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FFCP PHASE1:Mm9::chr7:13620071..13620131,-: Difference between revisions

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{{FFCP|EntrezGene=68953|HGNC=|MCL_coexpression_id=1175|UniProt=Q9DB34|association_with_transcript=0bp_to_ENSMUST00000005711,NM_026885,uc009ffc.2_5end|description=CAGE_peak_1_at_Chmp2a_5end|id=chr7:13620071..13620131,-|ontology_enrichment_celltype=CL:0000066!2.14e-08!25;CL:0000223!1.14e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,2.14e-08,25;CL:0000223,1.14e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.13e-12!130;UBERON:0000925!1.13e-12!130;UBERON:0006595!1.13e-12!130;UBERON:0001007!3.58e-12!128;UBERON:0001555!3.58e-12!128;UBERON:0007026!3.58e-12!128;UBERON:0005409!2.53e-11!59;UBERON:0004921!2.63e-11!126;UBERON:0004185!2.63e-11!126;UBERON:0000160!7.68e-11!43;UBERON:0004923!1.59e-08!24;UBERON:0000344!1.66e-08!15;UBERON:0007023!1.11e-07!51;UBERON:0001242!1.82e-07!13;UBERON:0000060!1.82e-07!13;UBERON:0001262!1.82e-07!13;UBERON:0004786!1.82e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.49e-10,118;UBERON:0000925,3.49e-10,118;UBERON:0006595,3.49e-10,118;UBERON:0001007,9.78e-10,116;UBERON:0001555,9.78e-10,116;UBERON:0007026,9.78e-10,116;UBERON:0005409,3.93e-09,47;UBERON:0004921,5.85e-09,114;UBERON:0000160,7.70e-09,31;UBERON:0004923,1.59e-08,24;UBERON:0000344,1.66e-08,15;UBERON:0007023,1.11e-07,51;UBERON:0001242,1.82e-07,13;UBERON:0001262,1.82e-07,13;UBERON:0004786,1.82e-07,13|phase1_expression=39.2364675406745,155.643031807155,148.784751280378,131.874396129778,127.227515406372,71.0129320187294,77.0921713965235,71.0178278928669,26.609068486665,37.6843887378409,63.6930841798879,50.5755488030433,62.8306678847525,61.4565429005552,69.6199402194735,74.9158489342356,113.32902425676,53.3131059455422,50.8694548677291,39.0438479654188,48.6447619664119,30.28374011627,31.8663742749501,119.834324672262,115.163459095719,169.972661378046,125.78250287845,128.205383448104,203.895129076689,189.526657579468,126.829852094834,43.8171164687146,23.3724619282137,0,75.6791243748339,74.97182505668,68.600903704156,256.978421272461,254.715322314759,290.555677905458,250.586613901212,230.869373915955,272.371308050477,55.0169094553273,53.2228888902451,49.3740763314923,46.1610893165343,48.6196098728396,53.6034285872111,73.1056420519306,62.0139847800356,57.5010257459886,51.0059122415519,51.5007120828054,37.642505503956,49.9083305909737,64.4700239862203,68.0687161806224,20.4339625468194,19.0436752537932,19.6487735086916,49.1324571500242,64.9185201161132,77.841325544841,75.1538435550901,72.4689717245022,30.2596111623589,48.4115064705159,26.9592992002042,30.7813539396255,29.8661445118962,30.564655331207,40.4189429941453,31.4801353982432,24.1530586965956,22.0612508786405,60.5637345496638,59.6299868857827,57.2952369045788,20.1786020227197,28.4526571603494,28.129322010065,64.2120897703176,61.3411244934531,55.9241586863125,33.8822873294718,30.467539691008,25.7231235238915,73.6815861131881,57.2076710008366,67.5384258674909,91.204930960027,92.4761013842541,123.052327693422,75.3740644239296,98.1178882743165,77.9466531731223,58.968891612008,79.7543034130807,65.7211608589233,46.4783285263046,70.5795625778748,61.153257529595,42.6640021891999,98.5034236601024,102.104025786465,98.071742332868,84.4960709921044,53.0822661476702,46.610831666355,31.921300124969,47.496614616694,52.3497178771253,55.6166543639177,43.7429990544822,62.0792961168597,67.2370312237497,45.6933967866921,72.5380652598897,46.1035522350116,54.3270135412568,55.2757788574153,98.7876334456047,43.0387771606974,41.2610012422507,133.859496929302,30.4330416245037,67.1891058712617,36.3420849428965,34.9012189813237,60.8475801748773,32.7957859014576,38.7628234028777,37.5901722275586,41.7653969