FFCP PHASE1:Mm9::chr5:27231364..27231415,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13483|HGNC=|MCL_coexpression_id=401|UniProt=Q5U4C2|association_with_transcript=46bp_to_NM_001198886,uc008wtl.2_5end|description=CAGE_peak_5_at_Dpp6_5end|id=chr5:27231364..27231415,+|ontology_enrichment_celltype=CL:0000117!1.38e-15!23;CL:0000337!1.38e-15!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000393!4.53e-07!39;CL:0000211!4.53e-07!39;CL:0000221!4.64e-07!44;CL:0000133!4.64e-07!44;CL:0002319!7.16e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-17,23;CL:0000337,1.13e-17,23;CL:0000540,5.57e-11,33;CL:0000047,5.57e-11,33;CL:0000031,5.57e-11,33;CL:0000404,5.57e-11,33;CL:0000393,3.37e-08,39;CL:0000211,3.37e-08,39;CL:0002319,8.10e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.14e-22!71;UBERON:0003075!6.14e-22!71;UBERON:0007284!6.14e-22!71;UBERON:0000033!6.19e-21!63;UBERON:0001049!2.16e-20!52;UBERON:0005068!2.16e-20!52;UBERON:0006241!2.16e-20!52;UBERON:0007135!2.16e-20!52;UBERON:0004121!6.78e-20!102;UBERON:0000924!6.78e-20!102;UBERON:0006601!6.78e-20!102;UBERON:0000073!6.92e-19!75;UBERON:0001016!6.92e-19!75;UBERON:0001017!1.13e-18!73;UBERON:0005743!1.13e-18!73;UBERON:0000955!2.04e-18!50;UBERON:0006238!2.04e-18!50;UBERON:0002616!4.20e-18!49;UBERON:0003056!4.66e-17!49;UBERON:0002020!5.22e-14!34;UBERON:0003080!8.53e-14!40;UBERON:0002780!4.63e-13!39;UBERON:0001890!4.63e-13!39;UBERON:0006240!4.63e-13!39;UBERON:0002791!1.93e-10!29;UBERON:0003528!1.93e-10!29;UBERON:0001893!1.93e-10!29;UBERON:0000153!7.16e-10!94;UBERON:0007811!1.05e-09!86;UBERON:0003076!1.54e-07!12;UBERON:0003057!1.54e-07!12;UBERON:0002420!6.75e-07!8;UBERON:0007245!6.75e-07!8;UBERON:0010009!6.75e-07!8;UBERON:0010011!6.75e-07!8;UBERON:0000454!6.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.78e-22,54;UBERON:0002346,1.15e-21,64;UBERON:0003075,1.15e-21,64;UBERON:0007284,1.15e-21,64;UBERON:0001049,1.86e-20,52;UBERON:0005068,1.86e-20,52;UBERON:0006241,1.86e-20,52;UBERON:0007135,1.86e-20,52;UBERON:0001017,1.13e-19,73;UBERON:0001016,9.87e-19,75;UBERON:0010371,5.24e-18,73;UBERON:0004121,2.19e-17,95;UBERON:0000924,2.19e-17,95;UBERON:0006601,2.19e-17,95;UBERON:0002020,3.74e-16,34;UBERON:0000955,2.75e-15,47;UBERON:0006238,2.75e-15,47;UBERON:0003056,3.18e-15,49;UBERON:0002616,7.06e-15,46;UBERON:0010314,1.50e-12,92;UBERON:0003080,1.88e-12,40;UBERON:0002780,1.44e-11,39;UBERON:0001890,1.44e-11,39;UBERON:0006240,1.44e-11,39;UBERON:0003528,2.01e-11,29;UBERON:0002791,2.01e-11,29;UBERON:0001893,2.01e-11,29;UBERON:0003076,1.86e-09,12;UBERON:0003057,1.86e-09,12;UBERON:0002420,4.41e-09,8;UBERON:0007245,4.41e-09,8;UBERON:0010009,4.41e-09,8;UBERON:0010011,4.41e-09,8;UBERON:0000454,4.41e-09,8;UBERON:0002240,8.54e-08,6;UBERON:0005174,8.54e-08,6;UBERON:0001137,8.54e-08,6;UBERON:0001948,7.42e-07,5;UBERON:0002315,7.42e-07,5|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.91350658212029,12.6957835025288,10.775133859605,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.420649922702764,12.5686433137674,11.7060326704355,3.1847607795888,3.92966431174769,6.43453150627015,17.6185409599022,7.40586560894089,12.2885226604995,8.96826756565318,9.33173964744578,6.77187381723788,7.81712397203867,14.069065250792,7.79271063661732,12.6690291753677,13.0981946335175,11.183966749518,0.151452386666368,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0,0.520455980298408,0.608930956624282,0.230615497256059,1.20578112442098,1.17588707135705,0,0,0,0,1.13236794963186,0.662524555381181,0,0,28.1069565131085,19.2690970268379,0,0,0,0,13.3313669070292,3.66000482254901,8.29318723944905,3.65031072403781,2.55715457330331,13.2984348518118,9.08551073179443,0.101839363850316,0,0.758168275301024,0.420883711772948,0.520481771850815,1.83921683546778,1.44049703844279,1.80845781402858,2.99360