FFCP PHASE1:Mm9::chr5:130284995..130285007,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=28|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:130284995..130285007,-|id=chr5:130284995..130285007,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-07,3;CL:0000351,2.51e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.36e-07!102;UBERON:0000924!1.36e-07!102;UBERON:0006601!1.36e-07!102;UBERON:0002020!4.63e-07!34;UBERON:0002346!5.89e-07!71;UBERON:0003075!5.89e-07!71;UBERON:0007284!5.89e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.99e-15,18;UBERON:0001008,4.37e-14,19;UBERON:0002113,8.06e-14,14;UBERON:0003918,8.06e-14,14;UBERON:0011143,8.06e-14,14;UBERON:0005095,8.06e-14,14;UBERON:0007687,8.06e-14,14;UBERON:0002619,1.25e-09,17;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0000489,1.74e-08,21;UBERON:0000956,1.99e-07,21;UBERON:0001869,1.99e-07,21;UBERON:0000203,1.99e-07,21;UBERON:0000358,2.51e-07,3;UBERON:0000307,2.51e-07,3;UBERON:0007010,2.51e-07,3;UBERON:0005172,2.70e-07,49;UBERON:0005173,2.70e-07,49;UBERON:0002417,2.70e-07,49;UBERON:0000916,2.70e-07,49;UBERON:0005631,3.19e-07,3;UBERON:0000478,3.19e-07,3;UBERON:0000158,3.19e-07,3;UBERON:0003104,7.31e-07,61;UBERON:0009142,7.31e-07,61|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0.84473233291,0.936258105287974,0.513653904676515,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0.65407546914134,1.31811709640683,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.898800331555214,0,0.311068836925433,0.810035629990144,0.841299845405528,0.856952953211411,0.883474163806454,0,0,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.883885756421003,0.284743361598206,0.186399445825301,0.908714319998209,0.604572480854284,0.289864488701678,0,2.719885334831,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,1.15307748628029,0,0.117588707135705,1.13099932196708,2.71914464507811,0.722996784599558,0,0,0.220841518460394,0,0,1.46390398505774,1.46612694769419,0,0,0,0.508280908292259,0.599162557619291,0.457500602818626,0.125654352112864,0.521472960576829,1.79000820131231,0.20778804455956,0.811206315338788,0,3.35898820647251,33.1066813548114,102.695625672599,0.910843100738926,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,40.6164292060255,0.431135985865684,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,2.73376933133365,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,1.89667900953082,1.94222471436539,2.25415471346161,1.22190796707189,1.74557238450863,2.31448205638051,0.316182685621286,0.738050739898011,2.98297582898612,3.82531208157582,0.296452627087149,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,1.68824011826692,4.07401362850272,0.575392274901621,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.358794827043824,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.586058432961016,0.491804836130026,0.504941854408746,0,0.780877488593277,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,5.63212099352905,1.48282449604674,0,4.122156323537,0,0.482503399425247,1.55184047204077,0.820704498725306,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0.724752362478018,2.01621004380506,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.233753804363138,0,1.99787358036658,2.69141569828427,3.35769232728157,0,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,1.71868654031819,0.515559547031063,2.05524755931193,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.207574695168353,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.0640251524048693,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,1.37147700954166,0.70990322463735,0.476872379894642,0.145346416632329,0.658765662907314,0.25384382367503,0.914639864363863,0.263069711437843,0.135804113845862,1.12228454331548,0.474540072496697,0.689531376628944,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.463735671240843|short_description=p@chr5:130284995..130285007,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:130284995..130285007,- | |||
|description=CAGE_peak_at_chr5:130284995..130285007,- | |||
