FFCP PHASE1:Mm9::chr5:137994829..137994836,+: Difference between revisions
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{{FFCP|EntrezGene=83766|HGNC=|MCL_coexpression_id=224|UniProt=F8WI57|association_with_transcript=44bp_to_ENSMUST00000031725_5end|description=CAGE_peak_2_at_Actl6b_5end|id=chr5:137994829..137994836,+|ontology_enrichment_celltype=CL:0000117!1.06e-22!23;CL:0000337!1.06e-22!23;CL:0000540!8.77e-18!33;CL:0000047!8.77e-18!33;CL:0000031!8.77e-18!33;CL:0000404!8.77e-18!33;CL:0000393!1.52e-13!39;CL:0000211!1.52e-13!39;CL:0002319!2.04e-11!43;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0000055!1.39e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.75e-30,23;CL:0000337,3.75e-30,23;CL:0000540,3.09e-20,33;CL:0000047,3.09e-20,33;CL:0000031,3.09e-20,33;CL:0000404,3.09e-20,33;CL:0000393,1.01e-16,39;CL:0000211,1.01e-16,39;CL:0002319,6.34e-15,43;CL:0000221,1.59e-14,44;CL:0000133,1.59e-14,44;CL:0002613,7.39e-13,3;CL:0000120,8.08e-13,3;CL:0002608,1.09e-11,3;CL:0002611,2.51e-08,2;CL:0002321,3.71e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.93e-29!71;UBERON:0003075!1.93e-29!71;UBERON:0007284!1.93e-29!71;UBERON:0001049!8.67e-26!52;UBERON:0005068!8.67e-26!52;UBERON:0006241!8.67e-26!52;UBERON:0007135!8.67e-26!52;UBERON:0001017!9.18e-26!73;UBERON:0005743!9.18e-26!73;UBERON:0000073!1.37e-24!75;UBERON:0001016!1.37e-24!75;UBERON:0000033!2.28e-24!63;UBERON:0003056!6.75e-24!49;UBERON:0004121!2.26e-23!102;UBERON:0000924!2.26e-23!102;UBERON:0006601!2.26e-23!102;UBERON:0002616!2.28e-22!49;UBERON:0000955!1.21e-21!50;UBERON:0006238!1.21e-21!50;UBERON:0002020!3.75e-21!34;UBERON:0003080!1.18e-19!40;UBERON:0002780!5.11e-19!39;UBERON:0001890!5.11e-19!39;UBERON:0006240!5.11e-19!39;UBERON:0002791!2.45e-16!29;UBERON:0003528!2.45e-16!29;UBERON:0001893!2.45e-16!29;UBERON:0007811!1.29e-13!86;UBERON:0000153!3.32e-11!94;UBERON:0000956!1.11e-09!21;UBERON:0001869!1.11e-09!21;UBERON:0000203!1.11e-09!21;UBERON:0002420!1.98e-08!8;UBERON:0007245!1.98e-08!8;UBERON:0010009!1.98e-08!8;UBERON:0010011!1.98e-08!8;UBERON:0000454!1.98e-08!8;UBERON:0002240!3.47e-07!6;UBERON:0005174!3.47e-07!6;UBERON:0001137!3.47e-07!6;UBERON:0002619!5.44e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-21,54;UBERON:0001017,1.87e-21,73;UBERON:0001016,8.73e-21,75;UBERON:0001049,3.95e-20,52;UBERON:0005068,3.95e-20,52;UBERON:0006241,3.95e-20,52;UBERON:0007135,3.95e-20,52;UBERON:0002020,1.72e-16,34;UBERON:0002346,9.62e-16,64;UBERON:0003075,9.62e-16,64;UBERON:0007284,9.62e-16,64;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002616,1.96e-13,46;UBERON:0010371,2.14e-13,73;UBERON:0000955,4.30e-13,47;UBERON:0006238,4.30e-13,47;UBERON:0000369,1.09e-12,5;UBERON:0002435,1.09e-12,5;UBERON:0000204,1.09e-12,5;UBERON:0010082,1.09e-12,5;UBERON:0001948,3.97e-12,5;UBERON:0002315,3.97e-12,5;UBERON:0002780,8.24e-12,39;UBERON:0001890,8.24e-12,39;UBERON:0006240,8.24e-12,39;UBERON:0003080,1.84e-11,40;UBERON:0003076,1.37e-10,12;UBERON:0003057,1.37e-10,12;UBERON:0002240,3.96e-10,6;UBERON:0005174,3.96e-10,6;UBERON:0001137,3.96e-10,6;UBERON:0010314,6.09e-10,92;UBERON:0003528,2.68e-09,29;UBERON:0002791,2.68e-09,29;UBERON:0001893,2.68e-09,29;UBERON:0003056,5.83e-09,49;UBERON:0002256,2.51e-08,2;UBERON:0002420,5.82e-08,8;UBERON:0007245,5.82e-08,8;UBERON:0010009,5.82e-08,8;UBERON:0010011,5.82e-08,8;UBERON:0000454,5.82e-08,8;UBERON:0000025,2