564716,44.1296235544301,35.2364198922094,56.9783925394226,94.5183116541943,80.3887889486331,25.2433659347645,32.6460988295532,30.9706863265201,38.8818430016145,28.3712201461037,31.3878614697882,38.698812243168,56.9147415625834,12.287375597172,15.695804653929,16.1875034230833,27.6186622858744,31.141291913267,41.79025998266,72.641094152004,28.4619001550445,60.3903341089382,53.7857125869755,40.9195439129653,24.0265896141182,32.5991223373724,39.9737776443453,27.2256445922992,40.92696020346,38.5667782218446,46.0417210605808,41.8506506183406,48.924678451844,52.6591519723137,55.3244353946551,49.2087673943344,58.1875949952823,53.7897782463074,57.037727973158,45.0020489927232,32.4149528994746,178.095724028267,107.366930065399,22.1819780556643,23.6881405297647,27.0621668776396,32.4710474643581,50.0350598650958,57.6383647121054,111.988858524505,112.983482940671,98.5234018497056,99.0803230764931,100.601468953466,128.531175437554,124.063240628074,121.077894138655,28.2605172420092,33.1320686568214,25.9227792048085,29.5294425375706,43.0574521512129,37.873342740772,45.467070192341,70.7052608822294,65.3114707820119,62.8091564361965,79.4493040593559,43.5465725919005,44.8154508858103,43.6232498026616,54.9750928962843,50.4060263882551,55.7630615401309,54.9499622531048,44.5871873631347,64.7964935123872,47.443508154027,58.0539878362865,74.2649662012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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68953
|HGNC=
|MCL_coexpression_id=1175
|TSSclassifier=NA
|UniProt=Q9DB34
|association_with_transcript=0bp_to_ENSMUST00000005711,NM_026885,uc009ffc.2_5end
|cluster_id=chr7:13620071..13620131,-
|description=CAGE_peak_1_at_Chmp2a_5end
|id=chr7:13620071..13620131,-
|ontology_enrichment_celltype=CL:0000066!2.14e-08!25;CL:0000223!1.14e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,2.14e-08,25;CL:0000223,1.14e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.49e-10,118;UBERON:0000925,3.49e-10,118;UBERON:0006595,3.49e-10,118;UBERON:0001007,9.78e-10,116;UBERON:0001555,9.78e-10,116;UBERON:0007026,9.78e-10,116;UBERON:0005409,3.93e-09,47;UBERON:0004921,5.85e-09,114;UBERON:0000160,7.70e-09,31;UBERON:0004923,1.59e-08,24;UBERON:0000344,1.66e-08,15;UBERON:0007023,1.11e-07,51;UBERON:0001242,1.82e-07,13;UBERON:0001262,1.82e-07,13;UBERON:0004786,1.82e-07,13
|phase1_expression=39.2364675406745,155.643031807155,148.784751280378,131.874396129778,127.227515406372,71.0129320187294,77.0921713965235,71.0178278928669,26.609068486665,37.6843887378409,63.6930841798879,50.5755488030433,62.8306678847525,61.4565429005552,69.6199402194735,74.9158489342356,113.32902425676,53.3131059455422,50.8694548677291,39.0438479654188,48.6447619664119,30.28374011627,31.8663742749501,119.834324672262,115.163459095719,169.972661378046,125.78250287845,128.205383448104,203.895129076689,189.526657579468,126.829852094834,43.8171164687146,23.3724619282137,0,75.6791243748339,74.97182505668,68.600903704156,256.978421272461,254.715322314759,290.555677905458,250.586613901212,230.869373915955,272.371308050477,55.0169094553273,53.2228888902451,49.3740763314923,46.1610893165343,48.6196098728396,53.6034285872111,73.1056420519306,62.0139847800356,57.5010257459886,51.0059122415519,51.5007120828054,37.642505503956,49.9083305909737,64.4700239862203,68.0687161806224,20.4339625468194,19.0436752537932,19.6487735086916,49.1324571500242,64.9185201161132,77.841325544841,75.1538435550901,72.4689717245022,30.2596111623589,48.4115064705159,26.9592992002042,30.7813539396255,29.8661445118962,30.564655331207,40.4189429941453,31.4801353982432,24.1530586965956,22.0612508786405,60.5637345496638,59.6299868857827,57.2952369045788,20.1786020227197,28.4526571603494,28.129322010065,64.2120897703176,61.3411244934531,55.9241586863125,33.8822