FFCP PHASE1:Mm9::chr5:151062497..151062511,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=320365|HGNC=|MCL_coexpression_id=401|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0|association_with_transcript=0bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end|description=CAGE_peak_7_at_Fry_5end|id=chr5:151062497..151062511,+|ontology_enrichment_celltype=CL:0000540!7.67e-14!33;CL:0000047!7.67e-14!33;CL:0000031!7.67e-14!33;CL:0000404!7.67e-14!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000221!9.56e-09!44;CL:0000133!9.56e-09!44;CL:0002319!1.16e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-18,23;CL:0000337,6.32e-18,23;CL:0000540,1.33e-13,33;CL:0000047,1.33e-13,33;CL:0000031,1.33e-13,33;CL:0000404,1.33e-13,33;CL:0000393,1.15e-10,39;CL:0000211,1.15e-10,39;CL:0002319,3.52e-09,43;CL:0000221,7.47e-09,44;CL:0000133,7.47e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.14e-20!73;UBERON:0005743!2.14e-20!73;UBERON:0000073!1.19e-19!75;UBERON:0001016!1.19e-19!75;UBERON:0004121!1.97e-19!102;UBERON:0000924!1.97e-19!102;UBERON:0006601!1.97e-19!102;UBERON:0002346!1.80e-18!71;UBERON:0003075!1.80e-18!71;UBERON:0007284!1.80e-18!71;UBERON:0000033!1.99e-15!63;UBERON:0001049!2.26e-15!52;UBERON:0005068!2.26e-15!52;UBERON:0006241!2.26e-15!52;UBERON:0007135!2.26e-15!52;UBERON:0000955!1.34e-13!50;UBERON:0006238!1.34e-13!50;UBERON:0002616!5.13e-13!49;UBERON:0002020!9.99e-13!34;UBERON:0003056!1.27e-11!49;UBERON:0003080!5.91e-10!40;UBERON:0002780!2.31e-09!39;UBERON:0001890!2.31e-09!39;UBERON:0006240!2.31e-09!39;UBERON:0002791!2.96e-09!29;UBERON:0003528!2.96e-09!29;UBERON:0001893!2.96e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-21,73;UBERON:0004121,6.39e-21,95;UBERON:0000924,6.39e-21,95;UBERON:0006601,6.39e-21,95;UBERON:0001016,7.41e-21,75;UBERON:0002346,1.12e-20,64;UBERON:0003075,1.12e-20,64;UBERON:0007284,1.12e-20,64;UBERON:0000073,4.12e-20,54;UBERON:0001049,3.88e-18,52;UBERON:0005068,3.88e-18,52;UBERON:0006241,3.88e-18,52;UBERON:0007135,3.88e-18,52;UBERON:0010371,6.50e-17,73;UBERON:0002020,2.29e-14,34;UBERON:0003076,1.94e-13,12;UBERON:0003057,1.94e-13,12;UBERON:0000955,1.71e-12,47;UBERON:0006238,1.71e-12,47;UBERON:0010314,2.56e-12,92;UBERON:0002616,1.34e-11,46;UBERON:0003056,8.01e-11,49;UBERON:0002240,1.53e-10,6;UBERON:0005174,1.53e-10,6;UBERON:0001137,1.53e-10,6;UBERON:0001948,2.94e-09,5;UBERON:0002315,2.94e-09,5;UBERON:0003528,9.89e-09,29;UBERON:0002791,9.89e-09,29;UBERON:0001893,9.89e-09,29;UBERON:0003080,1.84e-08,40;UBERON:0002780,1.30e-07,39;UBERON:0001890,1.30e-07,39;UBERON:0006240,1.30e-07,39;UBERON:0002420,2.39e-07,8;UBERON:0007245,2.39e-07,8;UBERON:0010009,2.39e-07,8;UBERON:0010011,2.39e-07,8;UBERON:0000454,2.39e-07,8;UBERON:0002950,6.28e-07,4;UBERON:0001891,6.28e-07,4;UBERON:0009616,6.28e-07,4;UBERON:0010286,6.28e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,3.42781181284564,3.75476519617743,0.367472397644862,0.383381884072945,0,1.10115880999389,2.93680877595932,2.61131106535614,4.2203612073662,4.29991924931325,6.77187381723788,3.35019598801657,2.25105044012672,2.29197371665215,5.59794312399969,7.54569908235246,5.96478226640962,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,10.5401086924157,6.91174132484402,0,0,0,0,3.2953940669061,0.915001205637253,0.628271760564322,2.78118912307642,2.04572365864264,2.49345653471472,3.89379031362618,0.611036183101898,0.373220911830279,1.0108910337347,0.210441855886474,0,0,0.720248519221397,1.35634336052144,1.42876648217788,1.40925092313335,1.03071897015702,1.55222022443409,0,0.189106080167819,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.493