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FFCP PHASE1:Mm9::chr7:26472296..26472360,+: Difference between revisions

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{{FFCP|EntrezGene=21803|HGNC=|MCL_coexpression_id=2223|UniProt=P04202,Q3UNK5|association_with_transcript=275bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end|description=CAGE_peak_2_at_Tgfb1_5end|id=chr7:26472296..26472360,+|ontology_enrichment_celltype=CL:0000988!1.20e-15!32;CL:0002032!1.20e-15!32;CL:0000037!1.20e-15!32;CL:0000566!1.20e-15!32;CL:0000837!1.20e-15!32;CL:0002320!1.28e-14!46;CL:0000134!1.28e-14!46;CL:0002031!3.08e-13!25;CL:0000219!1.42e-10!54;CL:0000049!1.54e-10!19;CL:0000763!8.08e-09!16;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0000839!2.46e-07!13;CL:0000838!3.22e-07!12;CL:0000791!7.66e-07!9;CL:0000789!7.66e-07!9;CL:0002420!7.66e-07!9;CL:0002419!7.66e-07!9;CL:0000790!7.66e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,9.34e-16,32;CL:0002032,9.34e-16,32;CL:0000037,9.34e-16,32;CL:0000837,9.34e-16,32;CL:0002320,4.04e-15,46;CL:0000134,4.04e-15,46;CL:0002031,2.50e-13,25;CL:0000219,3.43e-11,54;CL:0000049,1.31e-10,19;CL:0000763,7.10e-09,16;CL:0000738,2.93e-08,17;CL:0002087,2.93e-08,17;CL:0000839,2.21e-07,13;CL:0000838,2.90e-07,12;CL:0000791,6.96e-07,9;CL:0000789,6.96e-07,9;CL:0002420,6.96e-07,9;CL:0002419,6.96e-07,9;CL:0000790,6.96e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.90e-17!88;UBERON:0002390!7.76e-16!45;UBERON:0003061!7.76e-16!45;UBERON:0002384!1.28e-14!46;UBERON:0002193!1.68e-14!48;UBERON:0002405!2.34e-14!70;UBERON:0000926!1.73e-12!193;UBERON:0004120!1.73e-12!193;UBERON:0006603!1.73e-12!193;UBERON:0002371!3.53e-09!16;UBERON:0001474!7.98e-09!22;UBERON:0004765!7.98e-09!22;UBERON:0001434!7.98e-09!22;UBERON:0005057!4.63e-08!51;UBERON:0004177!4.91e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.49e-16,87;UBERON:0002390,6.01e-16,45;UBERON:0003061,6.01e-16,45;UBERON:0002384,4.04e-15,46;UBERON:0002193,1.44e-14,48;UBERON:0002405,1.44e-14,48;UBERON:0000926,3.60e-12,120;UBERON:0004120,3.60e-12,120;UBERON:0006603,3.60e-12,120;UBERON:0002371,3.08e-09,16;UBERON:0000077,7.44e-09,35;UBERON:0001474,8.03e-09,22;UBERON:0004765,8.03e-09,22;UBERON:0001434,8.03e-09,22;UBERON:0004177,4.37e-08,29;UBERON:0005057,4.37e-08,29;UBERON:0001041,1.48e-07,80|phase1_expression=0.80074423552397,0,0,0,0,0.671517087647559,0,27.5032678930557,133.46770859978,149.567232319754,65.5764818303684,52.649624936922,13.0112554747716,11.8891747289836,8.32774404539157,5.87178275430495,7.69518065940961,11.6721001182548,15.219702130237,15.7024171165271,3.74190476664707,5.16312946244604,3.91799683708403,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.665191531965914,24.7661962649256,8.61090702618398,95.0890086092632,0,0,0,1.25559489221072,2.3440060335714,3.66466620781659,4.1176204162171,3.41522742479223,6.311634589405,2.26614272356039,1.82478476195126,0.550640256485045,8.60630478782843,0,0.439372365468944,0.388859798148567,1.95980990275508,0,26.6774343631801,27.5637613964311,10.4189077734164,8.7468208252222,7.73640287834643,11.8604581223812,0.809265843438391,0.528990979272033,0.633831403506179,3.38844532069132,3.55717918444456,66.1426292201828,119.652829870604,69.6270512647178,15.2796056364386,7.30014780110954,0.933206510776299,0.945041568321835,0.841299845405528,0.571301968807607,0.662605622854841,0.61245399607477,1.15014565221884,1.83843757322004,1.10115880999389,0.127687338085188,0.307213066512487,0.923204014111357,1.00636407962651,2.08365348222704,1.95428099300967,0,0.763991238884051,2.65165726926301,0.711858403995515,0.745597783301202,2.80186915332781,3.47629176491213,16.5222758559956,10.3250865237766,0,0,2.59910566979068,0,2.66844398250329,7.32850387085648,4.1565760736459,6.71345191569646,0.281686839553361,1.28326477414318,5.09610479413291,21.3320010945999,2.16491041011214,4.30711771307668,4.04419556011827,2.51204535381932,25.1169747137757,4.00793775475027,2.77576522825817,3.65358573