873294718,30.467539691008,25.7231235238915,73.6815861131881,57.2076710008366,67.5384258674909,91.204930960027,92.4761013842541,123.052327693422,75.3740644239296,98.1178882743165,77.9466531731223,58.968891612008,79.7543034130807,65.7211608589233,46.4783285263046,70.5795625778748,61.153257529595,42.6640021891999,98.5034236601024,102.104025786465,98.071742332868,84.4960709921044,53.0822661476702,46.610831666355,31.921300124969,47.496614616694,52.3497178771253,55.6166543639177,43.7429990544822,62.0792961168597,67.2370312237497,45.6933967866921,72.5380652598897,46.1035522350116,54.3270135412568,55.2757788574153,98.7876334456047,43.0387771606974,41.2610012422507,133.859496929302,30.4330416245037,67.1891058712617,36.3420849428965,34.9012189813237,60.8475801748773,32.7957859014576,38.7628234028777,37.5901722275586,41.7653969564716,44.1296235544301,35.2364198922094,56.9783925394226,94.5183116541943,80.3887889486331,25.2433659347645,32.6460988295532,30.9706863265201,38.8818430016145,28.3712201461037,31.3878614697882,38.698812243168,56.9147415625834,12.287375597172,15.695804653929,16.1875034230833,27.6186622858744,31.141291913267,41.79025998266,72.641094152004,28.4619001550445,60.3903341089382,53.7857125869755,40.9195439129653,24.0265896141182,32.5991223373724,39.9737776443453,27.2256445922992,40.92696020346,38.5667782218446,46.0417210605808,41.8506506183406,48.924678451844,52.6591519723137,55.3244353946551,49.2087673943344,58.1875949952823,53.7897782463074,57.037727973158,45.0020489927232,32.4149528994746,178.095724028267,107.366930065399,22.1819780556643,23.6881405297647,27.0621668776396,32.4710474643581,50.0350598650958,57.6383647121054,111.988858524505,112.983482940671,98.5234018497056,99.0803230764931,100.601468953466,128.531175437554,124.063240628074,121.077894138655,28.2605172420092,33.1320686568214,25.9227792048085,29.5294425375706,43.0574521512129,37.873342740772,45.467070192341,70.7052608822294,65.3114707820119,62.8091564361965,79.4493040593559,43.5465725919005,44.8154508858103,43.6232498026616,54.9750928962843,50.4060263882551,55.7630615401309,54.9499622531048,44.5871873631347,64.7964935123872,47.443508154027,58.0539878362865,74.2649662012654,86.8871340138064,84.6755791823426,69.4718670763249,72.6080037354756,22.5494780006877,22.4891667489996,29.1961547533324,36.3769884847178,40.033995528594,50.9413391496069,59.5157625966286,52.1772326991492,54.7017783432474,62.3468145450775,79.6375709518487,75.9813920209941,67.9850575333104,105.553898757491,110.412853815198,91.4681547815407,88.0238220712097,46.5596710964597,44.1888058452606,55.4100115373163,46.2021796784003,27.4492150892143,28.5020283336546,24.5582673415391,26.7645053706858,32.3058077419471,42.4614796183249,28.3367491172426,25.7185154961954,26.4842811224171,33.0960955914461,35.6269613872754,42.7357448801413,32.9031657894224,42.8922319728592,100.886305138372,39.573243693262,44.4415628738184,81.477394454548,70.8724542913855,77.7810924298137,70.8093523280926,57.0747955279684,57.0395805415554,73.3205278411093,99.0934920604988,124.794007330306,58.5556121896515,25.7487364464774,38.9369638186091,38.1519922356234,34.9360260275279,42.0950409540887,50.1874512836469,48.7143918583359,72.0442143755591,67.3625985346948,120.629033736064,121.356282164929,63.9399129715786,70.8676867905831,75.8014384419917,79.1159136771195,122.130470547907,50.2502568448481,57.9252285904721,44.5795634800561,52.4100512456284,72.7102244038107,62.6059562962295,63.3715539782068,29.0663115289493,30.5094166065574,26.3961949966449,137.472568994176,16.449471666219,23.3817387195876,43.8501683736513,57.2901931079644,82.1043239685628,67.2973088460255,65.3788834787407,113.602078821069,120.282695214784,90.7155397106911,65.3883808873661,26.6139451958282,40.2064131810747,35.9734698436488,42.3644