FFCP PHASE1:Mm9::chr7:53922745..53922748,-: Difference between revisions
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{{FFCP|EntrezGene=21990|HGNC=|MCL_coexpression_id=46|UniProt=P17532|association_with_transcript=0bp_to_ENSMUST00000107669_5end|description=CAGE_peak_1_at_Tph1_5end|id=chr7:53922745..53922748,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.78e-11!43;UBERON:0005409!2.68e-10!59;UBERON:0000344!2.50e-08!15;UBERON:0001242!6.74e-07!13;UBERON:0000060!6.74e-07!13;UBERON:0001262!6.74e-07!13;UBERON:0004786!6.74e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.51e-25,31;UBERON:0005409,6.07e-22,47;UBERON:0000344,1.97e-12,15;UBERON:0004923,3.27e-11,24;UBERON:0001242,8.80e-10,13;UBERON:0001262,8.80e-10,13;UBERON:0004786,8.80e-10,13|phase1_expression=0,0.348975407639361,2.27499619694768,0.90739263392049,2.50447864973174,32.5685787509066,34.1074455269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,25.8156473122302,22.4631818659484,10.8794847499517,11.4704640533585,1.14846392823004,6.03066794622705,6.24866574789078,2.66032787238923,3.02436155711917,6.20845429834853,0,0,0,0,2.1610503896604,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.837548997004143,0,0,0,0,0,1.21161909333094,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.59857431606684,9.83963957859253,0.445326417194474,0,0,0,0,0.352766121407114,0,457.80508024406,1.01219549843938,0,0,0,0,7.45567044872489,0.292780797011547,0,10.4737392635522,0,0,0,0.149790639404823,0,0,0,0,0.83115217823824,0.324482526135515,2.13862664085664,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,2.43776516565517,1.23469281844766,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.210289948564127,0.205809224758569,38.3285788261206,6.34681359992506,0,0,0.128867461322093,2.42020229548011,2.2237804384487,3.04361001780095,9.96511029243474,8.07024878147653,4.77536896720512,5.37182474511107,7.21367122340745,4.49409704327111,15.561939590978,15.3338780405863,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,4.42587845717133,9.93372286697037,0,0,0,0.504941854408746,1.26203287766503,0,2.15423397732799,0.477937595905104,0.891194696329576,0.849229592366497,1.61924280669958,3.21481443702443,5.13874111330481,0,0.283880170416537,0.712262414669021,0.651547837414304,0.164970122972535,0,0,0,0.565815239267694,0.295301892880773,0.922305443831782,2.58428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,8.04961869282517,0.220528398054962,0.65954501176592,2.58343082713449,0.180938774784468,0,0,15.1570035047522,0,0,0.619160603889667,5.92622487583077,0,0,0,0,0,0.138199973804424,10.5013767981662,0,0,0.756037385752609,0,0.655087691238533,0,1.07449492442937,2.6175594198403,8.81381818384192,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.58678619322877,0,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,1.03936658382236,1.07416017400489,0.993406773906324,0.360586348559907,0.738447635872886,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0.481059208201647,0.233753804363138,0.453460767230423,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.486213434136588,0.419226325255965,0.919217542250071,1.11123363900808,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,1.32038438970253,0.561849044819294,0.576226371643824,0.631790158511746,0,0.463537303779422,0.38581844092741,0,0.588795680537589,1.02860775715625,1.06485483695602,0.715308569841963,0.726732083161643,0.846984423737976,0.676916863133412,0.365855945745545,0.789209134313529,0.814824683075171,0,0.237270036248348,0.591026894253381,0,0.77468420592983,1.15743966588685,0.499621155875892,0.467863216890817,1.50409737833809,2.67803664896381,0,0.695603506861264|short_description=p1@Tph1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21990 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=P17532 | |||
|association_with_transcript=0bp_to_ENSMUST00000107669_5end | |||
|cluster_id=chr7:53922745..53922748,- | |||
