FFCP PHASE1:Mm9::chr8:74225661..74225683,-: Difference between revisions
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{{FFCP|EntrezGene=72297|HGNC=|MCL_coexpression_id=12|UniProt=Q5JCS9|association_with_transcript=4bp_to_ENSMUST00000034260_5end|description=CAGE_peak_2_at_B3gnt3_5end|id=chr8:74225661..74225683,-|ontology_enrichment_celltype=CL:0002076!1.10e-09!15;CL:0000066!1.55e-07!25;CL:0000223!2.70e-07!20;CL:0002563!6.22e-07!9;CL:0002251!6.22e-07!9|ontology_enrichment_celltype_v019_2=CL:0002076,6.13e-17,15;CL:0000066,3.79e-15,25;CL:0000223,2.10e-13,20;CL:0002563,9.68e-12,9;CL:0002251,9.68e-12,9;CL:0000239,1.16e-08,6;CL:0000677,1.16e-08,6;CL:0000584,1.16e-08,6;CL:0000075,3.03e-07,7;CL:0000473,8.13e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.23e-12!59;UBERON:0004119!4.03e-11!130;UBERON:0000925!4.03e-11!130;UBERON:0006595!4.03e-11!130;UBERON:0001007!1.60e-10!128;UBERON:0001555!1.60e-10!128;UBERON:0007026!1.60e-10!128;UBERON:0000344!2.23e-10!15;UBERON:0000160!3.68e-10!43;UBERON:0004921!9.69e-10!126;UBERON:0004185!9.69e-10!126;UBERON:0001242!2.18e-09!13;UBERON:0000060!2.18e-09!13;UBERON:0001262!2.18e-09!13;UBERON:0004786!2.18e-09!13;UBERON:0004923!1.42e-08!24;UBERON:0003350!6.22e-07!9;UBERON:0004808!6.22e-07!9;UBERON:0001277!6.22e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-30,31;UBERON:0005409,1.87e-28,47;UBERON:0000344,3.01e-18,15;UBERON:0004119,8.88e-17,118;UBERON:0000925,8.88e-17,118;UBERON:0006595,8.88e-17,118;UBERON:0001007,1.89e-16,116;UBERON:0001555,1.89e-16,116;UBERON:0007026,1.89e-16,116;UBERON:0001242,2.24e-16,13;UBERON:0001262,2.24e-16,13;UBERON:0004786,2.24e-16,13;UBERON:0004921,4.85e-15,114;UBERON:0004923,1.56e-12,24;UBERON:0003350,9.68e-12,9;UBERON:0004808,9.68e-12,9;UBERON:0001277,9.68e-12,9;UBERON:0000485,3.68e-09,11|phase1_expression=0,12.9120900826564,14.5599756604652,11.7961042409664,9.5170188689806,6.5472916045637,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.51983330145495,4.12936705920906,12.0588712464154,12.9228598847722,8.83432054012145,4.3705386474966,5.54466285471848,8.64748991555688,0,0,0,4.62162591602039,5.65197794218874,4.49172583777212,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,1.7997994345628,8.89979726310277,4.2628806896766,2.39680088414724,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,5.50742528533188,1.72084775396277,0,0,0.649776417447669,0,0.842666520790511,0.511290967734173,0,0.70667914902068,0,2.56652954828636,2.54805239706646,7.11066703153331,3.46385665617943,5.57391704045217,1.01104889002957,1.37020655662872,0.258937883647172,0.445326417194474,0,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.628332956648377,5.19109432242185,0.722996784599558,0,0.485300549842228,0.441683036920787,0,5.59175283654366,0,0,12.0064815948038,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.373220911830279,0,0.631325567659422,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0.938104239924385,0,0.710234206755631,0.787056926989615,0.308534225774757,0.930135779001631,0.804820204198858,0.583826711835847,0.493679549740441,0.820837320395476,0.56748166682099,0.877199924551994,1.3173006917463,0.939444931322602,0,0.102904612379284,32.3810407324122,7.1401652999157,0,0,1.28867461322093,1.4117846723634,2.00140239460383,1.90225626112559,16.6085171540579,4.28217282282428,2.76468729680296,3.97912944082302,1.75467678407208,10.7858329038507,14.6973873914792,12.1476176685164,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.569128834118316,0.442830443938806,0.470996183524124,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0.72353147925725,0,1.15078454980324,0,0,0,0,0.936113019343682,1.01031551178845,0.538192240565737,0,1.47802552133284,0.189491411770485,0.162964976442026,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.491589944147214,1.20879487306127,0.723245292907558,7.53956419696361,3.80733978673097,5.90117127622843,1.65562047782839,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.64970122972535