221006958,35.4807863530634,35.4418860710177,30.8584392080162,36.9104892378502,34.0633610364669,43.2045009386798,37.6053233547532,41.1532187039033,42.4196253090737,43.0037924056502,32.0457785244792,35.7626438606277,34.736484911271,37.6608294295172,43.8194392774961,35.0551310612999,35.389990983031,44.5382514980669,40.0241261223771,32.8424095130209,97.0406041873105,69.4816034060822,44.318645165081,69.6721157910926,68.968685069492,59.3076622425735,47.2531190609544,87.891035422417,102.320709223214,49.6981621503019,54.778703144354,54.4250737767427,52.7589269795121,54.1215190618807,54.3883606120584,68.1772725234124,63.4952896546151,54.8302314870888,57.471394604452,23.4559405540239,30.3258903784784,29.3661801897111,34.5211538236978,43.5995378266203,50.3731213153039,31.1145418922261,35.025959730612,33.6965170071406,40.4315538822076,36.7544984840848,35.8390048633545,43.6369424809652,36.238236261156,38.5966351381721,33.3405583898152,35.9241410429052,45.5265760294344,47.8019644931836,43.4236814396472,40.458571781479,49.1607983061365,39.8188437212026,40.260957407155,41.1257992414995,37.145812864446,40.6100099777555,47.8786874816874,42.9140999752923,39.8411012876994,39.7427310715983,43.1449632804968,46.2431078781749,39.8187681847933,44.1756139146814,37.9712078465678,39.534441827274,47.2716318906256,35.7709180968737,49.8536607210105,44.9823601103618
|short_description=p1@Chmp2a
}}

Latest revision as of 00:05, 26 September 2015

Short description:p1@Chmp2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chmp2a_5end
Coexpression cluster:MCL_coexpression_mm9:1175
Association with transcript: 0bp_to_ENSMUST00000005711, NM_026885, uc009ffc.2_5end
EntrezGene:Chmp2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chmp2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5155.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6148.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I3131.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I4127.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I771.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I877.09
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E971.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F237.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F150.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.83
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E861.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A169.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A374.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5113.33
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A450.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A348.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1119.83
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2115.16
GP2+ M cell, pool1.CNhs13228.11845-124H9169.97
GP2+ M cell, pool2.CNhs13231.11846-124I1125.78
GP2+ M cell, pool3.CNhs13240.11847-124I2128.21
Ileum epithelium, pool1.CNhs13199.10252-104B9203.90
Ileum epithelium, pool2.CNhs13232.10253-104C1189.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8126.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F575.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F674.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F768.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8256.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1254.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3290.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9250.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2230.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4272.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D855.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D953.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B349.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C248.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B853.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C373.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C462.01
