FFCP PHASE1:Mm9::chr7:149135757..149135773,+: Difference between revisions
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{{FFCP|EntrezGene=75770|HGNC=|MCL_coexpression_id=1|UniProt=G3UWV4|association_with_transcript=6bp_to_ENSMUST00000172652_5end|description=CAGE_peak_3_at_Brsk2_5end|id=chr7:149135757..149135773,+|ontology_enrichment_celltype=CL:0000117!6.89e-18!23;CL:0000337!6.89e-18!23;CL:0000540!2.46e-17!33;CL:0000047!2.46e-17!33;CL:0000031!2.46e-17!33;CL:0000404!2.46e-17!33;CL:0000393!6.59e-13!39;CL:0000211!6.59e-13!39;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0002319!3.27e-12!43;CL:0000055!5.60e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.97e-33,23;CL:0000337,8.97e-33,23;CL:0000540,5.99e-21,33;CL:0000047,5.99e-21,33;CL:0000031,5.99e-21,33;CL:0000404,5.99e-21,33;CL:0000393,8.70e-17,39;CL:0000211,8.70e-17,39;CL:0002319,1.15e-14,43;CL:0000221,3.37e-14,44;CL:0000133,3.37e-14,44;CL:0002609,2.96e-08,6;CL:0002321,7.66e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.43e-35!73;UBERON:0005743!7.43e-35!73;UBERON:0000073!2.38e-34!75;UBERON:0001016!2.38e-34!75;UBERON:0001049!1.62e-31!52;UBERON:0005068!1.62e-31!52;UBERON:0006241!1.62e-31!52;UBERON:0007135!1.62e-31!52;UBERON:0002346!3.25e-31!71;UBERON:0003075!3.25e-31!71;UBERON:0007284!3.25e-31!71;UBERON:0000033!7.79e-31!63;UBERON:0000955!1.56e-29!50;UBERON:0006238!1.56e-29!50;UBERON:0002616!8.88e-29!49;UBERON:0004121!1.27e-28!102;UBERON:0000924!1.27e-28!102;UBERON:0006601!1.27e-28!102;UBERON:0003056!2.57e-25!49;UBERON:0002020!4.61e-24!34;UBERON:0003080!1.85e-23!40;UBERON:0002780!1.16e-22!39;UBERON:0001890!1.16e-22!39;UBERON:0006240!1.16e-22!39;UBERON:0002791!1.05e-19!29;UBERON:0003528!1.05e-19!29;UBERON:0001893!1.05e-19!29;UBERON:0007811!6.05e-17!86;UBERON:0000153!7.74e-14!94;UBERON:0000956!8.26e-14!21;UBERON:0001869!8.26e-14!21;UBERON:0000203!8.26e-14!21;UBERON:0002619!4.65e-11!17;UBERON:0002021!6.30e-10!10;UBERON:0000411!6.30e-10!10;UBERON:0001950!6.30e-10!10;UBERON:0003076!2.41e-08!12;UBERON:0003057!2.41e-08!12;UBERON:0002420!4.18e-07!8;UBERON:0007245!4.18e-07!8;UBERON:0010009!4.18e-07!8;UBERON:0010011!4.18e-07!8;UBERON:0000454!4.18e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.33e-49,54;UBERON:0002020,7.63e-46,34;UBERON:0001049,1.38e-45,52;UBERON:0005068,1.38e-45,52;UBERON:0006241,1.38e-45,52;UBERON:0007135,1.38e-45,52;UBERON:0001017,3.92e-44,73;UBERON:0001016,1.17e-42,75;UBERON:0002346,2.24e-41,64;UBERON:0003075,2.24e-41,64;UBERON:0007284,2.24e-41,64;UBERON:0003528,1.99e-37,29;UBERON:0002791,1.99e-37,29;UBERON:0001893,1.99e-37,29;UBERON:0000955,2.15e-37,47;UBERON:0006238,2.15e-37,47;UBERON:0004121,2.16e-36,95;UBERON:0000924,2.16e-36,95;UBERON:0006601,2.16e-36,95;UBERON:0002616,4.58e-36,46;UBERON:0010371,5.91e-35,73;UBERON:0003080,7.51e-32,40;UBERON:0002780,1.95e-30,39;UBERON:0001890,1.95e-30,39;UBERON:0006240,1.95e-30,39;UBERON:0003056,2.25e-30,49;UBERON:0000956,4.56e-26,21;UBERON:0001869,4.56e-26,21;UBERON:0000203,4.56e-26,21;UBERON:0010314,1.59e-25,92;UBERON:0002619,8.89e-21,17;UBERON:0002021,1.59e-17,10;UBERON:0000411,1.59e-17,10;UBERON:0001950,1.59e-17,10;UBERON:0000025,3.10e-15,114;UBERON:0004111,1.41e-13,122;UBERON:0003076,1.86e-13,12;UBERON:0003057,1.86e-13,12;UBERON:0002420,3.75e-12,8;UBERON:0007245,3.75e-12,8;UBERON:0010009,3.75e-12,8;UBERON:0010011,3.75e-12,8;UBERON:0000454,3.75e-12,8;UBERON:0002240,1.64e-10,6;UBERON:0005174,1.64e-10,6;UBERON:0001137,1.64e-10,6;UBERON:0011216,1.42e-09,194;UBERON:0001948,2.87e-09,5;UBERON:0002315,2.87e-09,5;UBERON:0000369,9