596265843,2.94661556655154,2.81105173679186,2.06962696591213,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,5.04232600658494,0,0,0,0,0,0,1.11189021922435,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0,0.571242563048644,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,8.99083303931635,8.90808818100744,0,1.51482556322624,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,1.28528526568723,0.851640511249612,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,1.24138163549592,0.535106452806212,1.97458824722545,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0.361877549568935,0,0.328281799490123,0,8.71498919449395,0,1.44470807574256,0.925972636848558,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,2.86447756719698,1.20297227640581,4.11049511862385,2.2661816921691,1.35004500046361,1.80128481289688,1.35942722695261,1.55328093525546,0,0.798049746802062,2.39027048055788,1.94485373654635,1.67690530102386,1.65459157605013,2.66696073361938,1.85431551515005,3.53011130550997,2.27427490587418,2.28131369901216,3.9611531691076,1.591905626988,1.92075457214608,2.64203157195821,2.38146845641537,2.31768651889711,2.12200142510076,4.53294490883637,3.38557516309114,3.08582327146874,2.12970967391205,3.09967046931517,2.90692833264657,3.48204707536723,2.28459441307527,3.29270351170991,1.57841826862706,3.39510284614654,1.12228454331548,3.6776855618494,2.1670986122624,2.45538625901814,2.78886314134739,3.47231899766054,4.24677982494508,2.57324769289949,3.22306581072447,0.956441660344217,1.10295709559758,2.31867835620421|short_description=p5@Dpp6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13483 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=Q5U4C2 | |||
|association_with_transcript=46bp_to_NM_001198886,uc008wtl.2_5end | |||
|cluster_id=chr5:27231364..27231415,+ | |||
|description=CAGE_peak_5_at_Dpp6_5end | |||
|id=chr5:27231364..27231415,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-15!23;CL:0000337!1.38e-15!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000393!4.53e-07!39;CL:0000211!4.53e-07!39;CL:0000221!4.64e-07!44;CL:0000133!4.64e-07!44;CL:0002319!7.16e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-17,23;CL:0000337,1.13e-17,23;CL:0000540,5.57e-11,33;CL:0000047,5.57e-11,33;CL:0000031,5.57e-11,33;CL:0000404,5.57e-11,33;CL:0000393,3.37e-08,39;CL:0000211,3.37e-08,39;CL:0002319,8.10e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.14e-22!71;UBERON:0003075!6.14e-22!71;UBERON:0007284!6.14e-22!71;UBERON:0000033!6.19e-21!63;UBERON:0001049!2.16e-20!52;UBERON:0005068!2.16e-20!52;UBERON:0006241!2.16e-20!52;UBERON:0007135!2.16e-20!52;UBERON:0004121!6.78e-20!102;UBERON:0000924!6.78e-20!102;UBERON:0006601!6.78e-20!102;UBERON:0000073!6.92e-19!75;UBERON:0001016!6.92e-19!75;UBERON:0001017!1.13e-18!73;UBERON:0005743!1.13e-18!73;UBERON:0000955!2.04e-18!50;UBERON:0006238!2.04e-18!50;UBERON:0002616!4.20e-18!49;UBERON:0003056!4.66e-17!49;UBERON:0002020!5.22e-14!34;UBERON:0003080!8.53e-14!40;UBERON:0002780!4.63e-13!39;UBERON:0001890!4.63e-13!39;UBERON:0006240!4.63e-13!39;UBERON:0002791!1.93e-10!29;UBERON:0003528!1.93e-10!29;UBERON:0001893!1.93e-10!29;UBERON:0000153!7.16e-10!94;UBERON:0007811!1.05e-09!86;UBERON:0003076!1.54e-07!12;UBERON:0003057!1.54e-07!12;UBERON:0002420!6.75e-07!8;UBERON:0007245!6.75e-07!8;UBERON:0010009!6.75e-07!8;UBERON:0010011!6.75e-07!8;UBERON:0000454!6.