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I951.50
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.64
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C149.91
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E164.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C568.07
Mouse Granule cells, donor1.CNhs12131.11713-123C320.43
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C649.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C777.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E775.15
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D272.47
Mouse Microglia, donor1.CNhs12629.11718-123C830.26
Mouse Microglia, donor2.CNhs12634.11736-123E848.41
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D540.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D231.48
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F359.63
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D757.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.45
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E464.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E561.34
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I655.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.72
Mouse Schwann, donor1.CNhs12507.11728-123D973.68
Mouse Schwann, donor2.CNhs12573.11746-123F957.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G367.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F791.20
Mouse hepatocyte, donor1.CNhs13078.11714-123C492.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C8123.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F475.37
Mouse hepatocyte, donor8.CNhs13091.11824-124F698.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A777.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I758.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E379.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I865.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H170.58
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I861.15
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G198.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2102.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G398.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B684.50
accessory axillary lymph node, adult.CNhs10475.1063-29H953.08
adrenal gland, adult.CNhs10508.49-24D746.61
adrenal gland, embryo E14.CNhs11038.406-44C531.92
adrenal gland, embryo E16.CNhs11004.1254-43D647.50
adrenal gland, embryo E17.CNhs11043.1263-45I152.35
adrenal gland, embryo E18.CNhs11026.1262-18F555.62
adrenal gland, neonate N00.CNhs11191.1311-23C143.74
adrenal gland, neonate N25.CNhs11223.1377-27I362.08
amnion, adult pregnant day17.5.CNhs10488.583-22A867.24
aorta, adult.CNhs10498.46-23H145.69
bone (os femoris), adult.CNhs10483.56-12G272.54
bone (os femoris), neonate N02.CNhs11227.1985-43F546.10
bone (os femoris), neonate N16.CNhs11225.1525-43A654.33
bone (os femoris), neonate N20.CNhs11195.1350-25C355.28
cecum, adult.CNhs10467.37-13H498.79
cerebellum, adult.CNhs10494.15-8B243.04
cerebellum, neonate N30.CNhs11135.1395-42I241.26
colon, adult.CNhs10468.36-18H7133.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C730.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D167.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.34
corpora quadrigemina, adult.CNhs10501.16-22A434.90
corpus striatum, adult.CNhs10487.19-21D860.85
corpus striatum, neonate N00.CNhs11226.630-43F132.80
cortex, adult.CNhs10473.12-14D538.76