,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,1.80899805217755,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0,1.64270195644597,0.847328283455281,0.882113592219848,0.32977250588296,0,0.422190474497091,0.477489376012546,0.656563598980245,7.57850175237612,0.18542530201051,0.170870880797853,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0.138199973804424,20.0480829783174,0.316335993581135,0.203319467126849,0.756037385752609,1.46361807210128,2.40198820120795,2.83215127408124,3.14083131756277,5.75863072364865,12.9614973291793,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.403304740547362,0,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,1.70456327558004,1.67884616364078,0.965947970160952,2.43987218086537,4.39563898241436,3.00115730710692,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.689225627467359,1.42888107384922,0.927074607558844,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.25384382367503,0.548783918618318,0.526139422875686,0.271608227691724,0,0.237270036248348,1.18205378850676,0,0.464810523557898,0.771626443924566,0.249810577937946,0.935726433781634,1.28922632428979,0.382576664137687,0.220591419119515,0.695603506861264|short_description=p2@B3gnt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72297 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q5JCS9 | |||
|association_with_transcript=4bp_to_ENSMUST00000034260_5end | |||
|cluster_id=chr8:74225661..74225683,- | |||
|description=CAGE_peak_2_at_B3gnt3_5end | |||
|id=chr8:74225661..74225683,- | |||
|ontology_enrichment_celltype=CL:0002076!1.10e-09!15;CL:0000066!1.55e-07!25;CL:0000223!2.70e-07!20;CL:0002563!6.22e-07!9;CL:0002251!6.22e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.13e-17,15;CL:0000066,3.79e-15,25;CL:0000223,2.10e-13,20;CL:0002563,9.68e-12,9;CL:0002251,9.68e-12,9;CL:0000239,1.16e-08,6;CL:0000677,1.16e-08,6;CL:0000584,1.16e-08,6;CL:0000075,3.03e-07,7;CL:0000473,8.13e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.23e-12!59;UBERON:0004119!4.03e-11!130;UBERON:0000925!4.03e-11!130;UBERON:0006595!4.03e-11!130;UBERON:0001007!1.60e-10!128;UBERON:0001555!1.60e-10!128;UBERON:0007026!1.60e-10!128;UBERON:0000344!2.23e-10!15;UBERON:0000160!3.68e-10!43;UBERON:0004921!9.69e-10!126;UBERON:0004185!9.69e-10!126;UBERON:0001242!2.18e-09!13;UBERON:0000060!2.18e-09!13;UBERON:0001262!2.18e-09!13;UBERON:0004786!2.18e-09!13;UBERON:0004923!1.42e-08!24;UBERON:0003350!6.22e-07!9;UBERON:0004808!6.22e-07!9;UBERON:0001277!6.22e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.47e-30,31;UBERON:0005409,1.87e-28,47;UBERON:0000344,3.01e-18,15;UBERON:0004119,8.88e-17,118;UBERON:0000925,8.88e-17,118;UBERON:0006595,8.88e-17,118;UBERON:0001007,1.89e-16,116;UBERON:0001555,1.89e-16,116;UBERON:0007026,1.89e-16,116;UBERON:0001242,2.24e-16,13;UBERON:0001262,2.24e-16,13;UBERON:0004786,2.24e-16,13;UBERON:0004921,4.85e-15,114;UBERON:0004923,1.56e-12,24;UBERON:0003350,9.68e-12,9;UBERON:0004808,9.68e-12,9;UBERON:0001277,9.68e-12,9;UBERON:0000485,3.68e-09,11 | |||
|phase1_expression=0,12.9120900826564,14.5599756604652,11.7961042409664,9.5170188689806,6.5472916045637,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,3.51983330145495,4.12936705920906,12.0588712464154,12.9228598847722,8.83432054012145,4.3705386474966,5.54466285471848,8.64748991555688,0,0,0,4.62162591602039,5.65197794218874,4.49172583777212,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,1.7997994345628,8.89979726310277,4.2628806896766,2.39680088414724,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,5.50742528533188,1.72084775396277,0,0,0.649776417447669,0,0.842666520790511,0.511290967734173,0,0.70667914902068,0,2.56652954828636,2.54805239706646,7.11066703153331,3.46385665617943,5.57391704045217,1.01104889002957,1.37020655662872,0.258937883647172,0.445326417194474,0,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.628332956648377,5.19109432242185,0.722996784599558,0,0.485300549842228,0.441683036920787,0,5.