679549740441,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,1.64647379806855,0.330418782983798,0,0.426576501070468,0.696710015581316,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0.164698954724011,1.00534083520108,0.198956472041151,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0,0.280543279561274,0.316182685621286,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.81308047821288,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,1.18586333383957,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0,0.539457385539283,0.165306911450672,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,3.0215755895588,0.675022500231806,1.35096360967266,1.81256963593682,0,0,1.19707462020309,0.853668028770671,1.21553358534147,1.46729213839588,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0,1.01391719956096,1.13175804831646,0.749132059759059,1.28050304809739,0.861532034334199,0.952587382566147,0.463537303779422,0.77163688185482,1.23625770240992,0.735994600671987,1.02860775715625,1.77475806159337,0.476872379894642,1.30811774969096,1.12931256498397,0.930760686808441,0.182927972872773,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.929621047115796,0.192906610981141,1.99848462350357,1.16965804222704,0.859484216193193,1.14772999241306,0.882365676478062,1.39120701372253|short_description=p7@Fry}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320365 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0 | |||
|association_with_transcript=0bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end | |||
|cluster_id=chr5:151062497..151062511,+ | |||
|description=CAGE_peak_7_at_Fry_5end | |||
|id=chr5:151062497..151062511,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.67e-14!33;CL:0000047!7.67e-14!33;CL:0000031!7.67e-14!33;CL:0000404!7.67e-14!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000221!9.56e-09!44;CL:0000133!9.56e-09!44;CL:0002319!1.16e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-18,23;CL:0000337,6.32e-18,23;CL:0000540,1.33e-13,33;CL:0000047,1.33e-13,33;CL:0000031,1.33e-13,33;CL:0000404,1.33e-13,33;CL:0000393,1.15e-10,39;CL:0000211,1.15e-10,39;CL:0002319,3.52e-09,43;CL:0000221,7.47e-09,44;CL:0000133,7.47e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.14e-20!73;UBERON:0005743!2.14e-20!73;UBERON:0000073!1.19e-19!75;UBERON:0001016!1.19e-19!75;UBERON:0004121!1.97e-19!102;UBERON:0000924!1.97e-19!102;UBERON:0006601!1.97e-19!102;UBERON:0002346!1.80e-18!71;UBERON:0003075!1.80e-18!71;UBERON:0007284!1.80e-18!71;UBERON:0000033!1.99e-15!63;UBERON:0001049!2.26e-15!52;UBERON:0005068!2.26e-15!52;UBERON:0006241!2.26e-15!52;UBERON:0007135!2.26e-15!52;UBERON:0000955!1.34e-13!50;UBERON:0006238!1.34e-13!50;UBERON:0002616!5.13e-13!49;UBERON:0002020!9.99e-13!34;UBERON:0003056!1.27e-11!49;UBERON:0003080!5.91e-10!40;UBERON:0002780!2.31e-09!39;UBERON:0001890!2.31e-09!39;UBERON:0006240!2.31e-09!39;UBERON:0002791!2.96e-09!29;UBERON:0003528!2.96e-09!29;UBERON:0001893!2.96e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-21,73;UBERON:0004121,6.39e-21,95;UBERON:0000924,6.39e-21,95;UBERON:0006601,6.39e-21,95;UBERON:0001016,7.41e-21,75;UBERON:0002346,1.12e-20,64;UBERON:0003075,1.12e-20,64;UBERON:0007284,1.12e-20,64;UBERON:0000073,4.12e-20,54;UBERON:0001049,3.88e-18,52;UBERON:0005068,3.88e-18,52;UBERON:0006241,3.88e-18,52;UBERON:0007135,3.88e-18,52;UBERON:0010371,6.50e-17,73;UBERON:0002020,2.29e-14,34;UBERON:0003076,1.94e-13,12;UBERON:0003057,1.94e-13,12;UBERON:0000955,1.71e-12,47;UBERON:0006238,1.71e-12,47;UBERON:0010314,2.56e-12,92;UBERON:0002616,1.34e-11,46;UBERON:0003056,8.01e-11,49;UBERON:0002240,1.53e-10,6;UBERON:0005174,1.53e-10,6;UBERON:0001137,1.53e-10,6;UBERON:0001948,2.94e-09,5;UBERON:0002315,2.94e-09,5;UBERON:0003528,9.89e-09,29;UBERON:0002791,9.89e-09,29;UBERON:0001893,9.89e-09,29;UBERON:0003080,1.84e-08,40;UBERON:0002780,1.30e-07,39;UBERON:0001890,1.30e-07,39;UBERON:0006240,1.30e-07,39;UBERON:0002420,2.39e-07,8;UBERON:0007245,2.39e-07,8;UBERON:0010009,2.39e-07,8;UBERON:0010011,2.39e-07,8;UBERON:0000454,2.39e-07,8;UBERON:0002950,6.28e-07,4;UBERON:0001891,6.28e-07,4;UBERON:0009616,6.28e-07,4;UBERON:0010286,6.28e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,3.42781181284564,3.75476519617743,0.367472397644862,0.383381884072945,0,1.10115880999389,2.93680877595932,2.61131106535614,4.2203612073662,4.29991924931325,6.77187381723788,3.35019598801657,2.25105044012672,2.29197371665215,5.59794312399969,7.54569908235246,5.96478226640962,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,10.5401086924157,6.91174132484402,0,0,0,0,3.2953940669061,0.915001205637253,0.628271760564322,2.78118912307642,2.04572365864264,2.49345653471472,3.89379031362618,0.611036183101898,0.373220911830279,1.0108910337347,0.210441855886474,0,0,0.720248519221397,1.35634336052144,1.42876648217788,1.40925092313335,1.03071897015702,1.55222022443409,0,0.189106080167819,0.527853372491847,0.43839146485515,1.11218899690239,0.348252166522167,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,1.18372367792605,0.590292695242212,0.154267112887378,0.232533944750408,0,0.233530684734339,0.493679549740441,0,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,1.64647379806855,0.330418782983798,0,0.426576501070468,0.696710015581316,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0.164698954724011,1.00534083520108,0.198956472041151,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0,0.280543279561274,0.316182685621286,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.81308047821288,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,1.18586333383957,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0,0.539457385539283,0.165306911450672,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,0.685082519770642,3.0215755895588,0.675022500231806,1.35096360967266,1.81256963593682,0,0,1.19707462020309,0.853668028770671,1.21553358534147,1.46729213839588,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0,1.01391719956096,1.13175804831646,0.749132059759059,1.28050304809739,0.861532034334199,0.952587382566147,0.463537303779422,0.77163688185482,1.23625770240992,0.735994600671987,1.02860775715625,1.77475806159337,0.476872379894642,1.30811774969096,1.12931256498397,0.930760686808441,0.182927972872773,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.929621047115796,0.192906610981141,1.99848462350357,1.16965804222704,0.859484216193193,1.14772999241306,0.882365676478062,1.39120701372253 | |||
|short_description=p7@Fry | |||
}} |
Latest revision as of 19:02, 25 September 2015
Short description: | p7@Fry |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fry_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 0bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end |
EntrezGene: | Fry |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.32e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-18 | 23 |
neuron | 1.33e-13 | 33 |
neuronal stem cell | 1.33e-13 | 33 |
neuroblast | 1.33e-13 | 33 |
electrically signaling cell | 1.33e-13 | 33 |
electrically responsive cell | 1.15e-10 | 39 |
electrically active cell | 1.15e-10 | 39 |
neural cell | 3.52e-09 | 43 |
ectodermal cell | 7.47e-09 | 44 |
neurectodermal cell | 7.47e-09 | 44 |