cortex, neonate N30.CNhs11107.1392-42F237.59
diencephalon, adult.CNhs10482.20-12F241.77
diencephalon, neonate N30.CNhs11201.1388-42B244.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B135.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A256.98
epididymis, adult.CNhs10490.58-23B294.52
eyeball, adult.CNhs10484.31-12G480.39
eyeball, embryo E12.CNhs11016.345-16C625.24
eyeball, embryo E14.CNhs10521.399-16E232.65
eyeball, embryo E15.CNhs10593.426-16C930.97
eyeball, embryo E17.CNhs11023.1261-18D438.88
eyeball, neonate N00.CNhs11207.633-15C628.37
eyeball, neonate N01.CNhs11140.1532-43E731.39
eyeball, neonate N02.CNhs11205.1551-44G838.70
eyeball, neonate N16.CNhs11188.777-19A256.91
forelimb, embryo E11.CNhs10596.335-25E212.29
forelimb, embryo E12.CNhs10600.359-14H215.70
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A827.62
forelimb, embryo E15.CNhs11007.437-20E731.14
forelimb, embryo E17.CNhs10598.1517-43C441.79
forelimb, embryo E18.CNhs11008.1520-43B572.64
gonad, embryo E13.CNhs11044.1564-45I628.46
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C860.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D253.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D540.92
heart, embryo E11.CNhs10586.331-24E924.03
heart, embryo E12.CNhs11015.353-12F532.60
heart, embryo E13.CNhs11013.376-3I939.97
heart, embryo E14.CNhs10597.403-26D427.23
heart, embryo E15.CNhs11017.431-16C840.93
heart, embryo E16.CNhs11021.457-17C638.57
heart, embryo E17.CNhs11025.479-18E546.04
heart, embryo E18.CNhs11030.1283-20G341.85
heart, neonate N00.CNhs11213.639-21E348.92
heart, neonate N03.CNhs11221.1349-25I252.66
heart, neonate N10.CNhs11118.749-24G155.32
heart, neonate N16.CNhs11209.782-15G149.21
heart, neonate N20.CNhs11127.821-26I658.19
heart, neonate N25.CNhs11196.1351-25D353.79
heart, neonate N30.CNhs11202.1390-42D257.04
hippocampus, adult.CNhs10478.13-16E845.00
hippocampus, neonate N00.CNhs11228.627-43G132.41
intestinal mucosa, adult.CNhs10506.860-29I3178.10
intestine, adult.CNhs10496.178-9A3107.37
intestine, embryo E12.CNhs11019.1251-16I522.18
intestine, embryo E13.CNhs11010.381-16D523.69
intestine, embryo E15.CNhs10602.976-16D827.06
intestine, embryo E16.CNhs10585.463-22H432.47
intestine, embryo E17.CNhs10582.482-18D350.04
intestine, embryo E18.CNhs10526.1289-20F757.64
intestine, neonate N00.CNhs11126.644-26D1111.99
intestine, neonate N01.CNhs11192.1322-23E9112.98
intestine, neonate N06.CNhs11102.688-20B898.52
intestine, neonate N07.CNhs11095.720-20F299.08
intestine, neonate N10.CNhs11098.755-23A5100.60
intestine, neonate N20.CNhs11187.827-18D1128.53
intestine, neonate N25.CNhs11121.1352-25E3124.06
intestine, neonate N30.CNhs11131.1384-42G1121.08
kidney, embryo E14.CNhs10606.411-4I928.26
kidney, embryo E15.CNhs10997.434-16F833.13
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I229.53
kidney, embryo E18.CNhs11001.1288-20C743.06
kidney, neonate N00.CNhs11214.646-21G737.87
kidney, neonate N10.CNhs11206.758-6D545.47
kidney, neonate N20.CNhs11113.832-19I170.71
kidney, neonate N25.CNhs11122.1353-25F365.31
kidney, neonate N30.CNhs11203.1385-42H162.81
liver, adult pregnant day01.CNhs10466.508-5B279.45
liver, embryo E12.CNhs10601.355-15F843.55
liver, embryo E13.CNhs10524.378-3H644.82
liver, embryo E14.CNhs10594.409-16E143.62
liver, embryo E15.CNhs10520.433-16D754.98
liver, embryo E16.CNhs10523.462-17F550.41
liver, embryo E17.CNhs10510.481-18A355.76
liver, embryo E18.CNhs10579.499-43G454.95
liver, neonate N00.CNhs11117.641-24F444.59
liver, neonate N03.CNhs11123.1345-25G264.80
liver, neonate N06.CNhs11101.684-20A847.44
liver, neonate N07.CNhs11103.716-20H258.05
liver, neonate N10.CNhs11115.751-24B974.26
liver, neonate N20.CNhs11220.823-25A386.89
liver, neonate N25.CNhs11198.1368-26H184.68
liver, neonate N30.CNhs11106.1382-42D169.47