974569,1.38369298353635,3.3158980921577,2.93971767839262,2.01066546127481,8.40462890296871,5.92857363371638,23.8844849026466,11.3236794963186,10.3795513676385,11.6370060752453,5.59175283654366,0.878342391034642,0.41889341362691,1.53274233125155,24.6819156482196,16.197373736822,18.0439722443752,0.149790639404823,0.915001205637253,0.125654352112864,0.521472960576829,0.767146371990992,1.0389402227978,0.648965052271031,2.13862664085664,10.9478134136882,17.6905930903572,2.94618598241064,1.56144531555244,0.459804208866946,1.44049703844279,1.65775299619287,1.08858398642125,1.15302348256365,0.843315521037559,3.10444044886819,1.72454394346274,0.945530400839096,0.703804496655795,3.06874025398605,2.50242524303038,6.268538997399,4.93877127379064,5.17489093728082,15.4486901208912,15.4408744268829,10.2298859782413,3.72826390563903,5.62862543954631,3.42117916775928,6.39210786080068,4.52557733019029,3.70241070929708,5.58081467400979,5.09719462659276,3.97002164048376,3.29119699826961,3.11918181750281,2.67527071501324,2.77779976108131,4.17145219052996,2.41571553768669,1.26173969138476,1.3377599609307,0.991256348951394,0.528901133327089,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21803
|HGNC=
|MCL_coexpression_id=2223
|TSSclassifier=NA
|UniProt=P04202,Q3UNK5
|association_with_transcript=275bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end
|cluster_id=chr7:26472296..26472360,+
|description=CAGE_peak_2_at_Tgfb1_5end
|id=chr7:26472296..26472360,+
|ontology_enrichment_celltype=CL:0000988!1.20e-15!32;CL:0002032!1.20e-15!32;CL:0000037!1.20e-15!32;CL:0000566!1.20e-15!32;CL:0000837!1.20e-15!32;CL:0002320!1.28e-14!46;CL:0000134!1.28e-14!46;CL:0002031!3.08e-13!25;CL:0000219!1.42e-10!54;CL:0000049!1.54e-10!19;CL:0000763!8.08e-09!16;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0000839!2.46e-07!13;CL:0000838!3.22e-07!12;CL:0000791!7.66e-07!9;CL:0000789!7.66e-07!9;CL:0002420!7.66e-07!9;CL:0002419!7.66e-07!9;CL:0000790!7.66e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,9.34e-16,32;CL:0002032,9.34e-16,32;CL:0000037,9.34e-16,32;CL:0000837,9.34e-16,32;CL:0002320,4.04e-15,46;CL:0000134,4.04e-15,46;CL:0002031,2.50e-13,25;CL:0000219,3.43e-11,54;CL:0000049,1.31e-10,19;CL:0000763,7.10e-09,16;CL:0000738,2.93e-08,17;CL:0002087,2.93e-08,17;CL:0000839,2.21e-07,13;CL:0000838,2.90e-07,12;CL:0000791,6.96e-07,9;CL:0000789,6.96e-07,9;CL:0002420,6.96e-07,9;CL:0002419,6.96e-07,9;CL:0000790,6.96e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!2.90e-17!88;UBERON:0002390!7.76e-16!45;UBERON:0003061!7.76e-16!45;UBERON:0002384!1.28e-14!46;UBERON:0002193!1.68e-14!48;UBERON:0002405!2.34e-14!70;UBERON:0000926!1.73e-12!193;UBERON:0004120!1.73e-12!193;UBERON:0006603!1.73e-12!193;UBERON:0002371!3.53e-09!16;UBERON:0001474!7.98e-09!22;UBERON:0004765!7.98e-09!22;UBERON:0001434!7.98e-09!22;UBERON:0005057!4.63e-08!51;UBERON:0004177!4.91e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.49e-16,87;UBERON:0002390,6.01e-16,45;UBERON:0003061,6.01e-16,45;UBERON:0002384,4.04e-15,46;UBERON:0002193,1.44e-14,48;UBERON:0002405,1.44e-14,48;UBERON:0000926,3.60e-12,120;UBERON:0004120,3.60e-12,120;UBERON:0006603,3.60e-12,120;UBERON:0002371,3.08e-09,16;UBERON:0000077,7.44e-09,35;UBERON:0001474,8.03e-09,22;UBERON:0004765,8.03e-09,22;UBERON:0001434,8.03e-09,22;UBERON:0004177,4.37e-08,29;UBERON:0005057,4.37e-08,29;UBERON:0001041,1.48e-07,80