.24e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,7.93486468908049,1.90149421051854,0,0,0,0,0,0,0,0.933206510776299,0.540023753326763,0.630974884054146,1.42825492201902,1.32521124570968,1.22490799214954,1.72521847832825,1.83843757322004,1.10115880999389,0.893811366596314,0.307213066512487,3.03338461779446,3.84248103130121,3.12548022334056,0.558365998002762,0.56276261003168,0.916789486660861,1.17851434189467,0.854230084794618,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.449371918214468,0.457500602818626,1.00523481690292,0.521472960576829,0.511430914660661,0.41557608911912,1.1356888414743,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.30140963567143,0.884474488967262,0.768682321709099,0.562210347358373,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0,0,0.214337035031592,0,0.713475270408282,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84130094602871,2.86447756719698,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0.31136204275253,1.99512436700516,0.512200817262403,0.486213434136588,0.838452650511929,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,1.13175804831646,0.280924522409647,0.384150914429216,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p2@Actl6b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83766 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=F8WI57 | |||
|association_with_transcript=44bp_to_ENSMUST00000031725_5end | |||
|cluster_id=chr5:137994829..137994836,+ | |||
|description=CAGE_peak_2_at_Actl6b_5end | |||
|id=chr5:137994829..137994836,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-22!23;CL:0000337!1.06e-22!23;CL:0000540!8.77e-18!33;CL:0000047!8.77e-18!33;CL:0000031!8.77e-18!33;CL:0000404!8.77e-18!33;CL:0000393!1.52e-13!39;CL:0000211!1.52e-13!39;CL:0002319!2.04e-11!43;CL:0000221!5.97e-11!44;CL:0000133!5.97e-11!44;CL:0000055!1.39e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.75e-30,23;CL:0000337,3.75e-30,23;CL:0000540,3.09e-20,33;CL:0000047,3.09e-20,33;CL:0000031,3.09e-20,33;CL:0000404,3.09e-20,33;CL:0000393,1.01e-16,39;CL:0000211,1.01e-16,39;CL:0002319,6.34e-15,43;CL:0000221,1.59e-14,44;CL:0000133,1.59e-14,44;CL:0002613,7.39e-13,3;CL:0000120,8.08e-13,3;CL:0002608,1.09e-11,3;CL:0002611,2.51e-08,2;CL:0002321,3.71e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.93e-29!71;UBERON:0003075!1.93e-29!71;UBERON:0007284!1.93e-29!71;UBERON:0001049!8.67e-26!52;UBERON:0005068!8.67e-26!52;UBERON:0006241!8.67e-26!52;UBERON:0007135!8.67e-26!52;UBERON:0001017!9.18e-26!73;UBERON:0005743!9.18e-26!73;UBERON:0000073!1.37e-24!75;UBERON:0001016!1.37e-24!75;UBERON:0000033!2.28e-24!63;UBERON:0003056!6.75e-24!49;UBERON:0004121!2.26e-23!102;UBERON:0000924!2.26e-23!102;UBERON:0006601!2.26e-23!102;UBERON:0002616!2.28e-22!49;UBERON:0000955!1.21e-21!50;UBERON:0006238!1.21e-21!50;UBERON:0002020!3.75e-21!34;UBERON:0003080!1.18e-19!40;UBERON:0002780!5.11e-19!39;UBERON:0001890!5.11e-19!39;UBERON:0006240!5.11e-19!39;UBERON:0002791!2.45e-16!29;UBERON:0003528!2.45e-16!29;UBERON:0001893!2.45e-16!29;UBERON:0007811!1.29e-13!86;UBERON:0000153!3.32e-11!94;UBERON:0000956!1.11e-09!21;UBERON:0001869!1.11e-09!21;UBERON:0000203!1.11e-09!21;UBERON:0002420!1.98e-08!8;UBERON:0007245!1.98e-08!8;UBERON:0010009!1.98e-08!8;UBERON:0010011!1.98e-08!8;UBERON:0000454!1.98e-08!8;UBERON:0002240!3.47e-07!6;UBERON:0005174!3.47e-07!6;UBERON:0001137!3