FFCP PHASE1:Hg19::chr9:107651917..107651931,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=19 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29 | |||
|TSSclassifier=strong | |||
|UniProt=O95477 | |||
|association_with_transcript=-441bp_to_AF165281,AJ012376_5end | |||
|cluster_id=chr9:107651917..107651931,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_11_at_ABCA1_5end | |||
|id=chr9:107651917..107651931,- | |||
|ontology_enrichment_celltype=CL:0000181!5.43e-25!12;CL:0000417!5.43e-25!12;CL:0000668!5.43e-25!12;CL:0000414!5.43e-25!12;CL:0000412!5.43e-25!12;CL:0000182!5.43e-25!12;CL:0002563!8.67e-13!4;CL:0000223!4.17e-12!59;CL:0002253!3.48e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.36e-68;12!CL:0002563;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-68,12;CL:0000223,7.29e-21,58;CL:0002563,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.24e-48;11!UBERON:0009497;4.54e-41;13!UBERON:0001041;3.13e-18;30!UBERON:0003104;1.77e-17;31!CL:0000223;5.26e-14;58 | |||
|ontology_enrichment_disease=DOID:3119!4.27e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:7;3.52e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.56e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.69e-16!19;UBERON:0006925!8.69e-16!19;UBERON:0008836!8.69e-16!19;UBERON:0008835!1.25e-13!22;UBERON:0003894!1.25e-13!22;UBERON:0003929!2.63e-13!54;UBERON:0009854!4.93e-13!23;UBERON:0001242!8.67e-13!4;UBERON:0001262!8.67e-13!4;UBERON:0004786!8.67e-13!4;UBERON:0004808!8.67e-13!4;UBERON:0001277!8.67e-13!4;UBERON:0007499!5.51e-12!25;UBERON:0009497!5.51e-12!25;UBERON:0000015!5.51e-12!25;UBERON:0002423!5.51e-12!25;UBERON:0006235!5.51e-12!25;UBERON:0004161!5.51e-12!25;UBERON:0005057!1.61e-11!26;UBERON:0009856!1.61e-11!26;UBERON:0003350!2.04e-10!5;UBERON:0002365!1.20e-09!31;UBERON:0002330!1.20e-09!31;UBERON:0002368!1.57e-08!35;UBERON:0005911!1.84e-08!82;UBERON:0001875!4.98e-07!2;UBERON:0006514!4.98e-07!2;UBERON:0002530!5.88e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.26e-43;19!UBERON:0006925;1.26e-43;19!UBERON:0002423;2.47e-33;25!UBERON:0002365;5.92e-26;31!UBERON:0002330;5.92e-26;31!UBERON:0002368;5.32e-24;33!UBERON:0000949;5.41e-18;43!UBERON:0002417;1.12e-11;58!UBERON:0000916;1.12e-11;58!UBERON:0002530;2.48e-11;57!UBERON:0005172;7.75e-10;52!UBERON:0005173;7.75e-10;52!UBERON:0001242;1.63e-09;4!UBERON:0001262;1.63e-09;4!UBERON:0004786;1.63e-09;4!UBERON:0004808;1.63e-09;4!UBERON:0001277;1.63e-09;4!UBERON:0001007;3.35e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-43,19;UBERON:0006925,1.21e-43,19;UBERON:0008836,1.21e-43,19;UBERON:0008835,8.52e-38,22;UBERON:0003894,8.52e-38,22;UBERON:0009854,3.48e-36,23;UBERON:0007499,2.39e-33,25;UBERON:0009497,2.39e-33,25;UBERON:0000015,2.39e-33,25;UBERON:0002423,2.39e-33,25;UBERON:0006235,2.39e-33,25;UBERON:0004161,2.39e-33,25;UBERON:0009856,4.31e-32,26;UBERON:0002365,5.02e-27,31;UBERON:0002330,5.02e-27,31;UBERON:0002368,5.19e-24,35;UBERON:0003929,2.29e-22,54;UBERON:0000949,8.25e-19,45;UBERON:0005172,9.10e-16,54;UBERON:0005173,9.10e-16,54;UBERON:0005911,6.57e-15,82;UBERON:0002530,1.78e-14,59;UBERON:0002417,3.05e-14,60;UBERON:0000916,3.05e-14,60;UBERON:0004921,2.09e-10,118;UBERON:0001041,5.77e-10,87;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0005177,1.22e-08,101;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0009569,7.95e-08,112;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0003914,1.66e-07,117;UBERON:0005256,3.27e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,3.62402638613229,2.22522817629149,3.50498428041761,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@ABCA1 | |||
}} |
Latest revision as of 23:04, 19 September 2015
Short description: | p11@ABCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ABCA1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -441bp_to_AF165281, AJ012376_5end |
EntrezGene: | ABCA1 |
HGNC: | 29 |
UniProt: | O95477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-68 | 12 |
endodermal cell | 7.29e-21 | 58 |
intestinal epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.56e-14 | 39 |