59175283654366,0,0,12.0064815948038,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.373220911830279,0,0.631325567659422,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0.938104239924385,0,0.710234206755631,0.787056926989615,0.308534225774757,0.930135779001631,0.804820204198858,0.583826711835847,0.493679549740441,0.820837320395476,0.56748166682099,0.877199924551994,1.3173006917463,0.939444931322602,0,0.102904612379284,32.3810407324122,7.1401652999157,0,0,1.28867461322093,1.4117846723634,2.00140239460383,1.90225626112559,16.6085171540579,4.28217282282428,2.76468729680296,3.97912944082302,1.75467678407208,10.7858329038507,14.6973873914792,12.1476176685164,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.569128834118316,0.442830443938806,0.470996183524124,0.493588655687202,0.592905254174298,0.166845105716094,0.393117990226406,0,0.202860121388503,0.72353147925725,0,1.15078454980324,0,0,0,0,0.936113019343682,1.01031551178845,0.538192240565737,0,1.47802552133284,0.189491411770485,0.162964976442026,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.491589944147214,1.20879487306127,0.723245292907558,7.53956419696361,3.80733978673097,5.90117127622843,1.65562047782839,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.64970122972535,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,1.80899805217755,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.329098041204242,0,1.64270195644597,0.847328283455281,0.882113592219848,0.32977250588296,0,0.422190474497091,0.477489376012546,0.656563598980245,7.57850175237612,0.18542530201051,0.170870880797853,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0.138199973804424,20.0480829783174,0.316335993581135,0.203319467126849,0.756037385752609,1.46361807210128,2.40198820120795,2.83215127408124,3.14083131756277,5.75863072364865,12.9614973291793,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.403304740547362,0,0.192423683280659,0.116876902181569,0.680191150845634,0.221985953374065,1.70456327558004,1.67884616364078,0.965947970160952,2.43987218086537,4.39563898241436,3.00115730710692,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.689225627467359,1.42888107384922,0.927074607558844,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.476872379894642,0.581385666529314,0.376437521661322,0.25384382367503,0.548783918618318,0.526139422875686,0.271608227691724,0,0.237270036248348,1.18205378850676,0,0.464810523557898,0.771626443924566,0.249810577937946,0.935726433781634,1.28922632428979,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p2@B3gnt3 | |||
}} |
Latest revision as of 18:36, 25 September 2015
Short description: | p2@B3gnt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B3gnt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 4bp_to_ENSMUST00000034260_5end |
EntrezGene: | B3gnt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.13e-17 | 15 |
epithelial cell | 3.79e-15 | 25 |
endodermal cell | 2.10e-13 | 20 |
intestinal epithelial cell | 9.68e-12 | 9 |
epithelial cell of alimentary canal | 9.68e-12 | 9 |
brush border epithelial cell | 1.16e-08 | 6 |
gut absorptive cell | 1.16e-08 | 6 |
enterocyte | 1.16e-08 | 6 |
columnar/cuboidal epithelial cell | 3.03e-07 | 7 |
defensive cell | 8.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.47e-30 | 31 |
gastrointestinal system | 1.87e-28 | 47 |
mucosa | 3.01e-18 | 15 |
endoderm-derived structure | 8.88e-17 | 118 |
endoderm | 8.88e-17 | 118 |
presumptive endoderm | 8.88e-17 | 118 |
digestive system | 1.89e-16 | 116 |
digestive tract | 1.89e-16 | 116 |
primitive gut | 1.89e-16 | 116 |
intestinal mucosa | 2.24e-16 | 13 |
wall of intestine | 2.24e-16 | 13 |
gastrointestinal system mucosa | 2.24e-16 | 13 |
subdivision of digestive tract | 4.85e-15 | 114 |
organ component layer | 1.56e-12 | 24 |
epithelium of mucosa | 9.68e-12 | 9 |
gastrointestinal system epithelium | 9.68e-12 | 9 |
intestinal epithelium | 9.68e-12 | 9 |
simple columnar epithelium | 3.68e-09 | 11 |