.771626443924566,2.74791635731741,0.935726433781634,0.859484216193193,0.57386499620653,0,0.231867835620421 | |||
|short_description=p3@Tmem158 | |||
}} |
Latest revision as of 09:09, 26 September 2015
Short description: | p3@Tmem158 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem158_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -25bp_to_ENSMUST00000068140, NM_001002267, uc009sgb.1_5end |
EntrezGene: | Tmem158 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.42e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.42e-25 | 23 |
neural cell | 1.07e-20 | 43 |
ectodermal cell | 4.50e-20 | 44 |
neurectodermal cell | 4.50e-20 | 44 |
neuron | 7.59e-20 | 33 |
neuronal stem cell | 7.59e-20 | 33 |
neuroblast | 7.59e-20 | 33 |
electrically signaling cell | 7.59e-20 | 33 |
electrically responsive cell | 6.31e-16 | 39 |
electrically active cell | 6.31e-16 | 39 |
embryonic cell | 3.28e-10 | 70 |
granule cell | 4.80e-07 | 3 |
striatum neuron | 9.31e-07 | 3 |