FFCP PHASE1:Mm9::chr6:136412190..136412214,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=476|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:136412190..136412214,+|id=chr6:136412190..136412214,+|ontology_enrichment_celltype=CL:0000988!1.60e-10!32;CL:0002032!1.60e-10!32;CL:0000037!1.60e-10!32;CL:0000566!1.60e-10!32;CL:0000837!1.60e-10!32;CL:0002320!2.58e-08!46;CL:0000134!2.58e-08!46;CL:0002031!9.35e-08!25;CL:0000838!1.00e-07!12;CL:0000084!1.88e-07!11;CL:0000827!1.88e-07!11;CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9;CL:0000542!8.37e-07!13;CL:0000051!8.37e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-14,32;CL:0002032,3.51e-14,32;CL:0000037,3.51e-14,32;CL:0000837,3.51e-14,32;CL:0002320,3.63e-10,46;CL:0000134,3.63e-10,46;CL:0000049,1.61e-09,19;CL:0002031,4.47e-09,25;CL:0000791,7.74e-09,9;CL:0000789,7.74e-09,9;CL:0002420,7.74e-09,9;CL:0002419,7.74e-09,9;CL:0000790,7.74e-09,9;CL:0000219,4.35e-08,54;CL:0000084,4.32e-07,11;CL:0000827,4.32e-07,11;CL:0000624,5.91e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.39e-19!48;UBERON:0002390!1.25e-18!45;UBERON:0003061!1.25e-18!45;UBERON:0002405!1.16e-15!70;UBERON:0004177!6.68e-14!29;UBERON:0006562!5.67e-13!24;UBERON:0001557!5.67e-13!24;UBERON:0001042!5.67e-13!24;UBERON:0008814!5.67e-13!24;UBERON:0009145!5.67e-13!24;UBERON:0003408!1.21e-12!24;UBERON:0002370!3.67e-12!23;UBERON:0000974!3.67e-12!23;UBERON:0004807!3.67e-12!23;UBERON:0005058!3.67e-12!23;UBERON:0003351!3.67e-12!23;UBERON:0009113!3.67e-12!23;UBERON:0003295!3.67e-12!23;UBERON:0009722!3.67e-12!23;UBERON:0005562!3.67e-12!23;UBERON:0007690!3.67e-12!23;UBERON:0000072!1.08e-11!27;UBERON:0001004!6.24e-11!42;UBERON:0000065!1.77e-10!41;UBERON:0005057!4.49e-10!51;UBERON:0003081!1.51e-09!88;UBERON:0000063!1.15e-08!35;UBERON:0002384!2.58e-08!46;UBERON:0000077!3.28e-08!97;UBERON:0001041!9.50e-08!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.40e-27,48;UBERON:0002405,4.40e-27,48;UBERON:0002390,1.31e-26,45;UBERON:0003061,1.31e-26,45;UBERON:0006562,8.57e-22,24;UBERON:0001557,8.57e-22,24;UBERON:0001042,8.57e-22,24;UBERON:0008814,8.57e-22,24;UBERON:0009145,8.57e-22,24;UBERON:0002370,7.22e-20,23;UBERON:0000974,7.22e-20,23;UBERON:0004807,7.22e-20,23;UBERON:0005058,7.22e-20,23;UBERON:0003351,7.22e-20,23;UBERON:0009113,7.22e-20,23;UBERON:0003295,7.22e-20,23;UBERON:0009722,7.22e-20,23;UBERON:0005562,7.22e-20,23;UBERON:0007690,7.22e-20,23;UBERON:0004177,1.29e-19,29;UBERON:0005057,1.29e-19,29;UBERON:0000072,6.32e-19,27;UBERON:0003408,6.94e-19,24;UBERON:0000077,1.58e-15,35;UBERON:0007811,3.32e-13,36;UBERON:0003081,4.02e-13,87;UBERON:0000065,1.28e-12,41;UBERON:0001004,3.20e-12,42;UBERON:0000153,1.99e-10,43;UBERON:0002384,3.63e-10,46;UBERON:0000926,8.90e-08,120;UBERON:0004120,8.90e-08,120;UBERON:0006603,8.90e-08,120;UBERON:0002371,9.75e-08,16|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.84473233291,0.468129052643987,1.36974374580404,0.478632953972018,11.8128503652532,2.09808965805594,0.999329285446988,1.01237633694913,0.699561878128147,4.25873923233621,3.83920414096069,2.54633791078818,0.17008658030214,0.198581902401771,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,5.71359458542189,0,0,0,0,0,0,0,0,0.449949858640699,0,3.5524005747305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0,18.3845897389492,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0,0,0,0.433798070759735,1.76922110389975,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