|id=chr5:130284995..130285007,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-07,3;CL:0000351,2.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.36e-07!102;UBERON:0000924!1.36e-07!102;UBERON:0006601!1.36e-07!102;UBERON:0002020!4.63e-07!34;UBERON:0002346!5.89e-07!71;UBERON:0003075!5.89e-07!71;UBERON:0007284!5.89e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.99e-15,18;UBERON:0001008,4.37e-14,19;UBERON:0002113,8.06e-14,14;UBERON:0003918,8.06e-14,14;UBERON:0011143,8.06e-14,14;UBERON:0005095,8.06e-14,14;UBERON:0007687,8.06e-14,14;UBERON:0002619,1.25e-09,17;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0000489,1.74e-08,21;UBERON:0000956,1.99e-07,21;UBERON:0001869,1.99e-07,21;UBERON:0000203,1.99e-07,21;UBERON:0000358,2.51e-07,3;UBERON:0000307,2.51e-07,3;UBERON:0007010,2.51e-07,3;UBERON:0005172,2.70e-07,49;UBERON:0005173,2.70e-07,49;UBERON:0002417,2.70e-07,49;UBERON:0000916,2.70e-07,49;UBERON:0005631,3.19e-07,3;UBERON:0000478,3.19e-07,3;UBERON:0000158,3.19e-07,3;UBERON:0003104,7.31e-07,61;UBERON:0009142,7.31e-07,61 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0.84473233291,0.936258105287974,0.513653904676515,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0.42438965179803,0.17008658030214,0,0,0,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.577703239502549,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0.65407546914134,1.31811709640683,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,0.898800331555214,0,0.311068836925433,0.810035629990144,0.841299845405528,0.856952953211411,0.883474163806454,0,0,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.763991238884051,0.883885756421003,0.284743361598206,0.186399445825301,0.908714319998209,0.604572480854284,0.289864488701678,0,2.719885334831,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,1.15307748628029,0,0.117588707135705,1.13099932196708,2.71914464507811,0.722996784599558,0,0,0.220841518460394,0,0,1.46390398505774,1.46612694769419,0,0,0,0.508280908292259,0.599162557619291,0.457500602818626,0.125654352112864,0.521472960576829,1.79000820131231,0.20778804455956,0.811206315338788,0,3.35898820647251,33.1066813548114,102.695625672599,0.910843100738926,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,40.6164292060255,0.431135985865684,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,2.73376933133365,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,1.89667900953082,1.94222471436539,2.25415471346161,1.22190796707189,1.74557238450863,2.31448205638051,0.316182685621286,0.738050739898011,2.98297582898612,3.82531208157582,0.296452627087149,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,1.68824011826692,4.07401362850272,0.575392274901621,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.358794827043824,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.586058432961016,0.491804836130026,0.504941854408746,0,0.780877488593277,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0.304464949114599,5.63212099352905,1.48282449604674,0,4.122156323537,0,0.482503399425247,1.55184047204077,0.820704498725306,0,0.370850604021019,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0.724752362478018,2.01621004380506,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.233753804363138,0,1.99787358036658,2.69141569828427,3.35769232728157,0,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,1.71868654031819,0.515559547031063,2.05524755931193,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,1.03552062350364,0.207574695168353,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.0640251524048693,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,1.37147700954166,0.70990322463735,0.476872379894642,0.145346416632329,0.658765662907314,0.25384382367503,0.914639864363863,0.263069711437843,0.135804113845862,1.12228454331548,0.474540072496697,0.689531376628944,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.463735671240843 | |||
|short_description=p@chr5:130284995..130285007,- | |||
}} |
Latest revision as of 08:43, 6 August 2015
Short description: | p@chr5:130284995..130285007, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:130284995..130285007, - |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-07 | 3 |
trophoblast cell | 2.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 4.99e-15 | 18 |
renal system | 4.37e-14 | 19 |
kidney | 8.06e-14 | 14 |
kidney mesenchyme | 8.06e-14 | 14 |
upper urinary tract | 8.06e-14 | 14 |
kidney rudiment | 8.06e-14 | 14 |
kidney field | 8.06e-14 | 14 |
regional part of cerebral cortex | 1.25e-09 | 17 |
occipital lobe | 1.34e-08 | 10 |
visual cortex | 1.34e-08 | 10 |
neocortex | 1.34e-08 | 10 |
cavitated compound organ | 1.74e-08 | 21 |
cerebral cortex | 1.99e-07 | 21 |
cerebral hemisphere | 1.99e-07 | 21 |
pallium | 1.99e-07 | 21 |
blastocyst | 2.51e-07 | 3 |
blastula | 2.51e-07 | 3 |
cleaving embryo | 2.51e-07 | 3 |
abdomen element | 2.70e-07 | 49 |
abdominal segment element | 2.70e-07 | 49 |
abdominal segment of trunk | 2.70e-07 | 49 |
abdomen | 2.70e-07 | 49 |
extraembryonic membrane | 3.19e-07 | 3 |
extraembryonic structure | 3.19e-07 | 3 |
membranous layer | 3.19e-07 | 3 |
mesenchyme | 7.31e-07 | 61 |
entire embryonic mesenchyme | 7.31e-07 | 61 |