lung, adult.CNhs10474.28-22B172.61
lung, embryo E12.CNhs10522.354-16G222.55
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C529.20
lung, embryo E16.CNhs10998.458-17B636.38
lung, embryo E17.CNhs10605.480-44A640.03
lung, embryo E18.CNhs10583.1287-20I650.94
lung, neonate N00.CNhs11224.640-42C659.52
lung, neonate N06.CNhs11212.683-20E552.18
lung, neonate N07.CNhs11111.715-19A354.70
lung, neonate N10.CNhs11219.750-23E662.35
lung, neonate N20.CNhs11109.822-18A479.64
lung, neonate N25.CNhs11119.1359-25C775.98
lung, neonate N30.CNhs11133.1394-42H267.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1105.55
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1110.41
mammary gland, adult lactating day02.CNhs10480.595-22B691.47
mammary gland, adult pregnant day19.CNhs10476.588-5H288.02
medulla oblongata, adult.CNhs10477.17-12C246.56
medulla oblongata, neonate N30.CNhs11200.1396-42A344.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C755.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C246.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.50
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.31
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I735.63
ovary, embryo E18.CNhs11040.505-44H742.74
ovary, neonate N00.CNhs11217.1299-22I432.90
oviduct, adult pregnant day01.CNhs10500.988-6G642.89
pancreas, adult.CNhs10486.34-16E4100.89
pancreas, embryo E14.CNhs11012.405-44F439.57
pancreas, embryo E15.CNhs11042.1556-45F244.44
pancreas, embryo E16.CNhs11003.460-26E581.48
pancreas, embryo E17.CNhs10599.1558-45G370.87
pancreas, embryo E18.CNhs10580.1535-43I777.78
pancreas, neonate N00.CNhs11105.645-26G970.81
pancreas, neonate N01.CNhs11138.1531-43D757.07
pancreas, neonate N02.CNhs11139.1539-43D857.04
pancreas, neonate N16.CNhs11136.787-43B673.32
pancreas, neonate N25.CNhs11094.1555-45E299.09
pancreas, neonate N30.CNhs11182.1548-44H5124.79
pituitary gland, adult.CNhs10493.21-1G858.56
pituitary gland, embryo E12.CNhs11018.346-16E625.75
pituitary gland, embryo E13.CNhs11009.370-44C738.94
pituitary gland, embryo E14.CNhs11037.398-44A538.15
pituitary gland, embryo E15.CNhs10592.427-16B934.94
pituitary gland, embryo E16.CNhs11036.449-43F642.10
pituitary gland, embryo E17.CNhs11039.1265-44F550.19
pituitary gland, neonate N00.CNhs11190.1308-22E948.71
placenta, adult pregnant day10.CNhs10472.539-13I772.04
placenta, adult pregnant day17.CNhs10464.577-18G367.36
prostate, adult.CNhs10470.859-1F8120.63
skin, adult.CNhs10492.30-1C3121.36
skin, neonate N00.CNhs11124.650-25G463.94
skin, neonate N03.CNhs11215.662-22H370.87
skin, neonate N06.CNhs11097.693-20I575.80
skin, neonate N10.CNhs11108.762-6C479.12
small intestine, neonate N16.CNhs11114.790-21I1122.13
spinal cord, adult.CNhs10505.24-13C950.25
spleen, adult.CNhs10465.25-2G257.93
spleen, embryo E16.CNhs11035.461-43C144.58
spleen, embryo E18.CNhs11011.1271-21F252.41
spleen, neonate N10.CNhs11116.752-24D172.71
spleen, neonate N20.CNhs11112.824-19H162.61
spleen, neonate N25.CNhs11099.1354-25G363.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C629.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C930.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.40
stomach, adult.CNhs10503.33-1H6137.47
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G823.38
stomach, embryo E16.CNhs11022.459-17D443.85
stomach, embryo E17.CNhs11006.1035-18D557.29
stomach, embryo E18.CNhs10999.1286-20C682.10
stomach, neonate N03.CNhs11193.1340-24B867.30
stomach, neonate N07.CNhs11210.718-18A965.38
stomach, neonate N25.CNhs11104.1355-25E4113.60
stomach, neonate N30.CNhs11134.1386-42I1120.28
submandibular gland, adult.CNhs10469.59-29C190.72
testis, adult.CNhs10504.57-7G565.39
testis, embryo E13.CNhs11031.389-23F526.61
testis, embryo E15.CNhs11034.443-27C540.21