|phase1_expression=0.80074423552397,0,0,0,0,0.671517087647559,0,27.5032678930557,133.46770859978,149.567232319754,65.5764818303684,52.649624936922,13.0112554747716,11.8891747289836,8.32774404539157,5.87178275430495,7.69518065940961,11.6721001182548,15.219702130237,15.7024171165271,3.74190476664707,5.16312946244604,3.91799683708403,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.665191531965914,24.7661962649256,8.61090702618398,95.0890086092632,0,0,0,1.25559489221072,2.3440060335714,3.66466620781659,4.1176204162171,3.41522742479223,6.311634589405,2.26614272356039,1.82478476195126,0.550640256485045,8.60630478782843,0,0.439372365468944,0.388859798148567,1.95980990275508,0,26.6774343631801,27.5637613964311,10.4189077734164,8.7468208252222,7.73640287834643,11.8604581223812,0.809265843438391,0.528990979272033,0.633831403506179,3.38844532069132,3.55717918444456,66.1426292201828,119.652829870604,69.6270512647178,15.2796056364386,7.30014780110954,0.933206510776299,0.945041568321835,0.841299845405528,0.571301968807607,0.662605622854841,0.61245399607477,1.15014565221884,1.83843757322004,1.10115880999389,0.127687338085188,0.307213066512487,0.923204014111357,1.00636407962651,2.08365348222704,1.95428099300967,0,0.763991238884051,2.65165726926301,0.711858403995515,0.745597783301202,2.80186915332781,3.47629176491213,16.5222758559956,10.3250865237766,0,0,2.59910566979068,0,2.66844398250329,7.32850387085648,4.1565760736459,6.71345191569646,0.281686839553361,1.28326477414318,5.09610479413291,21.3320010945999,2.16491041011214,4.30711771307668,4.04419556011827,2.51204535381932,25.1169747137757,4.00793775475027,2.77576522825817,3.65358573974569,1.38369298353635,3.3158980921577,2.93971767839262,2.01066546127481,8.40462890296871,5.92857363371638,23.8844849026466,11.3236794963186,10.3795513676385,11.6370060752453,5.59175283654366,0.878342391034642,0.41889341362691,1.53274233125155,24.6819156482196,16.197373736822,18.0439722443752,0.149790639404823,0.915001205637253,0.125654352112864,0.521472960576829,0.767146371990992,1.0389402227978,0.648965052271031,2.13862664085664,10.9478134136882,17.6905930903572,2.94618598241064,1.56144531555244,0.459804208866946,1.44049703844279,1.65775299619287,1.08858398642125,1.15302348256365,0.843315521037559,3.10444044886819,1.72454394346274,0.945530400839096,0.703804496655795,3.06874025398605,2.50242524303038,6.268538997399,4.93877127379064,5.17489093728082,15.4486901208912,15.4408744268829,10.2298859782413,3.72826390563903,5.62862543954631,3.42117916775928,6.39210786080068,4.52557733019029,3.70241070929708,5.58081467400979,5.09719462659276,3.97002164048376,3.29119699826961,3.11918181750281,2.67527071501324,2.77779976108131,4.17145219052996,2.41571553768669,1.26173969138476,1.3377599609307,0.991256348951394,0.528901133327089,1.49301775374664,1.85789337488351,1.9330119198314,2.62188582010345,2.66853652613844,1.71203063501303,2.37264530772256,2.14108641141214,1.75934646160189,2.38747766449381,2.53453313254856,2.69645822596266,0.432276099749388,1.1948476395262,4.1726938209678,2.62771579002376,4.50830942692322,2.8511185898344,2.71533482034676,2.45475369616115,3.73095569033118,2.65698266363284,3.767969468193,1.97435462274881,1.48226313543574,4.83850806576673,5.30709286805648,4.94696647246678,6.08580364165509,4.3411888755435,4.83789118384698,6.61701116136864,7.94462611197673,4.94210543738547,14.3768206527355,6.32639611036456,5.92871578917665,5.30415643688935,2.69096120282868,2.8946611281802,4.98833613449833,0.947457058852424,3.25929952884052,2.54617628662782,1.87752198630802,3.68513766371995,5.47500374037832,7.02481132288076,6.62067605246002,5.75808193086815,4.14582398509466,6.71839590334526,6.56202931090403,6.50920763616802,19.6028669121054,15.2293591469239,6.88469982226651,5.79467167239938,0.642202359951168,0.35163505977661,0.327869890753351,1.76729649043061,1.89304931649754,1.17131623288992,2.15423397732799,0.716906393857656,0.891194696329576,4.24614796183249,1.61924280669958,4.09158201075837,3.16230222357219,0.963963949265421,4.11626247103979,1.95872164033981,1.30309567482861,2.63952196756057,3.98235415019888,2.18502572539483,1.51161778482376,1.32023555829129,3.83892460745005,2.45948118355142,2.58428293168221,2.54473610634254,1.42598951353889,2.21225730555071,1.05418608574999,0,0.340439605753788,1.62054984628179,4.2688365648309,2.14337035031592,3.19212420556092,4.99432689285798,4.11372551505302,3.65357938937519,9.1521966144847,7.83778662196135,0.441056796109924,6.76033637060068,5.00539722757307,2.65376869683886,1.67121281604391,2.62625439592098