.68e-09,5;UBERON:0002435,9.68e-09,5;UBERON:0000204,9.68e-09,5;UBERON:0010082,9.68e-09,5;UBERON:0000483,1.63e-08,174;UBERON:0000119,2.66e-08,176|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,1.97010263386108,1.75507719831198,1.26194976810829,3.99911378165325,2.87129103237098,1.46988959057945,1.43768206527355,1.83843757322004,4.40463523997555,3.06449611404451,2.91852413186863,2.76961204233407,2.92760459527711,1.56274011167028,2.79182999001381,1.12552522006336,1.68078072554491,3.83017161115768,3.41692033917847,3.72798891650601,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.80615036115011,6.0739544975902,0,0,0,0,3.14560342750128,5.49000723382352,4.14659361972453,4.86708096538374,5.62574006126727,3.53239675751252,1.78465389374533,0,0,0,0.631325567659422,0.130120442962704,0,0,0.30140963567143,0.884474488967262,1.0249097622788,2.06143794031403,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0.63101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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75770 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=G3UWV4 | |||
|association_with_transcript=6bp_to_ENSMUST00000172652_5end | |||
|cluster_id=chr7:149135757..149135773,+ | |||
|description=CAGE_peak_3_at_Brsk2_5end | |||
|id=chr7:149135757..149135773,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.89e-18!23;CL:0000337!6.89e-18!23;CL:0000540!2.46e-17!33;CL:0000047!2.46e-17!33;CL:0000031!2.46e-17!33;CL:0000404!2.46e-17!33;CL:0000393!6.59e-13!39;CL:0000211!6.59e-13!39;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0002319!3.27e-12!43;CL:0000055!5.60e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.97e-33,23;CL:0000337,8.97e-33,23;CL:0000540,5.99e-21,33;CL:0000047,5.99e-21,33;CL:0000031,5.99e-21,33;CL:0000404,5.99e-21,33;CL:0000393,8.70e-17,39;CL:0000211,8.70e-17,39;CL:0002319,1.15e-14,43;CL:0000221,3.37e-14,44;CL:0000133,3.37e-14,44;CL:0002609,2.96e-08,6;CL:0002321,7.66e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.43e-35!73;UBERON:0005743!7.43e-35!73;UBERON:0000073!2.38e-34!75;UBERON:0001016!2.38e-34!75;UBERON:0001049!1.62e-31!52;UBERON:0005068!1.62e-31!52;UBERON:0006241!1.62e-31!52;UBERON:0007135!1.62e-31!52;UBERON:0002346!3.25e-31!71;UBERON:0003075!3.25e-31!71;UBERON:0007284!3.25e-31!71;UBERON:0000033!7.79e-31!63;UBERON:0000955!1.56e-29!50;UBERON:0006238!1.56e-29!50;UBERON:0002616!8.88e-29!49;UBERON:0004121!1.27e-28!102;UBERON:0000924!1.27e-28!102;UBERON:0006601!1.27e-28!102;UBERON:0003056!2.57e-25!49;UBERON:0002020!4.61e-24!34;UBERON:0003080!1.85e-23!40;UBERON:0002780!1.16e-22!39;UBERON:0001890!1.16e-22!39;UBERON:0006240!1.16e-22!39;UBERON:0002791!1.05e-19!29;UBERON:0003528!1.05e-19!29;UBERON:0001893!1.05e-19!29;UBERON:0007811!6.05e-17!86;UBERON:0000153!7.74e-14!94;UBERON:0000956!8.26e-14!21;UBERON:0001869!8.26e-14!21;UBERON:0000203!8.26e-14!21;UBERON:0002619!4.65e-11!17;UBERON:0002021!6.30e-10!10;UBERON:0000411!6.30e-10!10;UBERON:0001950!6.30e-10!10;UBERON:0003076!2.41e-08!12;UBERON:0003057!2.41e-08!12;UBERON:0002420!4.18e-07!8;UBERON:0007245!4.18e-07!8;UBERON:0010009!4.18e-07!8;UBERON:0010011!4.18e-07!8;UBERON:0000454!4.18e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.33e-49,54;UBERON:0002020,7.63e-46,34;UBERON:0001049,1.38e-45,52;UBERON:0005068,1.38e-45,52;UBERON:0006241,1.38e-45,52;UBERON:0007135,1.38e-45,52;UBERON:0001017,3.92e-44,73;UBERON:0001016,1.17e-42,75;UBERON:0002346,2.24e-41,64;UBERON:0003075,2.24e-41,64;UBERON:0007284,2.24e-41,64;UBERON:0003528,1.99e-37,29;UBERON:0002791,1.99e-37,29;UBERON:0001893,1.99e-37,29;UBERON:0000955,2.15e-37,47;UBERON:0006238,2.15e-37,47;UBERON:0004121,2.16e-36,95;UBERON:0000924,2.16e-36,95;UBERON:0006601,2.16e-36,95;UBERON:0002616,4.58e-36,46;UBERON:0010371,5.91e-35,73;UBERON:0003080,7.51e-32,40;UBERON:0002780,1.95e-30,39;UBERON:0001890,1.95e-30,39;UBERON:0006240,1.95e-30,39;UBERON:0003056,2.25e-30,49;UBERON:0000956,4.56e-26,21;UBERON:0001869,4.56e-26,21;UBERON:0000203,4.56e-26,21;UBERON:0010314,1.59e-25,92;UBERON:0002619,8.89e-21,17;UBERON:0002021,1.59e-17,10;UBERON:0000411,1.59e-17,10;UBERON:0001950,1.59e-17,10;UBERON:0000025,3.10e-15,114;UBERON:0004111,1.41e-13,122;UBERON:0003076,1.86e-13,12;UBERON:0003057,1.86e-13,12;UBERON:0002420,3.75e-12,8;UBERON:0007245,3.75e-12,8;UBERON:0010009,3.75e-12,8;UBERON:0010011,3.75e-12,8;UBERON:0000454,3.75e-12,8;UBERON:0002240,1.64e-10,6;UBERON:0005174,1.64e-10,6;UBERON:0001137,1.64e-10,6;UBERON:0011216,1.42e-09,194;UBERON:0001948,2.87e-09,5;UBERON:0002315,2.87e-09,5;UBERON:0000369,9.68e-09,5;UBERON:0002435,9.68e-09,5;UBERON:0000204,9.68e-09,5;UBERON:0010082,9.68e-09,5;UBERON:0000483,1.63e-08,174;UBERON:0000119,2.66e-08,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,1.97010263386108,1.75507719831198,1.26194976810829,3.99911378165325,2.87129103237098,1.46988959057945,1.43768206527355,1.83843757322004,4.40463523997555,3.06449611404451,2.91852413186863,2.76961204233407,2.92760459527711,1.56274011167028,2.79182999001381,1.12552522006336,1.68078072554491,3.83017161115768,3.41692033917847,3.72798891650601,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.80615036115011,6.0739544975902,0,0,0,0,3.14560342750128,5.49000723382352,4.14659361972453,4.86708096538374,5.62574006126727,3.53239675751252,1.78465389374533,0,0,0,0.631325567659422,0.130120442962704,0,0,0.30140963567143,0.884474488967262,1.0249097622788,2.06143794031403,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.790575555893047,2.24924921495265,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,1.45413491791002,0.356497378384721,0.632073515871632,3.16255825724996,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0,0.354680467284547,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.22227665555024,3.43737308063638,7.04598047609119,8.22099023724771,5.2877572817279,5.40018000185445,3.15224842256954,3.17199686288943,2.5888015587591,0.415149390336707,0.798049746802062,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,0.64183841918363,0,0,0.377252682772152,0.468207537349412,0.704276676453562,0.516919220600519,0.476293691283074,0.579421629724277,0,0,0.588795680537589,0.685738504770831,0,0.715308569841963,0.581385666529314,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,0,0.499621155875892,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Brsk2 | |||
}} |
Latest revision as of 04:42, 26 September 2015
Short description: | p3@Brsk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Brsk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_ENSMUST00000172652_5end |
EntrezGene: | Brsk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.97e-33 | 23 |
neuroblast (sensu Vertebrata) | 8.97e-33 | 23 |
neuron | 5.99e-21 | 33 |
neuronal stem cell | 5.99e-21 | 33 |
neuroblast | 5.99e-21 | 33 |
electrically signaling cell | 5.99e-21 | 33 |
electrically responsive cell | 8.70e-17 | 39 |
electrically active cell | 8.70e-17 | 39 |
neural cell | 1.15e-14 | 43 |
ectodermal cell | 3.37e-14 | 44 |
neurectodermal cell | 3.37e-14 | 44 |
neuron of cerebral cortex | 2.96e-08 | 6 |
embryonic cell | 7.66e-07 | 70 |