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.78e-22,54;UBERON:0002346,1.15e-21,64;UBERON:0003075,1.15e-21,64;UBERON:0007284,1.15e-21,64;UBERON:0001049,1.86e-20,52;UBERON:0005068,1.86e-20,52;UBERON:0006241,1.86e-20,52;UBERON:0007135,1.86e-20,52;UBERON:0001017,1.13e-19,73;UBERON:0001016,9.87e-19,75;UBERON:0010371,5.24e-18,73;UBERON:0004121,2.19e-17,95;UBERON:0000924,2.19e-17,95;UBERON:0006601,2.19e-17,95;UBERON:0002020,3.74e-16,34;UBERON:0000955,2.75e-15,47;UBERON:0006238,2.75e-15,47;UBERON:0003056,3.18e-15,49;UBERON:0002616,7.06e-15,46;UBERON:0010314,1.50e-12,92;UBERON:0003080,1.88e-12,40;UBERON:0002780,1.44e-11,39;UBERON:0001890,1.44e-11,39;UBERON:0006240,1.44e-11,39;UBERON:0003528,2.01e-11,29;UBERON:0002791,2.01e-11,29;UBERON:0001893,2.01e-11,29;UBERON:0003076,1.86e-09,12;UBERON:0003057,1.86e-09,12;UBERON:0002420,4.41e-09,8;UBERON:0007245,4.41e-09,8;UBERON:0010009,4.41e-09,8;UBERON:0010011,4.41e-09,8;UBERON:0000454,4.41e-09,8;UBERON:0002240,8.54e-08,6;UBERON:0005174,8.54e-08,6;UBERON:0001137,8.54e-08,6;UBERON:0001948,7.42e-07,5;UBERON:0002315,7.42e-07,5 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.91350658212029,12.6957835025288,10.775133859605,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.420649922702764,12.5686433137674,11.7060326704355,3.1847607795888,3.92966431174769,6.43453150627015,17.6185409599022,7.40586560894089,12.2885226604995,8.96826756565318,9.33173964744578,6.77187381723788,7.81712397203867,14.069065250792,7.79271063661732,12.6690291753677,13.0981946335175,11.183966749518,0.151452386666368,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0,0.520455980298408,0.608930956624282,0.230615497256059,1.20578112442098,1.17588707135705,0,0,0,0,1.13236794963186,0.662524555381181,0,0,28.1069565131085,19.2690970268379,0,0,0,0,13.3313669070292,3.66000482254901,8.29318723944905,3.65031072403781,2.55715457330331,13.2984348518118,9.08551073179443,0.101839363850316,0,0.758168275301024,0.420883711772948,0.520481771850815,1.83921683546778,1.44049703844279,1.80845781402858,2.99360596265843,2.94661556655154,2.81105173679186,2.06962696591213,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,5.04232600658494,0,0,0,0,0,0,1.11189021922435,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0,0.571242563048644,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,8.99083303931635,8.90808818100744,0,1.51482556322624,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,1.28528526568723,0.851640511249612,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,1.24138163549592,0.535106452806212,1.97458824722545,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0.361877549568935,0,0.328281799490123,0,8.71498919449395,0,1.44470807574256,0.925972636848558,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,2.86447756719698,1.20297227640581,4.11049511862385,2.2661816921691,1.35004500046361,1.80128481289688,1.35942722695261,1.55328093525546,0,0.798049746802062,2.39027048055788,1.94485373654635,1.67690530102386,1.65459157605013,2.66696073361938,1.85431551515005,3.53011130550997,2.27427490587418,2.28131369901216,3.9611531691076,1.591905626988,1.92075457214608,2.64203157195821,2.38146845641537,2.31768651889711,2.12200142510076,4.53294490883637,3.38557516309114,3.08582327146874,2.12970967391205,3.09967046931517,2.90692833264657,3.48204707536723,2.28459441307527,3.29270351170991,1.57841826862706,3.39510284614654,1.12228454331548,3.6776855618494,2.1670986122624,2.45538625901814,2.78886314134739,3.47231899766054,4.24677982494508,2.57324769289949,3.22306581072447,0.956441660344217,1.10295709559758,2.31867835620421 | |||
|short_description=p5@Dpp6 | |||
}} |
Latest revision as of 21:14, 25 September 2015
Short description: | p5@Dpp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dpp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 46bp_to_NM_001198886, uc008wtl.2_5end |
EntrezGene: | Dpp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-17 | 23 |
neuron | 5.57e-11 | 33 |
neuronal stem cell | 5.57e-11 | 33 |
neuroblast | 5.57e-11 | 33 |
electrically signaling cell | 5.57e-11 | 33 |
electrically responsive cell | 3.37e-08 | 39 |
electrically active cell | 3.37e-08 | 39 |
neural cell | 8.10e-07 | 43 |