testis, embryo E16.CNhs11033.470-26G535.97
testis, embryo E17.CNhs11029.486-18I542.36
testis, embryo E18.CNhs11027.503-18G535.48
testis, neonate N00.CNhs11189.1300-22B735.44
testis, neonate N07.CNhs11222.726-26I430.86
testis, neonate N10.CNhs11204.763-44D936.91
testis, neonate N20.CNhs11110.839-18H334.06
testis, neonate N30.CNhs11130.1391-42E243.20
thymus, adult.CNhs10471.38-12B537.61
thymus, embryo E14.CNhs11041.402-44I441.15
thymus, embryo E15.CNhs11005.430-45I242.42
thymus, embryo E16.CNhs11002.456-26C543.00
thymus, embryo E17.CNhs10581.478-18C132.05
thymus, embryo E18.CNhs10595.1273-19G435.76
thymus, neonate N02.CNhs11181.1541-43F834.74
thymus, neonate N03.CNhs11137.2104-43C737.66
thymus, neonate N06.CNhs11197.681-26C443.82
thymus, neonate N07.CNhs11211.713-19D335.06
thymus, neonate N10.CNhs11194.748-24E435.39
thymus, neonate N20.CNhs11186.820-7A244.54
thymus, neonate N25.CNhs11125.1362-25G740.02
thymus, neonate N30.CNhs11132.1393-42G232.84
tongue, adult.CNhs10499.32-1B497.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H369.48
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F744.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G569.67
urinary bladder, adult.CNhs10481.879-12E468.97
uterus, adult pregnant day19.CNhs10497.590-15F559.31
uterus, adult.CNhs10509.92-27E547.25
vagina, adult.CNhs10502.89-27D587.89
vesicular gland, adult.CNhs10491.51-27F8102.32
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A354.43
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A554.39
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A763.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A854.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.47
whole body, embryo E11.CNhs11014.324-5I823.46
whole body, embryo E12.CNhs10587.857-27C930.33
whole body, embryo E13.CNhs10512.372-23H229.37
whole body, embryo E14.5.CNhs10578.420-27D234.52
whole body, embryo E14.CNhs10519.395-14B143.60
whole body, embryo E16.CNhs10514.453-14F250.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G533.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G540.43
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G536.75
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G543.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G536.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G538.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G545.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G547.80
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G543.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G549.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G541.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G537.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.84
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G546.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.82
whole body, embryo E17.5.CNhs10513.490-9F944.18
whole body, embryo E17.CNhs10517.475-3I537.97
whole body, embryo E18.CNhs10516.493-3B339.53
whole body, neonate N00.CNhs10525.657-19C247.27
whole body, neonate N01.CNhs10576.659-23C635.77
whole body, neonate N06.CNhs10515.692-21D149.85
whole body, neonate N10.CNhs10518.761-6B444.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.14e-0825
endodermal cell1.14e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.49e-10118
endoderm3.49e-10118
presumptive endoderm3.49e-10118
digestive system9.78e-10116
digestive tract9.78e-10116
primitive gut9.78e-10116
gastrointestinal system3.93e-0947
subdivision of digestive tract5.85e-09114
intestine7.70e-0931
organ component layer1.59e-0824
mucosa1.66e-0815
adult organism1.11e-0751
intestinal mucosa1.82e-0713
wall of intestine1.82e-0713
gastrointestinal system mucosa1.82e-0713
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