0.766371165625774,1.43778149407104,1.79970819298022,1.14363204365758,0.149790639404823,0,0,0,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,1.00534083520108,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.982794975566015,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.315270288212382,0,0,0.163863314715738,0,0.723245292907558,0,2.17562273527484,0.983528546038072,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,1.48397627647332,0,0,0,0.164140899745061,0,0,2.05045056957423,0,0.370389054739423,0.376736914009382,0.546776910884101,2.0590035588587,1.18984900995699,1.25956307091292,1.79659965945751,0.954670618015114,0,0,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0,0,0,6.32022241256356,0.608175645870493,1.95150818613172,1.94881234466693,1.43221356533985,2.98022032171897,1.56254084375959,2.95379054349154,2.3222283488074,0.609654453239999,2.62148081355785,3.31356794515158,7.98558285614734,4.32444538071805,3.40095575422817,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.750729901804728,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p@chr6:136412190..136412214,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=476 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:136412190..136412214,+ | |||
|description=CAGE_peak_at_chr6:136412190..136412214,+ | |||
|id=chr6:136412190..136412214,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.60e-10!32;CL:0002032!1.60e-10!32;CL:0000037!1.60e-10!32;CL:0000566!1.60e-10!32;CL:0000837!1.60e-10!32;CL:0002320!2.58e-08!46;CL:0000134!2.58e-08!46;CL:0002031!9.35e-08!25;CL:0000838!1.00e-07!12;CL:0000084!1.88e-07!11;CL:0000827!1.88e-07!11;CL:0000791!2.57e-07!9;CL:0000789!2.57e-07!9;CL:0002420!2.57e-07!9;CL:0002419!2.57e-07!9;CL:0000790!2.57e-07!9;CL:0000542!8.37e-07!13;CL:0000051!8.37e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-14,32;CL:0002032,3.51e-14,32;CL:0000037,3.51e-14,32;CL:0000837,3.51e-14,32;CL:0002320,3.63e-10,46;CL:0000134,3.63e-10,46;CL:0000049,1.61e-09,19;CL:0002031,4.47e-09,25;CL:0000791,7.74e-09,9;CL:0000789,7.74e-09,9;CL:0002420,7.74e-09,9;CL:0002419,7.74e-09,9;CL:0000790,7.74e-09,9;CL:0000219,4.35e-08,54;CL:0000084,4.32e-07,11;CL:0000827,4.32e-07,11;CL:0000624,5.91e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.39e-19!48;UBERON:0002390!1.25e-18!45;UBERON:0003061!1.25e-18!45;UBERON:0002405!1.16e-15!70;UBERON:0004177!6.68e-14!29;UBERON:0006562!5.67e-13!24;UBERON:0001557!5.67e-13!24;UBERON:0001042!5.67e-13!24;UBERON:0008814!5.67e-13!24;UBERON:0009145!5.67e-13!24;UBERON:0003408!1.21e-12!24;UBERON:0002370!3.67e-12!23;UBERON:0000974!3.67e-12!23;UBERON:0004807!3.67e-12!23;UBERON:0005058!3.67e-12!23;UBERON:0003351!3.67e-12!23;UBERON:0009113!3.67e-12!23;UBERON:0003295!3.67e-12!23;UBERON:0009722!3.67e-12!23;UBERON:0005562!3.67e-12!23;UBERON:0007690!3.67e-12!23;UBERON:0000072!1.08e-11!27;UBERON:0001004!6.24e-11!42;UBERON:0000065!1.77e-10!41;UBERON:0005057!4.49e-10!51;UBERON:0003081!1.51e-09!88;UBERON:0000063!1.15e-08!35;UBERON:0002384!2.58e-08!46;UBERON:0000077!3.28e-08!97;UBERON:0001041!9.50e-08!