FFCP PHASE1:Mm9::chr10:80164681..80164731,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:80164681..80164731,-
|short_description=p2@Mob3a
|description=CAGE_peak_2_at_Mob3a_5end
|association_with_transcript=-116bp_to_ENSMUST00000003438,NM_17245...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=208228 | |EntrezGene=208228 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=482 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BSU7 | |UniProt=Q8BSU7 | ||
|association_with_transcript=-116bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end | |||
|cluster_id=chr10:80164681..80164731,- | |||
|description=CAGE_peak_2_at_Mob3a_5end | |||
|id=chr10:80164681..80164731,- | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!5.98e-09!33;CL:0000047!5.98e-09!33;CL:0000031!5.98e-09!33;CL:0000404!5.98e-09!33;CL:0000393!1.29e-08!39;CL:0000211!1.29e-08!39;CL:0002319!3.06e-08!43;CL:0000221!4.96e-08!44;CL:0000133!4.96e-08!44;CL:0000055!1.71e-07!50;CL:0000723!3.49e-07!91;CL:0000048!3.49e-07!91;CL:0000034!3.59e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.76e-15,23;CL:0000337,8.76e-15,23;CL:0000540,1.89e-10,33;CL:0000047,1.89e-10,33;CL:0000031,1.89e-10,33;CL:0000404,1.89e-10,33;CL:0000723,6.01e-10,91;CL:0000048,6.01e-10,91;CL:0000393,8.78e-10,39;CL:0000211,8.78e-10,39;CL:0002319,1.61e-09,43;CL:0000034,3.49e-09,97;CL:0000221,5.18e-09,44;CL:0000133,5.18e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.92e-09!94;UBERON:0002390!1.20e-08!45;UBERON:0003061!1.20e-08!45;UBERON:0007811!2.38e-08!86;UBERON:0002193!2.67e-08!48;UBERON:0002370!7.83e-08!23;UBERON:0000974!7.83e-08!23;UBERON:0004807!7.83e-08!23;UBERON:0005058!7.83e-08!23;UBERON:0003351!7.83e-08!23;UBERON:0009113!7.83e-08!23;UBERON:0003295!7.83e-08!23;UBERON:0009722!7.83e-08!23;UBERON:0005562!7.83e-08!23;UBERON:0007690!7.83e-08!23;UBERON:0003408!2.11e-07!24;UBERON:0004177!2.19e-07!29;UBERON:0006562!4.50e-07!24;UBERON:0001557!4.50e-07!24;UBERON:0001042!4.50e-07!24;UBERON:0008814!4.50e-07!24;UBERON:0009145!4.50e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.16e-10,45;UBERON:0003061,5.16e-10,45;UBERON:0002370,1.80e-09,23;UBERON:0000974,1.80e-09,23;UBERON:0004807,1.80e-09,23;UBERON:0005058,1.80e-09,23;UBERON:0003351,1.80e-09,23;UBERON:0009113,1.80e-09,23;UBERON:0003295,1.80e-09,23;UBERON:0009722,1.80e-09,23;UBERON:0005562,1.80e-09,23;UBERON:0007690,1.80e-09,23;UBERON:0002193,3.50e-09,48;UBERON:0002405,3.50e-09,48;UBERON:0004177,9.41e-09,29;UBERON:0005057,9.41e-09,29;UBERON:0006562,1.04e-08,24;UBERON:0003408,1.04e-08,24;UBERON:0001557,1.04e-08,24;UBERON:0001042,1.04e-08,24;UBERON:0008814,1.04e-08,24;UBERON:0009145,1.04e-08,24;UBERON:0000153,1.30e-07,43;UBERON:0001017,3.40e-07,73;UBERON:0001016,6.05e-07,75;UBERON:0007811,6.73e-07,36;UBERON:0000072,8.08e-07,27 | |||
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| ||
|short_description=p2@Mob3a | |||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p2@Mob3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mob3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:482 |
Association with transcript: | -116bp_to_ENSMUST00000003438, NM_172457, uc007geh.1, uc007gei.1_5end |
EntrezGene: | Mob3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.76e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.76e-15 | 23 |
neuron | 1.89e-10 | 33 |
neuronal stem cell | 1.89e-10 | 33 |
neuroblast | 1.89e-10 | 33 |
electrically signaling cell | 1.89e-10 | 33 |
somatic stem cell | 6.01e-10 | 91 |
multi fate stem cell | 6.01e-10 | 91 |
electrically responsive cell | 8.78e-10 | 39 |
electrically active cell | 8.78e-10 | 39 |
neural cell | 1.61e-09 | 43 |
stem cell | 3.49e-09 | 97 |
ectodermal cell | 5.18e-09 | 44 |
neurectodermal cell | 5.18e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.16e-10 | 45 |
blood island | 5.16e-10 | 45 |
thymus | 1.80e-09 | 23 |
neck | 1.80e-09 | 23 |
respiratory system epithelium | 1.80e-09 | 23 |
hemolymphoid system gland | 1.80e-09 | 23 |
pharyngeal epithelium | 1.80e-09 | 23 |
thymic region | 1.80e-09 | 23 |
pharyngeal gland | 1.80e-09 | 23 |
entire pharyngeal arch endoderm | 1.80e-09 | 23 |
thymus primordium | 1.80e-09 | 23 |
early pharyngeal endoderm | 1.80e-09 | 23 |
hemolymphoid system | 3.50e-09 | 48 |
immune system | 3.50e-09 | 48 |
hemopoietic organ | 9.41e-09 | 29 |
immune organ | 9.41e-09 | 29 |
pharynx | 1.04e-08 | 24 |
gland of gut | 1.04e-08 | 24 |
upper respiratory tract | 1.04e-08 | 24 |
chordate pharynx | 1.04e-08 | 24 |
pharyngeal arch system | 1.04e-08 | 24 |
pharyngeal region of foregut | 1.04e-08 | 24 |
anterior region of body | 1.30e-07 | 43 |
central nervous system | 3.40e-07 | 73 |
nervous system | 6.05e-07 | 75 |
craniocervical region | 6.73e-07 | 36 |
segment of respiratory tract | 8.08e-07 | 27 |