FFCP PHASE1:Mm9::chr7:29382208..29382215,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:29382208..29382215,+|id=chr7:29382208..29382215,+|ontology_enrichment_celltype=CL:0002563!1.58e-21!9;CL:0002251!1.58e-21!9;CL:0000066!1.93e-16!25;CL:0000239!7.21e-15!6;CL:0000677!7.21e-15!6;CL:0000212!7.21e-15!6;CL:0000584!7.21e-15!6;CL:0000223!5.69e-13!20;CL:0000075!1.29e-12!7;CL:0002076!4.06e-12!15;CL:0002250!3.13e-08!3;CL:0000473!6.91e-08!3;CL:0000627!6.91e-08!3;CL:0000682!6.91e-08!3|ontology_enrichment_celltype_v019_2=CL:0002563,5.06e-44,9;CL:0002251,5.06e-44,9;CL:0000239,8.72e-30,6;CL:0000677,8.72e-30,6;CL:0000584,8.72e-30,6;CL:0002076,1.52e-26,15;CL:0000075,1.28e-25,7;CL:0000066,1.57e-21,25;CL:0000223,5.73e-20,20;CL:0002250,1.04e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.58e-21!9;UBERON:0004808!1.58e-21!9;UBERON:0001277!1.58e-21!9;UBERON:0000344!2.28e-21!15;UBERON:0001242!3.68e-21!13;UBERON:0000060!3.68e-21!13;UBERON:0001262!3.68e-21!13;UBERON:0004786!3.68e-21!13;UBERON:0005409!1.40e-19!59;UBERON:0000160!1.29e-18!43;UBERON:0000485!3.01e-17!11;UBERON:0004923!1.89e-14!24;UBERON:0001007!7.96e-10!128;UBERON:0001555!7.96e-10!128;UBERON:0007026!7.96e-10!128;UBERON:0004119!1.45e-09!130;UBERON:0000925!1.45e-09!130;UBERON:0006595!1.45e-09!130;UBERON:0004921!3.69e-09!126;UBERON:0004185!3.69e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.06e-44,9;UBERON:0004808,5.06e-44,9;UBERON:0001277,5.06e-44,9;UBERON:0000485,4.38e-36,11;UBERON:0001242,1.39e-30,13;UBERON:0001262,1.39e-30,13;UBERON:0004786,1.39e-30,13;UBERON:0000344,1.52e-26,15;UBERON:0004923,1.14e-16,24;UBERON:0000160,6.17e-13,31;UBERON:0005409,1.51e-08,47;UBERON:0003929,2.66e-07,55|phase1_expression=0,2.44282785347553,0.909998478779072,2.41971369045464,4.50806156951712,0.671517087647559,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,1.72269589234506,0.86152399231815,0.646413698057667,0,0,0.665191531965914,0,0,0,1.73310971850765,0.831173226792462,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:29382208..29382215,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:29382208..29382215,+ | |||
|description=CAGE_peak_at_chr7:29382208..29382215,+ | |||
|id=chr7:29382208..29382215,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.58e-21!9;CL:0002251!1.58e-21!9;CL:0000066!1.93e-16!25;CL:0000239!7.21e-15!6;CL:0000677!7.21e-15!6;CL:0000212!7.21e-15!6;CL:0000584!7.21e-15!6;CL:0000223!5.69e-13!20;CL:0000075!1.29e-12!7;CL:0002076!4.06e-12!15;CL:0002250!3.13e-08!3;CL:0000473!6.91e-08!3;CL:0000627!6.91e-08!3;CL:0000682!6.91e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.06e-44,9;CL:0002251,5.06e-44,9;CL:0000239,8.72e-30,6;CL:0000677,8.72e-30,6;CL:0000584,8.72e-30,6;CL:0002076,1.52e-26,15;CL:0000075,1.28e-25,7;CL:0000066,1.57e-21,25;CL:0000223,5.73e-20,20;CL:0002250,1.04e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.58e-21!9;UBERON:0004808!1.58e-21!9;UBERON:0001277!1.58e-21!9;UBERON:0000344!2.28e-21!15;UBERON:0001242!3.68e-21!13;UBERON:0000060!3.68e-21!13;UBERON:0001262!3.68e-21!13;UBERON:0004786!3.68e-21!13;UBERON:0005409!1.40e-19!59;UBERON:0000160!1.29e-18!43;UBERON:0000485!3.01e-17!11;UBERON:0004923!1.89e-14!24;UBERON:0001007!7.96e-10!128;UBERON:0001555!7.96e-10!128;UBERON:0007026!7.96e-10!128;UBERON:0004119!1.45e-09!130;UBERON:0000925!1.45e-09!130;UBERON:0006595!1.45e-09!130;UBERON:0004921!3.69e-09!126;UBERON:0004185!3.69e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.06e-44,9;UBERON:0004808,5.06e-44,9;UBERON:0001277,5.06e-44,9;UBERON:0000485,4.38e-36,11;UBERON:0001242,1.39e-30,13;UBERON:0001262,1.39e-30,13;UBERON:0004786,1.39e-30,13;UBERON:0000344,1.52e-26,15;UBERON:0004923,1.14e-16,24;UBERON:0000160,6.17e-13,31;UBERON:0005409,1.51e-08,47;UBERON:0003929,2.66e-07,55 | |||
|phase1_expression=0,2.44282785347553,0.909998478779072,2.41971369045464,4.50806156951712,0.671517087647559,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,1.72269589234506,0.86152399231815,0.646413698057667,0,0,0.665191531965914,0,0,0,1.73310971850765,0.831173226792462,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:29382208..29382215,+ | |||
}} |
Latest revision as of 23:13, 4 August 2015
Short description: | p@chr7:29382208..29382215, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29382208..29382215, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.06e-44 | 9 |
epithelial cell of alimentary canal | 5.06e-44 | 9 |
brush border epithelial cell | 8.72e-30 | 6 |
gut absorptive cell | 8.72e-30 | 6 |
enterocyte | 8.72e-30 | 6 |
endo-epithelial cell | 1.52e-26 | 15 |
columnar/cuboidal epithelial cell | 1.28e-25 | 7 |
epithelial cell | 1.57e-21 | 25 |
endodermal cell | 5.73e-20 | 20 |
intestinal crypt stem cell | 1.04e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.06e-44 | 9 |
gastrointestinal system epithelium | 5.06e-44 | 9 |
intestinal epithelium | 5.06e-44 | 9 |
simple columnar epithelium | 4.38e-36 | 11 |
intestinal mucosa | 1.39e-30 | 13 |
wall of intestine | 1.39e-30 | 13 |
gastrointestinal system mucosa | 1.39e-30 | 13 |
mucosa | 1.52e-26 | 15 |
organ component layer | 1.14e-16 | 24 |
intestine | 6.17e-13 | 31 |
gastrointestinal system | 1.51e-08 | 47 |
gut epithelium | 2.66e-07 | 55 |