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.40e-27,48;UBERON:0002405,4.40e-27,48;UBERON:0002390,1.31e-26,45;UBERON:0003061,1.31e-26,45;UBERON:0006562,8.57e-22,24;UBERON:0001557,8.57e-22,24;UBERON:0001042,8.57e-22,24;UBERON:0008814,8.57e-22,24;UBERON:0009145,8.57e-22,24;UBERON:0002370,7.22e-20,23;UBERON:0000974,7.22e-20,23;UBERON:0004807,7.22e-20,23;UBERON:0005058,7.22e-20,23;UBERON:0003351,7.22e-20,23;UBERON:0009113,7.22e-20,23;UBERON:0003295,7.22e-20,23;UBERON:0009722,7.22e-20,23;UBERON:0005562,7.22e-20,23;UBERON:0007690,7.22e-20,23;UBERON:0004177,1.29e-19,29;UBERON:0005057,1.29e-19,29;UBERON:0000072,6.32e-19,27;UBERON:0003408,6.94e-19,24;UBERON:0000077,1.58e-15,35;UBERON:0007811,3.32e-13,36;UBERON:0003081,4.02e-13,87;UBERON:0000065,1.28e-12,41;UBERON:0001004,3.20e-12,42;UBERON:0000153,1.99e-10,43;UBERON:0002384,3.63e-10,46;UBERON:0000926,8.90e-08,120;UBERON:0004120,8.90e-08,120;UBERON:0006603,8.90e-08,120;UBERON:0002371,9.75e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.84473233291,0.468129052643987,1.36974374580404,0.478632953972018,11.8128503652532,2.09808965805594,0.999329285446988,1.01237633694913,0.699561878128147,4.25873923233621,3.83920414096069,2.54633791078818,0.17008658030214,0.198581902401771,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,5.71359458542189,0,0,0,0,0,0,0,0,0.449949858640699,0,3.5524005747305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0,18.3845897389492,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0,0,0,0.433798070759735,1.76922110389975,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0.766371165625774,1.43778149407104,1.79970819298022,1.14363204365758,0.149790639404823,0,0,0,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0,1.00534083520108,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.982794975566015,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.315270288212382,0,0,0.163863314715738,0,0.723245292907558,0,2.17562273527484,0.983528546038072,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0.938686832254841,0.42366414172764,0,1.48397627647332,0,0,0,0.164140899745061,0,0,2.05045056957423,0,0.370389054739423,0.376736914009382,0.546776910884101,2.0590035588587,1.18984900995699,1.25956307091292,1.79659965945751,0.954670618015114,0,0,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0,0,0,6.32022241256356,0.608175645870493,1.95150818613172,1.94881234466693,1.43221356533985,2.98022032171897,1.56254084375959,2.95379054349154,2.3222283488074,0.609654453239999,2.62148081355785,3.31356794515158,7.98558285614734,4.32444538071805,3.40095575422817,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.750729901804728,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0.50695859978048,0,0.187283014939765,0.256100609619477,0,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr6:136412190..136412214,+ | |||
}} |
Latest revision as of 07:56, 5 August 2015
Short description: | p@chr6:136412190..136412214, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:136412190..136412214, + |
Coexpression cluster: | MCL_coexpression_mm9:476 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.51e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.51e-14 | 32 |
hematopoietic stem cell | 3.51e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.51e-14 | 32 |
connective tissue cell | 3.63e-10 | 46 |
mesenchymal cell | 3.63e-10 | 46 |
common myeloid progenitor | 1.61e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 4.47e-09 | 25 |
mature alpha-beta T cell | 7.74e-09 | 9 |
alpha-beta T cell | 7.74e-09 | 9 |
immature T cell | 7.74e-09 | 9 |
mature T cell | 7.74e-09 | 9 |
immature alpha-beta T cell | 7.74e-09 | 9 |
motile cell | 4.35e-08 | 54 |
T cell | 4.32e-07 | 11 |
pro-T cell | 4.32e-07 | 11 |
CD4-positive, alpha-beta T cell | 5.91e-07 | 8 |