,3.49777003955821,0.370850604021019,10.2522528478712,8.87463532241857,9.4449208958553,10.360265135258,8.61173634642459,9.37990510146743,44.8743055183778,45.7641249098362,44.6385915388289,4.77335309007557,1.10717597753397,3.04979200690273,2.26811215725783,3.13632444021703,2.40198820120795,2.42755823492677,3.63675205191478,1.57053565190418,1.68499465279331,4.97071450469541,5.6369293868419,2.69129782879162,3.30916980914195,2.72231663681667,1.93739735216597,2.87225413334323,1.17357238645754,2.47388331203505,2.09718688851422,5.79801889982414,4.60848010012585,10.4283669807299,2.8381530140623,2.97861775777999,3.76770386635606,4.29664069601955,5.16571522431289,7.3319224207181,5.1691334511102,4.74542314756294,3.96275394605999,4.43635214602098,7.40679893622118,6.5424052315424,3.97381467417334,3.85441652145859,8.87943813496259,9.41995494399495,18.1315385673205,5.9888774149979,10.5102186252662,2.74727436400898,4.93047271881851,2.00628841614145,0,0,0,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.93408612825759,1.99512436700516,1.87806966329548,3.16038732188782,4.40187641518763,4.04455718590031,3.33370091702423,5.15087643097235,4.1719497246936,5.05394423527595,3.8021894983536,5.09291121742406,4.68207537349412,5.12201219238954,3.10151532360312,5.71552429539688,4.28772005995965,2.70072908649187,3.70877310722976,4.26876868389752,3.77156177623957,3.01708870470874,4.5302876089991,3.48831399917588,3.01150017329058,3.80765735512544,4.024415403201,4.73525480588117,2.8518863907631,2.80571135828869,3.79632057997357,3.94017929502254,2.04615521584845,2.78886314134739,5.01557188550968,6.49507502638659,3.50897412668113,5.58664740525576,8.60797494309795,6.83833399270498,6.72416723299222
|short_description=p2@Tgfb1
}}

Latest revision as of 10:53, 26 September 2015

Short description:p2@Tgfb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tgfb1_5end
Coexpression cluster:MCL_coexpression_mm9:2223
Association with transcript: 275bp_to_ENSMUST00000002678, NM_011577, uc009ftq.1_5end
EntrezGene:Tgfb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tgfb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7133.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2149.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E665.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F152.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.01
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.22
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A226.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C766.14
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7119.65
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D269.63
Mouse Microglia, donor1.CNhs12629.11718-123C815.28
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H925.12
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.04
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B217.69
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E55.58
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D53.73
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A46.72
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G210.25
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C644.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D344.64
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D33.96
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.13
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lateral plate mesoderm1.49e-1687
hematopoietic system6.01e-1645
blood island6.01e-1645
connective tissue4.04e-1546
hemolymphoid system1.44e-1448
immune system1.44e-1448
mesoderm3.60e-12120
mesoderm-derived structure3.60e-12120
presumptive mesoderm3.60e-12120
bone marrow3.08e-0916
mixed endoderm/mesoderm-derived structure7.44e-0935
bone element8.03e-0922
skeletal element8.03e-0922
skeletal system8.03e-0922
hemopoietic organ4.37e-0829
immune organ4.37e-0829
foregut1.48e-0780
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