FFCP PHASE1:Hg19::chr9:139890350..139890365,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2064 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-151bp_to_ENST00000480181_5end | |||
|cluster_id=chr9:139890350..139890365,- | |||
|description=CAGE_peak_9_at_CLIC3_5end | |||
|id=chr9:139890350..139890365,- | |||
|ontology_enrichment_celltype=CL:0000057!1.52e-13!75;CL:0002334!1.27e-11!12;CL:0000136!3.10e-11!15;CL:0000349!3.12e-10!3;CL:0002577!3.12e-10!3;CL:0002579!5.30e-10!3;CL:0002580!1.03e-09!3;CL:0002615!1.26e-09!3;CL:0000135!5.00e-09!3;CL:0000386!5.00e-09!3;CL:0000388!5.00e-09!3;CL:0000055!8.59e-08!180;CL:0002617!5.26e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.96e-31;3!CL:0002579;1.74e-30;3!CL:0002334;5.77e-30;12!CL:0002617;1.74e-20;2!CL:0000136;8.72e-19;13!CL:0000349;1.12e-18;19!CL:0002580;8.76e-15;3!CL:0002615;3.50e-14;3!CL:0002581;1.31e-11;1!CL:0002616;4.01e-11;1!CL:0002537;9.20e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.96e-31,3;CL:0002579,1.22e-30,3;CL:0002334,4.84e-30,12;CL:0002617,2.59e-20,2;CL:0000349,1.25e-18,19;CL:0000136,2.68e-16,15;CL:0002580,8.77e-15,3;CL:0002615,3.17e-14,3;CL:0002581,1.31e-11,1;CL:0002616,2.68e-11,1;CL:0002537,1.08e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.50e-18!6;UBERON:0002358!6.50e-18!6;UBERON:0003684!6.50e-18!6;UBERON:0001178!6.50e-18!6;UBERON:0005631!1.01e-15!14;UBERON:0000158!1.01e-15!14;UBERON:0004457!6.39e-15!12;UBERON:0000042!6.39e-15!12;UBERON:0004923!1.31e-13!57;UBERON:0000305!2.98e-10!7;UBERON:0000478!3.17e-10!24;UBERON:0000310!5.10e-10!10;UBERON:0001443!4.92e-09!11;UBERON:0000043!5.00e-09!3;UBERON:0004871!6.45e-09!8;UBERON:0001987!9.61e-08!4;UBERON:0004340!9.61e-08!4;UBERON:0003124!3.00e-07!7;UBERON:0005406!3.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.33e-41;6!UBERON:0002358;3.33e-41;6!UBERON:0003684;3.33e-41;6!UBERON:0001178;3.33e-41;6!UBERON:0004457;4.06e-39;9!UBERON:0000042;4.06e-39;9!UBERON:0001987;9.38e-24;4!UBERON:0005406;5.75e-21;2!UBERON:0000310;2.49e-16;10!UBERON:0001443;7.18e-15;11!UBERON:0000478;1.04e-14;24!UBERON:0000305;2.83e-13;7!UBERON:0005631;1.85e-09;10!UBERON:0000158;1.85e-09;10!UBERON:0004923;5.22e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.19e-41,6;UBERON:0002358,2.19e-41,6;UBERON:0003684,2.19e-41,6;UBERON:0001178,2.19e-41,6;UBERON:0004457,2.07e-29,12;UBERON:0000042,2.07e-29,12;UBERON:0005631,2.15e-25,14;UBERON:0000158,2.15e-25,14;UBERON:0001987,9.38e-24,4;UBERON:0004340,9.38e-24,4;UBERON:0005406,3.84e-21,2;UBERON:0004923,6.04e-20,66;UBERON:0000310,2.91e-16,10;UBERON:0001443,8.30e-15,11;UBERON:0000478,1.13e-14,24;UBERON:0003124,7.68e-14,7;UBERON:0000305,3.28e-13,7;UBERON:0004871,1.24e-11,8;UBERON:0009569,1.74e-07,112;UBERON:0004458,6.55e-07,49 | |||
|phase1_expression=1.09007027562334,1.07050261945492,1.69145284915165,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0,0,2.09340350391728,2.62129646556207,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.506328996723799,0.876933046450788,0.252433774244115,0,0.484938170456436,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.553107505625109,0,0,0,0,0,0,4.24378600024763,8.32177197552485,4.83824469327489,5.70647957983187,0.306923946576125,5.05188169979532,3.45975702990393,1.53512174720011,2.89537058058494,4.45254199334973,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,1.08647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.328461828212837,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@CLIC3 | |||
}} |
Latest revision as of 14:52, 16 September 2015
Short description: | p9@CLIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CLIC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_ENST00000480181_5end |
EntrezGene: | CLIC3 |
HGNC: | 2064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.96e-31 | 3 |
omentum preadipocyte | 1.22e-30 | 3 |
preadipocyte | 4.84e-30 | 12 |
adipocyte of breast | 2.59e-20 | 2 |
extraembryonic cell | 1.25e-18 | 19 |
fat cell | 2.68e-16 | 15 |
preadipocyte of the breast | 8.77e-15 | 3 |
adipocyte of omentum tissue | 3.17e-14 | 3 |
perirenal preadipocyte | 1.31e-11 | 1 |
perirenal adipocyte cell | 2.68e-11 | 1 |
amnion mesenchymal stem cell | 1.08e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.19e-41 | 6 |
peritoneum | 2.19e-41 | 6 |
abdominal cavity | 2.19e-41 | 6 |
visceral peritoneum | 2.19e-41 | 6 |
cavity lining | 2.07e-29 | 12 |
serous membrane | 2.07e-29 | 12 |
extraembryonic membrane | 2.15e-25 | 14 |
membranous layer | 2.15e-25 | 14 |
placenta | 9.38e-24 | 4 |
allantois | 9.38e-24 | 4 |
perirenal fat | 3.84e-21 | 2 |
organ component layer | 6.04e-20 | 66 |
breast | 2.91e-16 | 10 |
chest | 8.30e-15 | 11 |
extraembryonic structure | 1.13e-14 | 24 |
chorion | 7.68e-14 | 7 |
amnion | 3.28e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.24e-11 | 8 |
subdivision of trunk | 1.74e-07 | 112 |
body cavity or lining | 6.55e-07 | 49 |