FFCP PHASE1:Mm9::chr5:135089861..135089869,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1348|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135089861..135089869,+|id=chr5:135089861..135089869,+|ontology_enrichment_celltype=CL:0000049!2.07e-09!19;CL:0000988!7.75e-07!32;CL:0002032!7.75e-07!32;CL:0000037!7.75e-07!32;CL:0000566!7.75e-07!32;CL:0000837!7.75e-07!32|ontology_enrichment_celltype_v019_2=CL:0000049,3.25e-20,19;CL:0000988,3.78e-14,32;CL:0002032,3.78e-14,32;CL:0000037,3.78e-14,32;CL:0000837,3.78e-14,32;CL:0002320,6.88e-14,46;CL:0000134,6.88e-14,46;CL:0000219,1.45e-11,54;CL:0000763,4.64e-11,16;CL:0002476,1.36e-10,2;CL:0000839,9.45e-10,13;CL:0000553,1.48e-08,6;CL:0000556,1.48e-08,6;CL:0002092,9.02e-08,3;CL:0002540,9.02e-08,3;CL:0002031,8.07e-07,25;CL:0000557,8.53e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.40e-12!16;UBERON:0002193!3.42e-10!48;UBERON:0001474!4.26e-09!22;UBERON:0004765!4.26e-09!22;UBERON:0001434!4.26e-09!22;UBERON:0002390!2.03e-08!45;UBERON:0003061!2.03e-08!45;UBERON:0002106!9.30e-07!6;UBERON:0004457!9.30e-07!6;UBERON:0000042!9.30e-07!6;UBERON:0004854!9.30e-07!6;UBERON:0009034!9.30e-07!6;UBERON:0002095!9.30e-07!6;UBERON:0004782!9.30e-07!6;UBERON:0003281!9.30e-07!6;UBERON:0009664!9.30e-07!6;UBERON:0002296!9.30e-07!6;UBERON:0005602!9.30e-07!6;UBERON:0001179!9.30e-07!6;UBERON:0006293!9.30e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-19,16;UBERON:0001474,1.46e-17,22;UBERON:0004765,1.46e-17,22;UBERON:0001434,1.46e-17,22;UBERON:0002384,6.88e-14,46;UBERON:0002193,2.55e-13,48;UBERON:0002405,2.55e-13,48;UBERON:0002390,6.68e-12,45;UBERON:0003061,6.68e-12,45;UBERON:0002204,1.06e-11,32;UBERON:0002106,9.32e-08,6;UBERON:0004457,9.32e-08,6;UBERON:0000042,9.32e-08,6;UBERON:0004854,9.32e-08,6;UBERON:0009034,9.32e-08,6;UBERON:0002095,9.32e-08,6;UBERON:0004782,9.32e-08,6;UBERON:0003281,9.32e-08,6;UBERON:0009664,9.32e-08,6;UBERON:0002296,9.32e-08,6;UBERON:0005602,9.32e-08,6;UBERON:0001179,9.32e-08,6;UBERON:0006293,9.32e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,4.57420139769445,3.29074640653773,3.81950686618227,0,0.695036658406197,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,1.45462575940567,0,0,0.41889341362691,1.27728527604296,2.27648736561249,1.19980546198682,1.14363204365758,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,1.40442637462647,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.36696704638282,0.412773735926445,0.185194527369712,0.188368457004691,1.23024804948923,1.14389086603261,0.849892149969277,0.279902904647316,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:135089861..135089869,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1348 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:135089861..135089869,+ | |||
|description=CAGE_peak_at_chr5:135089861..135089869,+ | |||
|id=chr5:135089861..135089869,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.07e-09!19;CL:0000988!7.75e-07!32;CL:0002032!7.75e-07!32;CL:0000037!7.75e-07!32;CL:0000566!7.75e-07!32;CL:0000837!7.75e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.25e-20,19;CL:0000988,3.78e-14,32;CL:0002032,3.78e-14,32;CL:0000037,3.78e-14,32;CL:0000837,3.78e-14,32;CL:0002320,6.88e-14,46;CL:0000134,6.88e-14,46;CL:0000219,1.45e-11,54;CL:0000763,4.64e-11,16;CL:0002476,1.36e-10,2;CL:0000839,9.45e-10,13;CL:0000553,1.48e-08,6;CL:0000556,1.48e-08,6;CL:0002092,9.02e-08,3;CL:0002540,9.02e-08,3;CL:0002031,8.07e-07,25;CL:0000557,8.53e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.40e-12!16;UBERON:0002193!3.42e-10!48;UBERON:0001474!4.26e-09!22;UBERON:0004765!4.26e-09!22;UBERON:0001