FFCP PHASE1:Mm9::chr11:3024046..3024057,+: Difference between revisions
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|id=chr11:3024046..3024057,+
|short_description=p3@Pisd-ps3
|description=CAGE_peak_3_at_Pisd-ps3_5end
|association_with_transcript=16bp_to_NR_003518_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66776 | |EntrezGene=66776 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=484 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_NR_003518_5end | |||
|cluster_id=chr11:3024046..3024057,+ | |||
|description=CAGE_peak_3_at_Pisd-ps3_5end | |||
|id=chr11:3024046..3024057,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.43e-22!66;CL:0002031!2.72e-21!25;CL:0000838!6.49e-18!12;CL:0002320!5.05e-17!46;CL:0000134!5.05e-17!46;CL:0000219!5.77e-17!54;CL:0000542!2.17e-16!13;CL:0000051!2.17e-16!13;CL:0000988!7.79e-16!32;CL:0002032!7.79e-16!32;CL:0000037!7.79e-16!32;CL:0000566!7.79e-16!32;CL:0000837!7.79e-16!32;CL:0000084!8.56e-16!11;CL:0000827!8.56e-16!11;CL:0000548!1.25e-15!115;CL:0000004!1.25e-15!115;CL:0000255!1.25e-15!115;CL:0000791!1.99e-15!9;CL:0000789!1.99e-15!9;CL:0002420!1.99e-15!9;CL:0002419!1.99e-15!9;CL:0000790!1.99e-15!9;CL:0002371!4.66e-15!118;CL:0000738!8.71e-15!17;CL:0002087!8.71e-15!17;CL:0000144!1.62e-14!121;CL:0000012!1.62e-14!121;CL:0000624!3.07e-13!8;CL:0000553!2.09e-10!6;CL:0000556!2.09e-10!6;CL:0000893!2.76e-09!6;CL:0002489!2.76e-09!6;CL:0000898!2.76e-09!6;CL:0000809!2.76e-09!6;CL:0000810!2.76e-09!6;CL:0000895!2.76e-09!6;CL:0000808!2.76e-09!6;CL:0000894!2.76e-09!6;CL:0000806!2.76e-09!6;CL:0000807!2.76e-09!6;CL:0000805!2.76e-09!6;CL:0002425!2.76e-09!6;CL:0002436!2.76e-09!6;CL:0002427!2.76e-09!6;CL:0002428!2.76e-09!6;CL:0002429!2.76e-09!6;CL:0002433!2.76e-09!6;CL:0002431!2.76e-09!6;CL:0002432!2.76e-09!6;CL:0000034!2.30e-08!97;CL:0000349!3.88e-08!3;CL:0000351!3.88e-08!3;CL:0000414!6.45e-08!11;CL:0000068!7.16e-08!3;CL:0002202!7.16e-08!3;CL:0000069!7.16e-08!3;CL:0002632!7.16e-08!3;CL:0002368!7.16e-08!3;CL:0000307!7.16e-08!3;CL:0000377!7.16e-08!3;CL:0000215!1.11e-07!3;CL:0000630!5.40e-07!3;CL:0000050!8.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.36e-12,25;CL:0002320,3.51e-11,46;CL:0000134,3.51e-11,46;CL:0000219,3.13e-09,54;CL:0000988,4.26e-09,32;CL:0002032,4.26e-09,32;CL:0000037,4.26e-09,32;CL:0000837,4.26e-09,32;CL:0000838,2.86e-08,12;CL:0000738,4.52e-08,17;CL:0002087,4.52e-08,17;CL:0000542,1.27e-07,13;CL:0000051,1.27e-07,13;CL:0000553,6.19e-07,6;CL:0000556,6.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.05e-17!46;UBERON:0000358!3.88e-08!3;UBERON:0000307!3.88e-08!3;UBERON:0003126!7.16e-08!3;UBERON:0001005!7.16e-08!3;UBERON:0007196!7.16e-08!3;UBERON:0001558!7.16e-08!3;UBERON:0002193!4.04e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.51e-11,46;UBERON:0001962,6.10e-10,2;UBERON:0001961,6.10e-10,2;UBERON:0001744,6.10e-10,2;UBERON:0002465,6.81e-07,3 | |||
|phase1_expression=0,0,0,2.11724947914781,4.50806156951712,0,0,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,1.02720437958723,0.437102012094987,0,0.404950534779652,0.699561878128147,1.41957974411207,2.05671650408608,1.69755860719212,0,0,1.04479915655574,2.07990149631429,2.98232065387321,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,3.76823835312181,3.44169550792555,0,0,0,0,0,0,0.519572009205738,1.7666978725517,0.281686839553361,2.56652954828636,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,1.16628013592318,1.51096154727671,0,0,0,0,0,0,0,0,2.57779773515531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,2.11724947914781,4.50806156951712,0,0,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,1.02720437958723,0.437102012094987,0,0.404950534779652,0.699561878128147,1.41957974411207,2.05671650408608,1.69755860719212,0,0,1.04479915655574,2.07990149631429,2.98232065387321,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,3.76823835312181,3.44169550792555,0,0,0,0,0,0,0.519572009205738,1.7666978725517,0.281686839553361,2.56652954828636,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,1.16628013592318,1.51096154727671,0,0,0,0,0,0,0,0,2.57779773515531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Pisd-ps3 | |||
}} | }} |
Latest revision as of 06:35, 27 September 2015
Short description: | p3@Pisd-ps3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pisd-ps3_5end |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | 16bp_to_NR_003518_5end |
EntrezGene: | Pisd-ps3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.36e-12 | 25 |
connective tissue cell | 3.51e-11 | 46 |
mesenchymal cell | 3.51e-11 | 46 |
motile cell | 3.13e-09 | 54 |
hematopoietic cell | 4.26e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.26e-09 | 32 |
hematopoietic stem cell | 4.26e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.26e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.86e-08 | 12 |
leukocyte | 4.52e-08 | 17 |
nongranular leukocyte | 4.52e-08 | 17 |
lymphocyte | 1.27e-07 | 13 |
common lymphoid progenitor | 1.27e-07 | 13 |
megakaryocyte progenitor cell | 6.19e-07 | 6 |
megakaryocyte | 6.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.51e-11 | 46 |
gut-associated lymphoid tissue | 6.10e-10 | 2 |
mucosa-associated lymphoid tissue | 6.10e-10 | 2 |
lymphoid tissue | 6.10e-10 | 2 |
lymphoid system | 6.81e-07 | 3 |