.47e-07!6;UBERON:0002619!5.44e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-21,54;UBERON:0001017,1.87e-21,73;UBERON:0001016,8.73e-21,75;UBERON:0001049,3.95e-20,52;UBERON:0005068,3.95e-20,52;UBERON:0006241,3.95e-20,52;UBERON:0007135,3.95e-20,52;UBERON:0002020,1.72e-16,34;UBERON:0002346,9.62e-16,64;UBERON:0003075,9.62e-16,64;UBERON:0007284,9.62e-16,64;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002616,1.96e-13,46;UBERON:0010371,2.14e-13,73;UBERON:0000955,4.30e-13,47;UBERON:0006238,4.30e-13,47;UBERON:0000369,1.09e-12,5;UBERON:0002435,1.09e-12,5;UBERON:0000204,1.09e-12,5;UBERON:0010082,1.09e-12,5;UBERON:0001948,3.97e-12,5;UBERON:0002315,3.97e-12,5;UBERON:0002780,8.24e-12,39;UBERON:0001890,8.24e-12,39;UBERON:0006240,8.24e-12,39;UBERON:0003080,1.84e-11,40;UBERON:0003076,1.37e-10,12;UBERON:0003057,1.37e-10,12;UBERON:0002240,3.96e-10,6;UBERON:0005174,3.96e-10,6;UBERON:0001137,3.96e-10,6;UBERON:0010314,6.09e-10,92;UBERON:0003528,2.68e-09,29;UBERON:0002791,2.68e-09,29;UBERON:0001893,2.68e-09,29;UBERON:0003056,5.83e-09,49;UBERON:0002256,2.51e-08,2;UBERON:0002420,5.82e-08,8;UBERON:0007245,5.82e-08,8;UBERON:0010009,5.82e-08,8;UBERON:0010011,5.82e-08,8;UBERON:0000454,5.82e-08,8;UBERON:0000025,2.24e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,7.93486468908049,1.90149421051854,0,0,0,0,0,0,0,0.933206510776299,0.540023753326763,0.630974884054146,1.42825492201902,1.32521124570968,1.22490799214954,1.72521847832825,1.83843757322004,1.10115880999389,0.893811366596314,0.307213066512487,3.03338461779446,3.84248103130121,3.12548022334056,0.558365998002762,0.56276261003168,0.916789486660861,1.17851434189467,0.854230084794618,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.449371918214468,0.457500602818626,1.00523481690292,0.521472960576829,0.511430914660661,0.41557608911912,1.1356888414743,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.30140963567143,0.884474488967262,0.768682321709099,0.562210347358373,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0,0,0.214337035031592,0,0.713475270408282,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84130094602871,2.86447756719698,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0.31136204275253,1.99512436700516,0.512200817262403,0.486213434136588,0.838452650511929,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0.25347929989024,1.13175804831646,0.280924522409647,0.384150914429216,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p2@Actl6b | |||
}} |
Latest revision as of 14:48, 25 September 2015
Short description: | p2@Actl6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Actl6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | 44bp_to_ENSMUST00000031725_5end |
EntrezGene: | Actl6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.75e-30 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-30 | 23 |
neuron | 3.09e-20 | 33 |
neuronal stem cell | 3.09e-20 | 33 |
neuroblast | 3.09e-20 | 33 |
electrically signaling cell | 3.09e-20 | 33 |
electrically responsive cell | 1.01e-16 | 39 |
electrically active cell | 1.01e-16 | 39 |
neural cell | 6.34e-15 | 43 |
ectodermal cell | 1.59e-14 | 44 |
neurectodermal cell | 1.59e-14 | 44 |
striatum neuron | 7.39e-13 | 3 |
granule cell | 8.08e-13 | 3 |
hippocampal neuron | 1.09e-11 | 3 |
neuron of the dorsal spinal cord | 2.51e-08 | 2 |
embryonic cell | 3.71e-08 | 70 |