434!4.26e-09!22;UBERON:0002390!2.03e-08!45;UBERON:0003061!2.03e-08!45;UBERON:0002106!9.30e-07!6;UBERON:0004457!9.30e-07!6;UBERON:0000042!9.30e-07!6;UBERON:0004854!9.30e-07!6;UBERON:0009034!9.30e-07!6;UBERON:0002095!9.30e-07!6;UBERON:0004782!9.30e-07!6;UBERON:0003281!9.30e-07!6;UBERON:0009664!9.30e-07!6;UBERON:0002296!9.30e-07!6;UBERON:0005602!9.30e-07!6;UBERON:0001179!9.30e-07!6;UBERON:0006293!9.30e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-19,16;UBERON:0001474,1.46e-17,22;UBERON:0004765,1.46e-17,22;UBERON:0001434,1.46e-17,22;UBERON:0002384,6.88e-14,46;UBERON:0002193,2.55e-13,48;UBERON:0002405,2.55e-13,48;UBERON:0002390,6.68e-12,45;UBERON:0003061,6.68e-12,45;UBERON:0002204,1.06e-11,32;UBERON:0002106,9.32e-08,6;UBERON:0004457,9.32e-08,6;UBERON:0000042,9.32e-08,6;UBERON:0004854,9.32e-08,6;UBERON:0009034,9.32e-08,6;UBERON:0002095,9.32e-08,6;UBERON:0004782,9.32e-08,6;UBERON:0003281,9.32e-08,6;UBERON:0009664,9.32e-08,6;UBERON:0002296,9.32e-08,6;UBERON:0005602,9.32e-08,6;UBERON:0001179,9.32e-08,6;UBERON:0006293,9.32e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,4.57420139769445,3.29074640653773,3.81950686618227,0,0.695036658406197,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,1.7997994345628,0.988866362566974,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,1.45462575940567,0,0,0.41889341362691,1.27728527604296,2.27648736561249,1.19980546198682,1.14363204365758,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,1.40442637462647,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.36696704638282,0.412773735926445,0.185194527369712,0.188368457004691,1.23024804948923,1.14389086603261,0.849892149969277,0.279902904647316,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:135089861..135089869,+ | |||
}} |
Latest revision as of 09:46, 6 August 2015
Short description: | p@chr5:135089861..135089869, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135089861..135089869, + |
Coexpression cluster: | MCL_coexpression_mm9:1348 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.25e-20 | 19 |
hematopoietic cell | 3.78e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.78e-14 | 32 |
hematopoietic stem cell | 3.78e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.78e-14 | 32 |
connective tissue cell | 6.88e-14 | 46 |
mesenchymal cell | 6.88e-14 | 46 |
motile cell | 1.45e-11 | 54 |
myeloid cell | 4.64e-11 | 16 |
bone marrow macrophage | 1.36e-10 | 2 |
myeloid lineage restricted progenitor cell | 9.45e-10 | 13 |
megakaryocyte progenitor cell | 1.48e-08 | 6 |
megakaryocyte | 1.48e-08 | 6 |
bone marrow cell | 9.02e-08 | 3 |
mesenchymal stem cell of the bone marrow | 9.02e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.07e-07 | 25 |
granulocyte monocyte progenitor cell | 8.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-19 | 16 |
bone element | 1.46e-17 | 22 |
skeletal element | 1.46e-17 | 22 |
skeletal system | 1.46e-17 | 22 |
connective tissue | 6.88e-14 | 46 |
hemolymphoid system | 2.55e-13 | 48 |
immune system | 2.55e-13 | 48 |
hematopoietic system | 6.68e-12 | 45 |
blood island | 6.68e-12 | 45 |
musculoskeletal system | 1.06e-11 | 32 |
spleen | 9.32e-08 | 6 |
cavity lining | 9.32e-08 | 6 |
serous membrane | 9.32e-08 | 6 |
gastrointestinal system mesentery | 9.32e-08 | 6 |
stomach region | 9.32e-08 | 6 |
mesentery | 9.32e-08 | 6 |
gastrointestinal system serosa | 9.32e-08 | 6 |
mesentery of stomach | 9.32e-08 | 6 |
gut mesentery | 9.32e-08 | 6 |
dorsal mesentery | 9.32e-08 | 6 |
dorsal mesogastrium | 9.32e-08 | 6 |
peritoneal cavity | 9.32e-08 | 6 |
spleen primordium | 9.32e-08 | 6 |