FFCP PHASE1:Mm9::chr7:147282990..147283018,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=309|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:147282990..147283018,+|id=chr7:147282990..147283018,+|ontology_enrichment_celltype=CL:0002563!1.74e-13!9;CL:0002251!1.74e-13!9;CL:0000239!2.66e-12!6;CL:0000677!2.66e-12!6;CL:0000212!2.66e-12!6;CL:0000584!2.66e-12!6;CL:0000075!2.06e-10!7;CL:0002076!1.86e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.19e-18,6;CL:0000677,1.19e-18,6;CL:0000584,1.19e-18,6;CL:0000075,4.90e-16,7;CL:0002563,1.53e-12,9;CL:0002251,1.53e-12,9;CL:0002076,1.29e-07,15;CL:0000066,7.76e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.37e-21!59;UBERON:0000160!7.50e-21!43;UBERON:0000344!1.18e-20!15;UBERON:0001242!5.49e-17!13;UBERON:0000060!5.49e-17!13;UBERON:0001262!5.49e-17!13;UBERON:0004786!5.49e-17!13;UBERON:0004923!1.22e-15!24;UBERON:0003350!1.74e-13!9;UBERON:0004808!1.74e-13!9;UBERON:0001277!1.74e-13!9;UBERON:0000485!9.70e-11!11;UBERON:0004119!8.65e-08!130;UBERON:0000925!8.65e-08!130;UBERON:0006595!8.65e-08!130;UBERON:0001007!2.57e-07!128;UBERON:0001555!2.57e-07!128;UBERON:0007026!2.57e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.16e-22,15;UBERON:0001962,3.65e-14,2;UBERON:0001961,3.65e-14,2;UBERON:0001744,3.65e-14,2;UBERON:0004923,1.78e-13,24;UBERON:0000160,2.06e-13,31;UBERON:0001242,2.52e-13,13;UBERON:0001262,2.52e-13,13;UBERON:0004786,2.52e-13,13;UBERON:0003350,1.53e-12,9;UBERON:0004808,1.53e-12,9;UBERON:0001277,1.53e-12,9;UBERON:0000485,2.62e-10,11;UBERON:0002465,9.30e-10,3;UBERON:0005409,1.32e-08,47;UBERON:0006834,1.84e-08,1;UBERON:0005795,6.61e-08,4;UBERON:0000995,6.61e-08,4;UBERON:0003199,7.68e-08,1|phase1_expression=0,1.04692622291808,2.72999543633722,9.37639055051173,41.0734498556005,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0.57423196411502,1.7230479846363,0,0.760093677825496,0.252030129759931,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5034518470927,2.64450566663544,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,1.15289268306808,0,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.655087691238533,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9060208267009,2.19781949120718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:147282990..147283018,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=309 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:147282990..147283018,+ | |||
|description=CAGE_peak_at_chr7:147282990..147283018,+ | |||
|id=chr7:147282990..147283018,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.74e-13!9;CL:0002251!1.74e-13!9;CL:0000239!2.66e-12!6;CL:0000677!2.66e-12!6;CL:0000212!2.66e-12!6;CL:0000584!2.66e-12!6;CL:0000075!2.06e-10!7;CL:0002076!1.86e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.19e-18,6;CL:0000677,1.19e-18,6;CL:0000584,1.19e-18,6;CL:0000075,4.90e-16,7;CL:0002563,1.53e-12,9;CL:0002251,1.53e-12,9;CL:0002076,1.29e-07,15;CL:0000066,7.76e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.37e-21!59;UBERON:0000160!7.50e-21!43;UBERON:0000344!1.18e-20!15;UBERON:0001242!5.49e-17!13;UBERON:0000060!5.49e-17!13;UBERON:0001262!5.49e-17!13;UBERON:0004786!5.49e-17!13;UBERON:0004923!1.22e-15!24;UBERON:0003350!1.74e-13!9;UBERON:0004808!1.74e-13!9;UBERON:0001277!1.74e-13!9;UBERON:0000485!9.70e-11!11;UBERON:0004119!8.65e-08!130;UBERON:0000925!8.65e-08!130;UBERON:0006595!8.65e-08!130;UBERON:0001007!2.57e-07!128;UBERON:0001555!2.57e-07!128;UBERON:0007026!2.57e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.16e-22,15;UBERON:0001962,3.65e-14,2;UBERON:0001961,3.65e-14,2;UBERON:0001744,3.65e-14,2;UBERON:0004923,1.78e-13,24;UBERON:0000160,2.06e-13,31;UBERON:0001242,2.52e-13,13;UBERON:0001262,2.52e-13,13;UBERON:0004786,2.52e-13,13;UBERON:0003350,1.53e-12,9;UBERON:0004808,1.53e-12,9;UBERON:0001277,1.53e-12,9;UBERON:0000485,2.62e-10,11;UBERON:0002465,9.30e-10,3;UBERON:0005409,1.32e-08,47;UBERON:0006834,1.84e-08,1;UBERON:0005795,6.61e-08,4;UBERON:0000995,6.61e-08,4;UBERON:0003199,7.68e-08,1 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,9.37639055051173,41.0734498556005,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,0.57423196411502,1.7230479846363,0,0.760093677825496,0.252030129759931,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5034518470927,2.64450566663544,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,1.15289268306808,0,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.655087691238533,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9060208267009,2.19781949120718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:147282990..147283018,+ | |||
}} |
Latest revision as of 11:29, 4 August 2015
Short description: | p@chr7:147282990..147283018, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:147282990..147283018, + |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.19e-18 | 6 |
gut absorptive cell | 1.19e-18 | 6 |
enterocyte | 1.19e-18 | 6 |
columnar/cuboidal epithelial cell | 4.90e-16 | 7 |
intestinal epithelial cell | 1.53e-12 | 9 |
epithelial cell of alimentary canal | 1.53e-12 | 9 |
endo-epithelial cell | 1.29e-07 | 15 |
epithelial cell | 7.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.16e-22 | 15 |
gut-associated lymphoid tissue | 3.65e-14 | 2 |
mucosa-associated lymphoid tissue | 3.65e-14 | 2 |
lymphoid tissue | 3.65e-14 | 2 |
organ component layer | 1.78e-13 | 24 |
intestine | 2.06e-13 | 31 |
intestinal mucosa | 2.52e-13 | 13 |
wall of intestine | 2.52e-13 | 13 |
gastrointestinal system mucosa | 2.52e-13 | 13 |
epithelium of mucosa | 1.53e-12 | 9 |
gastrointestinal system epithelium | 1.53e-12 | 9 |
intestinal epithelium | 1.53e-12 | 9 |
simple columnar epithelium | 2.62e-10 | 11 |
lymphoid system | 9.30e-10 | 3 |
gastrointestinal system | 1.32e-08 | 47 |
uterus or analog | 1.84e-08 | 1 |
embryonic uterus | 6.61e-08 | 4 |
uterus | 6.61e-08 | 4 |
egg chamber | 7.68e-08 | 1 |