|description=CAGE_peak_1_at_Tph1_5end | |||
|id=chr7:53922745..53922748,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.78e-11!43;UBERON:0005409!2.68e-10!59;UBERON:0000344!2.50e-08!15;UBERON:0001242!6.74e-07!13;UBERON:0000060!6.74e-07!13;UBERON:0001262!6.74e-07!13;UBERON:0004786!6.74e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.51e-25,31;UBERON:0005409,6.07e-22,47;UBERON:0000344,1.97e-12,15;UBERON:0004923,3.27e-11,24;UBERON:0001242,8.80e-10,13;UBERON:0001262,8.80e-10,13;UBERON:0004786,8.80e-10,13 | |||
|phase1_expression=0,0.348975407639361,2.27499619694768,0.90739263392049,2.50447864973174,32.5685787509066,34.1074455269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,25.8156473122302,22.4631818659484,10.8794847499517,11.4704640533585,1.14846392823004,6.03066794622705,6.24866574789078,2.66032787238923,3.02436155711917,6.20845429834853,0,0,0,0,2.1610503896604,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.837548997004143,0,0,0,0,0,1.21161909333094,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.59857431606684,9.83963957859253,0.445326417194474,0,0,0,0,0.352766121407114,0,457.80508024406,1.01219549843938,0,0,0,0,7.45567044872489,0.292780797011547,0,10.4737392635522,0,0,0,0.149790639404823,0,0,0,0,0.83115217823824,0.324482526135515,2.13862664085664,0,0,0,0,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,2.43776516565517,1.23469281844766,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.210289948564127,0.205809224758569,38.3285788261206,6.34681359992506,0,0,0.128867461322093,2.42020229548011,2.2237804384487,3.04361001780095,9.96511029243474,8.07024878147653,4.77536896720512,5.37182474511107,7.21367122340745,4.49409704327111,15.561939590978,15.3338780405863,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,4.42587845717133,9.93372286697037,0,0,0,0.504941854408746,1.26203287766503,0,2.15423397732799,0.477937595905104,0.891194696329576,0.849229592366497,1.61924280669958,3.21481443702443,5.13874111330481,0,0.283880170416537,0.712262414669021,0.651547837414304,0.164970122972535,0,0,0,0.565815239267694,0.295301892880773,0.922305443831782,2.58428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,8.04961869282517,0.220528398054962,0.65954501176592,2.58343082713449,0.180938774784468,0,0,15.1570035047522,0,0,0.619160603889667,5.92622487583077,0,0,0,0,0,0.138199973804424,10.5013767981662,0,0,0.756037385752609,0,0.655087691238533,0,1.07449492442937,2.6175594198403,8.81381818384192,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.58678619322877,0,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,1.03936658382236,1.07416017400489,0.993406773906324,0.360586348559907,0.738447635872886,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0.481059208201647,0.233753804363138,0.453460767230423,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.486213434136588,0.419226325255965,0.919217542250071,1.11123363900808,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,1.32038438970253,0.561849044819294,0.576226371643824,0.631790158511746,0,0.463537303779422,0.38581844092741,0,0.588795680537589,1.02860775715625,1.06485483695602,0.715308569841963,0.726732083161643,0.846984423737976,0.676916863133412,0.365855945745545,0.789209134313529,0.814824683075171,0,0.237270036248348,0.591026894253381,0,0.77468420592983,1.15743966588685,0.499621155875892,0.467863216890817,1.50409737833809,2.67803664896381,0,0.695603506861264 | |||
|short_description=p1@Tph1 | |||
}} |
Latest revision as of 22:25, 26 September 2015
Short description: | p1@Tph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000107669_5end |
EntrezGene: | Tph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.51e-25 | 31 |
gastrointestinal system | 6.07e-22 | 47 |
mucosa | 1.97e-12 | 15 |
organ component layer | 3.27e-11 | 24 |
intestinal mucosa | 8.80e-10 | 13 |
wall of intestine | 8.80e-10 | 13 |
gastrointestinal system mucosa | 8.80e-10 | 13 |